RNA–Protein interactions for RNA: ENST00000622062.1

WHAMMP3-204, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3, humanhuman

TSL 1 (best)

Gene WHAMMP3, Length 2,944 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMMP3-204ENST00000622062 TRIM47Q96LD4 638 aa9.51□□□□□ -0.89
WHAMMP3-204ENST00000622062 SRRTQ9BXP5 876 aaKnown RBP9.51□□□□□ -0.89
WHAMMP3-204ENST00000622062 TRIM34Q9BYJ4 488 aa9.51□□□□□ -0.89
WHAMMP3-204ENST00000622062 SLC39A2Q9NP94 309 aa9.51□□□□□ -0.89
WHAMMP3-204ENST00000622062 A0A1B0GUL6 1792 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 GTF2F1P35269 517 aaKnown RBP eCLIP9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 FXR1P51114 621 aaKnown RBP eCLIP9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 ZNF772Q68DY9 489 aaPredicted RBP9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 SH3RF1Q7Z6J0 888 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 CRAMP1Q96RY5 1269 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 WDR24Q96S15 920 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 PDGFDQ9GZP0 370 aaPredicted RBP9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 COA1Q9GZY4 146 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 ZHX3Q9H4I2 956 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 DDTLA6NHG4 134 aaPredicted RBP9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 AKR1B15C9JRZ8 316 aaPredicted RBP9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 RNF225M0QZC1 329 aaPredicted RBP9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 FANCGO15287 622 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 SLC37A4O43826 429 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 OR52Z1P0C646 297 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 HOXA10P31260 410 aaPredicted RBP9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 LONP1P36776 959 aaKnown RBP9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 PDE4DQ08499 809 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 AOC3Q16853 763 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 C2CD5Q86YS7 1000 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 ADGRF4Q8IZF3 695 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 CDK5RAP3Q96JB5 506 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 ZMYND12Q9H0C1 365 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 TDRD3Q9H7E2 651 aaKnown RBP9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 TBC1D7Q9P0N9 293 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 ZHX1Q9UKY1 873 aaPredicted RBP9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 TFR2Q9UP52 801 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 CCDC88AQ3V6T2 1871 aa9.5□□□□□ -0.89
WHAMMP3-204ENST00000622062 KCNJ18B7U540 433 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 NKRFO15226 690 aaKnown RBP eCLIP9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 ABL1P00519 1130 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 TFRCP02786 760 aaKnown RBP9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 CRKP46108 304 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 ETF1P62495 437 aaKnown RBP9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 KCNJ12Q14500 433 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 APOBEC3HQ6NTF7 200 aaKnown RBP9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 NUDT12Q9BQG2 462 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 ADD3Q9UEY8 706 aaKnown RBP9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 SCN7AQ01118 1682 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 A6NJR5 290 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 ARHGAP6O43182 974 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 TTLL1O95922 423 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 HLA-DOAP06340 250 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 STK4Q13043 487 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 LRRC41Q15345 812 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 ZYXQ15942 572 aaKnown RBP9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 ARL6IP4Q66PJ3 421 aaKnown RBP9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 MTERF4Q7Z6M4 381 aaKnown RBP9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 CCDC12Q8WUD4 166 aaPredicted RBP9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 CENPFP49454 3210 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 A0A1B0GTH6 734 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 CLRN2A0PK11 232 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 M0R2N6 131 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 CTIFO43310 598 aaKnown RBP9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 SLU7O95391 586 aaKnown RBP9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 NPR1P16066 1061 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 ALDH1B1P30837 517 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 SLC1A4P43007 532 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 MCM6Q14566 821 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 SEPT2Q15019 361 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 CALCRLQ16602 461 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 ZNF658Q5TYW1 1059 aaPredicted RBP9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 SLC30A10Q6XR72 485 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 TRMT1LQ7Z2T5 733 aaKnown RBP9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 ACRBPQ8NEB7 543 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 MNS1Q8NEH6 495 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 CARD6Q9BX69 1037 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 MRPL44Q9H9J2 332 aaKnown RBP9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 SH3GLB2Q9NR46 395 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 LRWD1Q9UFC0 647 aa9.49□□□□□ -0.89
WHAMMP3-204ENST00000622062 RREB1Q92766 1687 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 SNED1Q8TER0 1413 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 C21orf2O43822 256 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 SHMT1P34896 483 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 ADCY7P51828 1080 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 TMEM139Q8IV31 216 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 REXO1L1PQ8IX06 675 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 CSGALNACT2Q8N6G5 542 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 ANKRD20A12PQ8NF67 263 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 ANKS1AQ92625 1134 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 CCDC94Q9BW85 323 aaPredicted RBP9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 SPZ1Q9BXG8 430 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 JMJD4Q9H9V9 463 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 PPP1R1BQ9UD71 204 aaPredicted RBP9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 CASZ1Q86V15 1759 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 PSDA5PKW4 1024 aaPredicted RBP9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 B4DLN1 442 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 H0YIN7 160 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 ZSCAN12O43309 604 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 PPP1R11O60927 126 aaPredicted RBP9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 GYPCP04921 128 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 EEF2P13639 858 aaKnown RBP9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 KRT9P35527 623 aa9.48□□□□□ -0.89
WHAMMP3-204ENST00000622062 PDE6BP35913 854 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms