RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 EDIL3O43854 480 aa19.63■□□□□ 0.73
PCDHGC3-205ENST00000617641 TNNI2P48788 182 aa19.63■□□□□ 0.73
PCDHGC3-205ENST00000617641 JDP2Q8WYK2 163 aa19.63■□□□□ 0.73
PCDHGC3-205ENST00000617641 GMCL1Q96IK5 515 aa19.63■□□□□ 0.73
PCDHGC3-205ENST00000617641 DISC1Q9NRI5 854 aa19.63■□□□□ 0.73
PCDHGC3-205ENST00000617641 DACH1Q9UI36 760 aa19.63■□□□□ 0.73
PCDHGC3-205ENST00000617641 STAT6P42226 847 aa19.63■□□□□ 0.73
PCDHGC3-205ENST00000617641 CLK2P49760 499 aaKnown RBP19.63■□□□□ 0.73
PCDHGC3-205ENST00000617641 SNAP25P60880 206 aa19.63■□□□□ 0.73
PCDHGC3-205ENST00000617641 FANCCQ00597 558 aa19.63■□□□□ 0.73
PCDHGC3-205ENST00000617641 LRMPQ12912 555 aa19.63■□□□□ 0.73
PCDHGC3-205ENST00000617641 NBPF9Q3BBW0 867 aa19.63■□□□□ 0.73
PCDHGC3-205ENST00000617641 FANCLQ9NW38 375 aa19.63■□□□□ 0.73
PCDHGC3-205ENST00000617641 UBA7P41226 1012 aa19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 TRMT44Q8IYL2 757 aaKnown RBP19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 RASSF8Q8NHQ8 419 aa19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 ZBED3Q96IU2 234 aaPredicted RBP19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 GSDMAQ96QA5 445 aa19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 PSTPIP2Q9H939 334 aa19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 WNT10BO00744 389 aa19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 TDP2O95551 362 aa19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 ECE1P42892 770 aa19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 MRPL12P52815 198 aaKnown RBP19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 IKQ13123 557 aaPredicted RBP19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 CUL4BQ13620 913 aa19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 FKBP1CQ5VVH2 108 aa19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 SPICE1Q8N0Z3 855 aa19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 PLIN2Q99541 437 aa19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 CCSER1Q9C0I3 900 aa19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 BCS1LQ9Y276 419 aa19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 PCDHA1Q9Y5I3 950 aa19.62■□□□□ 0.73
PCDHGC3-205ENST00000617641 TMEM232C9JQI7 657 aa19.61■□□□□ 0.73
PCDHGC3-205ENST00000617641 SLC37A4O43826 429 aa19.61■□□□□ 0.73
PCDHGC3-205ENST00000617641 NAALADL2Q58DX5 795 aa19.61■□□□□ 0.73
PCDHGC3-205ENST00000617641 RRAGBQ5VZM2 374 aa19.61■□□□□ 0.73
PCDHGC3-205ENST00000617641 MIGA2Q7L4E1 593 aa19.61■□□□□ 0.73
PCDHGC3-205ENST00000617641 FILIP1Q7Z7B0 1213 aa19.61■□□□□ 0.73
PCDHGC3-205ENST00000617641 MED15Q96RN5 788 aa19.61■□□□□ 0.73
PCDHGC3-205ENST00000617641 MYO1BO43795 1136 aa19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 GTPBP6O43824 516 aaPredicted RBP19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 BMP3P12645 472 aa19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 TECP42680 631 aa19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 ORC2Q13416 577 aaPredicted RBP19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 SMYD4Q8IYR2 804 aaPredicted RBP19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 ACER1Q8TDN7 264 aa19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 CACTINQ8WUQ7 758 aaKnown RBP19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 MYOZ2Q9NPC6 264 aa19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 SCAF8Q9UPN6 1271 aaKnown RBP19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 CD44P16070 742 aaKnown RBP19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 ARID5BQ14865 1188 aa19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 HSP90AA4PQ58FG1 418 aa19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 SYDE2Q5VT97 1194 aa19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 FAM83AQ86UY5 434 aa19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 ZBTB21Q9ULJ3 1066 aa19.6■□□□□ 0.73
PCDHGC3-205ENST00000617641 OFD1O75665 1012 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 CALCRLQ16602 461 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 CABP7Q86V35 215 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 ENOX1Q8TC92 643 aaKnown RBP19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 LRRC15Q8TF66 581 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 DPF2Q92785 391 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 AK8Q96MA6 479 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 MTMR9Q96QG7 549 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 ARHGEF10LQ9HCE6 1279 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 NFE2L3Q9Y4A8 694 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 USP17L15C9J2P7 530 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 USP17L13C9JLJ4 530 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 USP17L11C9JVI0 530 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 USP17L18D6R9N7 530 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 USP17L22D6RA61 530 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 USP17L17D6RBQ6 530 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 USP17L19D6RCP7 530 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 USP17L20D6RJB6 530 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 TXKP42681 527 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 USP17L24Q0WX57 530 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 KIAA1755Q5JYT7 1200 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 KLHL10Q6JEL2 608 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 USP17L6PQ6QN14 398 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 KIAA1524Q8TCG1 905 aa19.59■□□□□ 0.73
PCDHGC3-205ENST00000617641 EGFRP00533 1210 aa19.58■□□□□ 0.73
PCDHGC3-205ENST00000617641 SERPINC1P01008 464 aa19.58■□□□□ 0.73
PCDHGC3-205ENST00000617641 TNIP1Q15025 636 aa19.58■□□□□ 0.73
PCDHGC3-205ENST00000617641 SGIP1Q9BQI5 828 aa19.58■□□□□ 0.73
PCDHGC3-205ENST00000617641 PGAP2Q9UHJ9 254 aa19.58■□□□□ 0.73
PCDHGC3-205ENST00000617641 MYH7BA7E2Y1 1941 aa19.58■□□□□ 0.72
PCDHGC3-205ENST00000617641 TAL1P17542 331 aaPredicted RBP19.58■□□□□ 0.72
PCDHGC3-205ENST00000617641 PLCG1P19174 1290 aa19.58■□□□□ 0.72
PCDHGC3-205ENST00000617641 ERCC5P28715 1186 aaPredicted RBP19.58■□□□□ 0.72
PCDHGC3-205ENST00000617641 RASSF7Q02833 373 aa19.58■□□□□ 0.72
PCDHGC3-205ENST00000617641 NOLC1Q14978 699 aaKnown RBP eCLIP19.58■□□□□ 0.72
PCDHGC3-205ENST00000617641 TBC1D12O60347 775 aa19.57■□□□□ 0.72
PCDHGC3-205ENST00000617641 UBASH3AP57075 661 aa19.57■□□□□ 0.72
PCDHGC3-205ENST00000617641 USH1GQ495M9 461 aa19.57■□□□□ 0.72
PCDHGC3-205ENST00000617641 TMC6Q7Z403 805 aa19.57■□□□□ 0.72
PCDHGC3-205ENST00000617641 IGSF22Q8N9C0 903 aa19.57■□□□□ 0.72
PCDHGC3-205ENST00000617641 AMNQ9BXJ7 453 aa19.57■□□□□ 0.72
PCDHGC3-205ENST00000617641 SYNPO2Q9UMS6 1093 aa19.57■□□□□ 0.72
PCDHGC3-205ENST00000617641 TMX2Q9Y320 296 aa19.57■□□□□ 0.72
PCDHGC3-205ENST00000617641 PPP1R3GB7ZBB8 358 aa19.57■□□□□ 0.72
PCDHGC3-205ENST00000617641 RPN1P04843 607 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms