RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 PCDHB13Q9Y5F0 798 aa14.25□□□□□ -0.13
MSH6-215ENST00000622629 GSTTP1A0A1W2PQM5 241 aa14.25□□□□□ -0.13
MSH6-215ENST00000622629 NDUFA10O95299 355 aa14.25□□□□□ -0.13
MSH6-215ENST00000622629 NEFHP12036 1026 aa14.25□□□□□ -0.13
MSH6-215ENST00000622629 PTPAQ15257 358 aa14.25□□□□□ -0.13
MSH6-215ENST00000622629 PRR16Q569H4 304 aa14.25□□□□□ -0.13
MSH6-215ENST00000622629 FAM26FQ5R3K3 315 aa14.25□□□□□ -0.13
MSH6-215ENST00000622629 SFMBT2Q5VUG0 894 aa14.25□□□□□ -0.13
MSH6-215ENST00000622629 KLHL7Q8IXQ5 586 aa14.25□□□□□ -0.13
MSH6-215ENST00000622629 MARCH10Q8NA82 808 aaPredicted RBP14.25□□□□□ -0.13
MSH6-215ENST00000622629 AFAP1L1Q8TED9 768 aa14.25□□□□□ -0.13
MSH6-215ENST00000622629 MTA3Q9BTC8 594 aa14.25□□□□□ -0.13
MSH6-215ENST00000622629 ASIC2Q16515 512 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 ARL6IP4Q66PJ3 421 aaKnown RBP14.24□□□□□ -0.13
MSH6-215ENST00000622629 LARP4BQ92615 738 aaKnown RBP14.24□□□□□ -0.13
MSH6-215ENST00000622629 TMEM47Q9BQJ4 181 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 DDX25Q9UHL0 483 aaKnown RBP14.24□□□□□ -0.13
MSH6-215ENST00000622629 ADAMTSL3P82987 1691 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.24□□□□□ -0.13
MSH6-215ENST00000622629 CCDC172P0C7W6 258 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 EPB41P11171 864 aaKnown RBP14.24□□□□□ -0.13
MSH6-215ENST00000622629 CDK8P49336 464 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 CYP4A11Q02928 519 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 LSM14BQ9BX40 385 aaKnown RBP14.24□□□□□ -0.13
MSH6-215ENST00000622629 GOLGA6BA6NDN3 693 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 KCTD1Q719H9 257 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 TEKT1Q969V4 418 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 DHTKD1Q96HY7 919 aaPredicted RBP14.24□□□□□ -0.13
MSH6-215ENST00000622629 SPATA31A1Q5TZJ5 1347 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 ATP2C2O75185 946 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 CAMTA2O94983 1202 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 GCNT3O95395 438 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 POLR2FP61218 127 aaKnown RBP14.24□□□□□ -0.13
MSH6-215ENST00000622629 TNNC1P63316 161 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 TRIM58Q8NG06 486 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 KIAA1024Q9UPX6 916 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 PCDHA1Q9Y5I3 950 aa14.24□□□□□ -0.13
MSH6-215ENST00000622629 CEP104O60308 925 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 RCAN1P53805 252 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 TRAF1Q13077 416 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 ZSCAN26Q16670 478 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 NSUN4Q96CB9 384 aaKnown RBP14.23□□□□□ -0.13
MSH6-215ENST00000622629 NAP1L4Q99733 375 aaKnown RBP14.23□□□□□ -0.13
MSH6-215ENST00000622629 ADGRG1Q9Y653 693 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 GOLGA6L10A0A0M3HER8 536 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 CCNE1P24864 410 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 HMGB2P26583 209 aaKnown RBP14.23□□□□□ -0.13
MSH6-215ENST00000622629 CCDC174Q6PII3 467 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 RDH13Q8NBN7 331 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 LMBR1Q8WVP7 490 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 NT5C3AQ9H0P0 336 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 MRPL44Q9H9J2 332 aaKnown RBP14.23□□□□□ -0.13
MSH6-215ENST00000622629 PANK4Q9NVE7 773 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 TLDC2A0PJX2 215 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 CCDC151A5D8V7 595 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 GOLGA6CA6NDK9 693 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 EBAG9O00559 213 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 GOLGA6DP0CG33 693 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 ITPK1Q13572 414 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 RBM26Q5T8P6 1007 aaKnown RBP14.23□□□□□ -0.13
MSH6-215ENST00000622629 SMCR8Q8TEV9 937 aaPredicted RBP14.23□□□□□ -0.13
MSH6-215ENST00000622629 ZCCHC17Q9NP64 241 aaKnown RBP14.23□□□□□ -0.13
MSH6-215ENST00000622629 GOLGA6AQ9NYA3 693 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 SPATA31A6Q5VVP1 1343 aa14.23□□□□□ -0.13
MSH6-215ENST00000622629 DDX39AO00148 427 aaKnown RBP14.22□□□□□ -0.13
MSH6-215ENST00000622629 LAD1O00515 517 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 CXCR5P32302 372 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 GYS2P54840 703 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 SP4Q02446 784 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 UBE2SQ16763 222 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 AK8Q96MA6 479 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 SMIM23A6NLE4 172 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 CTIFO43310 598 aaKnown RBP14.22□□□□□ -0.13
MSH6-215ENST00000622629 SERPINB2P05120 415 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 NYAP1Q6ZVC0 841 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 ANKRD7Q92527 254 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 TRIM31Q9BZY9 425 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 ATP2C1P98194 919 aaPredicted RBP14.22□□□□□ -0.13
MSH6-215ENST00000622629 MYCT1Q8N699 235 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 BICD1Q96G01 975 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 ABHD10Q9NUJ1 306 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 STK32BQ9NY57 414 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 SERPINB13Q9UIV8 391 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 RASSF7Q02833 373 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 VPS72Q15906 364 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 TPH2Q8IWU9 490 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 MB21D1Q8N884 522 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 CUEDC2Q9H467 287 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 NARFQ9UHQ1 456 aa14.22□□□□□ -0.13
MSH6-215ENST00000622629 MON2Q7Z3U7 1717 aa14.21□□□□□ -0.13
MSH6-215ENST00000622629 RPS6KA4O75676 772 aa14.21□□□□□ -0.13
MSH6-215ENST00000622629 HPDP32754 393 aaPredicted RBP14.21□□□□□ -0.13
MSH6-215ENST00000622629 NTRK3Q16288 839 aa14.21□□□□□ -0.13
MSH6-215ENST00000622629 CFAP221Q4G0U5 840 aa14.21□□□□□ -0.13
MSH6-215ENST00000622629 PHF20Q9BVI0 1012 aa14.21□□□□□ -0.13
MSH6-215ENST00000622629 GLT8D2Q9H1C3 349 aa14.21□□□□□ -0.13
MSH6-215ENST00000622629 TCHHQ07283 1943 aa14.21□□□□□ -0.13
MSH6-215ENST00000622629 POTEJP0CG39 1038 aa14.21□□□□□ -0.13
MSH6-215ENST00000622629 TOB1P50616 345 aaPredicted RBP14.21□□□□□ -0.13
MSH6-215ENST00000622629 GRAPQ13588 217 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms