RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 ZNRF3Q9ULT6 936 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 HSPA1AP0DMV8 641 aaKnown RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 HSPA1BP0DMV9 641 aaKnown RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 CYP4A11Q02928 519 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 SYNE4Q8N205 404 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 GGA3Q9NZ52 723 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 INSRP06213 1382 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 RPS6KA4O75676 772 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 RBM10P98175 930 aaKnown RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 STK38Q15208 465 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 ERCC4Q92889 916 aaPredicted RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 TRIM45Q9H8W5 580 aaPredicted RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 ADGRF5Q8IZF2 1346 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 HOXB7P09629 217 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 AKR1A1P14550 325 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 PPP1R2P41236 205 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 ICA1Q05084 483 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 TCP10Q12799 353 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 IER5Q5VY09 327 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 ANAPC5Q9UJX4 755 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 XYLBO75191 536 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 GJB1P08034 283 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 TNNC1P63316 161 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 METTL13Q8N6R0 699 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 CACTINQ8WUQ7 758 aaKnown RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 NUP85Q9BW27 656 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 MAP3K2Q9Y2U5 619 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 BFSP1Q12934 665 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 AOC3Q16853 763 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 CEP55Q53EZ4 464 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 SNX19Q92543 992 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 LRRC37A3O60309 1634 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 DOCK1Q14185 1865 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 TRPM3Q9HCF6 1732 aaPredicted RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 ZNF804BA4D1E1 1349 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 STARD3Q14849 445 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 TIGD5Q53EQ6 642 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 ARMCX2Q7L311 632 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 NME9Q86XW9 330 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 KIF5AQ12840 1032 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 PROCA1Q8NCQ7 364 aaPredicted RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 GZF1Q9H116 711 aaPredicted RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 MAN1C1Q9NR34 630 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 SPATA31A5Q5VU36 1347 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 SPATA31A7Q8IWB4 1347 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 AARSP49588 968 aaKnown RBP eCLIP3.72□□□□□ -1.81
LPP-220ENST00000617246 UBE3BQ7Z3V4 1068 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 B3GALNT2Q8NCR0 500 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 ORAI2Q96SN7 254 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 BRD9Q9H8M2 597 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 ZSWIM6Q9HCJ5 1215 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 GOLGA6L10A0A0M3HER8 536 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 GOLGA8BA8MQT2 603 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 KINO60870 393 aaKnown RBP3.72□□□□□ -1.81
LPP-220ENST00000617246 ZWINTO95229 277 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 ABCB5Q2M3G0 1257 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 CNNM4Q6P4Q7 775 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 RABEPKQ7Z6M1 372 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 MRPL9Q9BYD2 267 aaKnown RBP3.72□□□□□ -1.81
LPP-220ENST00000617246 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.72□□□□□ -1.815e-7■■■□□ 15.9
LPP-220ENST00000617246 DBR1Q9UK59 544 aaKnown RBP3.72□□□□□ -1.81
LPP-220ENST00000617246 ZKSCAN5Q9Y2L8 839 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 TAF1LQ8IZX4 1826 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 PCP11498 1178 aaKnown RBP3.72□□□□□ -1.81
LPP-220ENST00000617246 ALAS1P13196 640 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.72□□□□□ -1.81
LPP-220ENST00000617246 OSCP1Q8WVF1 389 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 CCDC17Q96LX7 622 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 SLC52A2Q9HAB3 445 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 PCDHB11Q9Y5F2 797 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 SP4Q02446 784 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 KIFAP3Q92845 792 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 IQCGQ9H095 443 aaKnown RBP3.72□□□□□ -1.81
LPP-220ENST00000617246 PLXNB2O15031 1838 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 CBFA2T2O43439 604 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 MIS18BP1Q6P0N0 1132 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 IKBKGQ9Y6K9 419 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 BCAMP50895 628 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 PPFIA1Q13136 1202 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 PUS10Q3MIT2 529 aaKnown RBP3.72□□□□□ -1.81
LPP-220ENST00000617246 BLOC1S2Q6QNY1 142 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 ALG1Q9BT22 464 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 USP40Q9NVE5 1235 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 LAMB2P55268 1798 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 ZSCAN5CA6NGD5 496 aaPredicted RBP3.72□□□□□ -1.81
LPP-220ENST00000617246 STXBP3O00186 592 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 ARL13BQ3SXY8 428 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 ANKRD23Q86SG2 305 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 LZTS2Q9BRK4 669 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 TXNDC16Q9P2K2 825 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 SAE1Q9UBE0 346 aaPredicted RBP3.72□□□□□ -1.81
LPP-220ENST00000617246 TECPR2O15040 1411 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 IFIT3O14879 490 aaKnown RBP3.72□□□□□ -1.81
LPP-220ENST00000617246 FARP2O94887 1054 aaPredicted RBP3.72□□□□□ -1.81
LPP-220ENST00000617246 ZNF165P49910 485 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 SEPT6Q14141 434 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 SESTD1Q86VW0 696 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 DBNDD1Q9H9R9 158 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 FANCEQ9HB96 536 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 FAM184BQ9ULE4 1060 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms