RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 FANCBQ8NB91 859 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 SLAIN1Q8ND83 568 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 SMARCC2Q8TAQ2 1214 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 NUP133Q8WUM0 1156 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 INTS4Q96HW7 963 aaKnown RBP8.2□□□□□ -1.1
PSMB3-212ENST00000620309 TRIM47Q96LD4 638 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 NUP88Q99567 741 aaPredicted RBP8.2□□□□□ -1.1
PSMB3-212ENST00000620309 NUDT12Q9BQG2 462 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 SPZ1Q9BXG8 430 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 SLKQ9H2G2 1235 aaPredicted RBP8.2□□□□□ -1.1
PSMB3-212ENST00000620309 MTMR7Q9Y216 660 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 NR2E3Q9Y5X4 410 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 FRMPD2Q68DX3 1309 aaPredicted RBP8.2□□□□□ -1.1
PSMB3-212ENST00000620309 CCDC196A0A1B0GTZ2 297 aa8.19□□□□□ -1.1
PSMB3-212ENST00000620309 SPDYE16A6NNV3 312 aaPredicted RBP8.19□□□□□ -1.1
PSMB3-212ENST00000620309 CYTH3O43739 400 aa8.19□□□□□ -1.1
PSMB3-212ENST00000620309 JAK2O60674 1132 aa8.19□□□□□ -1.1
PSMB3-212ENST00000620309 MYCP01106 439 aaPredicted RBP8.19□□□□□ -1.1
PSMB3-212ENST00000620309 PARP1P09874 1014 aaKnown RBP8.19□□□□□ -1.1
PSMB3-212ENST00000620309 GOLGA8HP0CJ92 632 aa8.19□□□□□ -1.1
PSMB3-212ENST00000620309 IFNAR1P17181 557 aa8.19□□□□□ -1.1
PSMB3-212ENST00000620309 DSG3P32926 999 aa8.19□□□□□ -1.1
PSMB3-212ENST00000620309 CCT2P78371 535 aaKnown RBP8.19□□□□□ -1.1
PSMB3-212ENST00000620309 SYNE3Q6ZMZ3 975 aa8.19□□□□□ -1.1
PSMB3-212ENST00000620309 PLEKHH3Q7Z736 793 aa8.19□□□□□ -1.1
PSMB3-212ENST00000620309 SHCBP1Q8NEM2 672 aa8.19□□□□□ -1.1
PSMB3-212ENST00000620309 KIFC2Q96AC6 838 aa8.19□□□□□ -1.1
PSMB3-212ENST00000620309 P2RX7Q99572 595 aaKnown RBP8.19□□□□□ -1.1
PSMB3-212ENST00000620309 LLPHQ9BRT6 129 aaKnown RBP8.19□□□□□ -1.1
PSMB3-212ENST00000620309 RNF26Q9BY78 433 aaPredicted RBP8.19□□□□□ -1.1
PSMB3-212ENST00000620309 MROH8Q9H579 483 aa8.19□□□□□ -1.1
PSMB3-212ENST00000620309 BIN2Q9UBW5 565 aaPredicted RBP8.19□□□□□ -1.1
PSMB3-212ENST00000620309 SRRDQ9UH36 339 aa8.19□□□□□ -1.1
PSMB3-212ENST00000620309 PPP1R9AQ9ULJ8 1098 aa8.19□□□□□ -1.1
PSMB3-212ENST00000620309 NAP1L2Q9ULW6 460 aaPredicted RBP8.19□□□□□ -1.1
PSMB3-212ENST00000620309 MCM3APO60318 1980 aa8.19□□□□□ -1.1
PSMB3-212ENST00000620309 DOCK3Q8IZD9 2030 aa8.19□□□□□ -1.1
PSMB3-212ENST00000620309 STRNO43815 780 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 DHX16O60231 1041 aaKnown RBP8.18□□□□□ -1.1
PSMB3-212ENST00000620309 PLA2G6O60733 806 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 CDKL5O76039 1030 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 ECM2O94769 699 aaPredicted RBP8.18□□□□□ -1.1
PSMB3-212ENST00000620309 ADD1P35611 737 aaKnown RBP8.18□□□□□ -1.1
PSMB3-212ENST00000620309 DDIT3P35638 169 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 RGS2P41220 211 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 OAZ1P54368 228 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 TRAF1Q13077 416 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 BTNL9Q6UXG8 535 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 KCTD1Q719H9 257 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 NCAPG2Q86XI2 1143 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 CMTR1Q8N1G2 835 aaKnown RBP8.18□□□□□ -1.1
PSMB3-212ENST00000620309 SRBD1Q8N5C6 995 aaKnown RBP8.18□□□□□ -1.1
PSMB3-212ENST00000620309 MTMR8Q96EF0 704 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 LZTS2Q9BRK4 669 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 TEX13BQ9BXU2 312 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 SPATC1LQ9H0A9 340 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 CPVLQ9H3G5 476 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 RIOX1Q9H6W3 641 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 FBXO40Q9UH90 709 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 KIAA1217Q5T5P2 1943 aa8.18□□□□□ -1.1
PSMB3-212ENST00000620309 TMEM232C9JQI7 657 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 KLRF2D3W0D1 207 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 VWA5AO00534 786 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 CPLX1O14810 134 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 FCER1AP12319 257 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 FDPSP14324 419 aaKnown RBP8.17□□□□□ -1.1
PSMB3-212ENST00000620309 CAPN2P17655 700 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 SMARCA1P28370 1054 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 GRK4P32298 578 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 GNAQP50148 359 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 HMGN5P82970 282 aaKnown RBP8.17□□□□□ -1.1
PSMB3-212ENST00000620309 PRKCZQ05513 592 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 IRF5Q13568 498 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 KCTD2Q14681 263 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 SNRNP48Q6IEG0 339 aaKnown RBP8.17□□□□□ -1.1
PSMB3-212ENST00000620309 TTBK2Q6IQ55 1244 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 GPR142Q7Z601 462 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 DPP9Q86TI2 863 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 PHKBQ93100 1093 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 ATG4CQ96DT6 458 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 IPO9Q96P70 1041 aaKnown RBP8.17□□□□□ -1.1
PSMB3-212ENST00000620309 MPHOSPH6Q99547 160 aaKnown RBP8.17□□□□□ -1.1
PSMB3-212ENST00000620309 APBA2Q99767 749 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 RANBP17Q9H2T7 1088 aaKnown RBP8.17□□□□□ -1.1
PSMB3-212ENST00000620309 GPCPD1Q9NPB8 672 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 FBXO28Q9NVF7 368 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 PRR12Q9ULL5 1215 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.17□□□□□ -1.1
PSMB3-212ENST00000620309 WDR81Q562E7 1941 aa8.17□□□□□ -1.1
PSMB3-212ENST00000620309 SLC15A5A6NIM6 579 aa8.16□□□□□ -1.1
PSMB3-212ENST00000620309 PFASO15067 1338 aa8.16□□□□□ -1.1
PSMB3-212ENST00000620309 ADCY3O60266 1144 aa8.16□□□□□ -1.1
PSMB3-212ENST00000620309 PPP1R11O60927 126 aaPredicted RBP8.16□□□□□ -1.1
PSMB3-212ENST00000620309 DTNBO60941 627 aa8.16□□□□□ -1.1
PSMB3-212ENST00000620309 FARP2O94887 1054 aaPredicted RBP8.16□□□□□ -1.1
PSMB3-212ENST00000620309 DEXIO95424 95 aa8.16□□□□□ -1.1
PSMB3-212ENST00000620309 HMGCRP04035 888 aa8.16□□□□□ -1.1
PSMB3-212ENST00000620309 CCL5P13501 91 aa8.16□□□□□ -1.1
PSMB3-212ENST00000620309 GJB2P29033 226 aa8.16□□□□□ -1.1
PSMB3-212ENST00000620309 SLC16A2P36021 539 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms