RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 PDCLQ13371 301 aa20.63■□□□□ 0.89
SPAST-203ENST00000615843 HSP90AA5PQ58FG0 334 aa20.63■□□□□ 0.89
SPAST-203ENST00000615843 RSAD2Q8WXG1 361 aa20.63■□□□□ 0.89
SPAST-203ENST00000615843 MAGEF1Q9HAY2 307 aa20.63■□□□□ 0.89
SPAST-203ENST00000615843 FAM26FQ5R3K3 315 aa20.63■□□□□ 0.89
SPAST-203ENST00000615843 ZMYM1Q5SVZ6 1142 aa20.63■□□□□ 0.89
SPAST-203ENST00000615843 APOA5Q6Q788 366 aa20.63■□□□□ 0.89
SPAST-203ENST00000615843 TOGARAM2Q6ZUX3 1019 aa20.63■□□□□ 0.89
SPAST-203ENST00000615843 MAGOHBQ96A72 148 aaKnown RBP20.63■□□□□ 0.89
SPAST-203ENST00000615843 TRIM37O94972 964 aa20.63■□□□□ 0.89
SPAST-203ENST00000615843 SCYL3Q8IZE3 742 aa20.63■□□□□ 0.89
SPAST-203ENST00000615843 IL17REQ8NFR9 667 aa20.63■□□□□ 0.89
SPAST-203ENST00000615843 CABLES1Q8TDN4 633 aa20.63■□□□□ 0.89
SPAST-203ENST00000615843 NHEJ1Q9H9Q4 299 aaPredicted RBP20.63■□□□□ 0.89
SPAST-203ENST00000615843 SCOCQ9UIL1 159 aa20.63■□□□□ 0.89
SPAST-203ENST00000615843 ZNF658Q5TYW1 1059 aaPredicted RBP20.63■□□□□ 0.89
SPAST-203ENST00000615843 ZNF496Q96IT1 587 aaPredicted RBP20.63■□□□□ 0.89
SPAST-203ENST00000615843 DBNLQ9UJU6 430 aaKnown RBP20.63■□□□□ 0.89
SPAST-203ENST00000615843 MFAP3LO75121 409 aa20.62■□□□□ 0.89
SPAST-203ENST00000615843 PLTPP55058 493 aa20.62■□□□□ 0.89
SPAST-203ENST00000615843 PARP10Q53GL7 1025 aa20.62■□□□□ 0.89
SPAST-203ENST00000615843 P2RX5Q93086 422 aa20.62■□□□□ 0.89
SPAST-203ENST00000615843 METTL14Q9HCE5 456 aaKnown RBP20.62■□□□□ 0.89
SPAST-203ENST00000615843 ZBED6P86452 979 aa20.62■□□□□ 0.89
SPAST-203ENST00000615843 STRN3Q13033 797 aa20.62■□□□□ 0.89
SPAST-203ENST00000615843 RAB20Q9NX57 234 aa20.62■□□□□ 0.89
SPAST-203ENST00000615843 RWDD2AQ9UIY3 292 aa20.62■□□□□ 0.89
SPAST-203ENST00000615843 NEK8Q86SG6 692 aa20.62■□□□□ 0.89
SPAST-203ENST00000615843 OSBPL5Q9H0X9 879 aaPredicted RBP20.62■□□□□ 0.89
SPAST-203ENST00000615843 BICRAQ9NZM4 1560 aa20.62■□□□□ 0.89
SPAST-203ENST00000615843 FTCDO95954 541 aa20.62■□□□□ 0.89
SPAST-203ENST00000615843 SERPINB6P35237 376 aa20.62■□□□□ 0.89
SPAST-203ENST00000615843 RNASELQ05823 741 aaKnown RBP20.62■□□□□ 0.89
SPAST-203ENST00000615843 TXLNGQ9NUQ3 528 aa20.61■□□□□ 0.89
SPAST-203ENST00000615843 KIAA0556O60303 1618 aa20.61■□□□□ 0.89
SPAST-203ENST00000615843 FMNL1O95466 1100 aaPredicted RBP20.61■□□□□ 0.89
SPAST-203ENST00000615843 POLE2P56282 527 aa20.61■□□□□ 0.89
SPAST-203ENST00000615843 PPP2R5DQ14738 602 aa20.61■□□□□ 0.89
SPAST-203ENST00000615843 PFDN4Q9NQP4 134 aa20.61■□□□□ 0.89
SPAST-203ENST00000615843 USP17L12C9JPN9 530 aa20.61■□□□□ 0.89
SPAST-203ENST00000615843 USP17L21D6R901 530 aa20.61■□□□□ 0.89
SPAST-203ENST00000615843 EXOC3L4Q17RC7 722 aa20.61■□□□□ 0.89
SPAST-203ENST00000615843 COPRSQ9NQ92 184 aa20.61■□□□□ 0.89
SPAST-203ENST00000615843 PTPN22Q9Y2R2 807 aa20.61■□□□□ 0.89
SPAST-203ENST00000615843 MYOM2P54296 1465 aa20.61■□□□□ 0.89
SPAST-203ENST00000615843 KCNQ3O43525 872 aa20.61■□□□□ 0.89
SPAST-203ENST00000615843 SPZ1Q9BXG8 430 aa20.61■□□□□ 0.89
SPAST-203ENST00000615843 MAN1A1P33908 653 aa20.61■□□□□ 0.89
SPAST-203ENST00000615843 TTLL12Q14166 644 aaPredicted RBP20.61■□□□□ 0.89
SPAST-203ENST00000615843 FBXO41Q8TF61 875 aa20.61■□□□□ 0.89
SPAST-203ENST00000615843 TSPYL2Q9H2G4 693 aaPredicted RBP20.61■□□□□ 0.89
SPAST-203ENST00000615843 CUEDC2Q9H467 287 aa20.61■□□□□ 0.89
SPAST-203ENST00000615843 ARPP21Q9UBL0 812 aaPredicted RBP20.61■□□□□ 0.89
SPAST-203ENST00000615843 NECTIN1Q15223 517 aa20.6■□□□□ 0.89
SPAST-203ENST00000615843 ARHGEF18Q6ZSZ5 1173 aa20.6■□□□□ 0.89
SPAST-203ENST00000615843 MIER3Q7Z3K6 550 aa20.6■□□□□ 0.89
SPAST-203ENST00000615843 GPKOWQ92917 476 aaPredicted RBP eCLIP20.6■□□□□ 0.89
SPAST-203ENST00000615843 NOP53Q9NZM5 478 aaKnown RBP20.6■□□□□ 0.89
SPAST-203ENST00000615843 CYP27A1Q02318 531 aa20.6■□□□□ 0.89
SPAST-203ENST00000615843 GALNT17Q6IS24 598 aa20.6■□□□□ 0.89
SPAST-203ENST00000615843 TBC1D1Q86TI0 1168 aaPredicted RBP20.6■□□□□ 0.89
SPAST-203ENST00000615843 CD19P15391 556 aa20.6■□□□□ 0.89
SPAST-203ENST00000615843 OGFOD1Q8N543 542 aa20.6■□□□□ 0.89
SPAST-203ENST00000615843 CCHCR1Q8TD31 782 aa20.6■□□□□ 0.89
SPAST-203ENST00000615843 ZDHHC9Q9Y397 364 aa20.6■□□□□ 0.89
SPAST-203ENST00000615843 KIF21AQ7Z4S6 1674 aa20.6■□□□□ 0.89
SPAST-203ENST00000615843 POC1B-GALNT4F8VUJ3 575 aa20.6■□□□□ 0.89
SPAST-203ENST00000615843 SLC1A4P43007 532 aa20.6■□□□□ 0.89
SPAST-203ENST00000615843 MAN2A1Q16706 1144 aa20.6■□□□□ 0.89
SPAST-203ENST00000615843 NFU1Q9UMS0 254 aa20.6■□□□□ 0.89
SPAST-203ENST00000615843 DDX39AO00148 427 aaKnown RBP20.59■□□□□ 0.89
SPAST-203ENST00000615843 DDAH1O94760 285 aa20.59■□□□□ 0.89
SPAST-203ENST00000615843 SKIP12755 728 aa20.59■□□□□ 0.89
SPAST-203ENST00000615843 EIF4A3P38919 411 aaKnown RBP20.59■□□□□ 0.89
SPAST-203ENST00000615843 PBKQ96KB5 322 aa20.59■□□□□ 0.89
SPAST-203ENST00000615843 PCDHA12Q9UN75 941 aa20.59■□□□□ 0.89
SPAST-203ENST00000615843 TRAPPC10P48553 1259 aa20.59■□□□□ 0.89
SPAST-203ENST00000615843 ATP8A2Q9NTI2 1148 aa20.59■□□□□ 0.89
SPAST-203ENST00000615843 GGCXP38435 758 aa20.59■□□□□ 0.89
SPAST-203ENST00000615843 ANKRD35Q8N283 1001 aa20.59■□□□□ 0.89
SPAST-203ENST00000615843 PDCD7Q8N8D1 485 aaKnown RBP20.59■□□□□ 0.89
SPAST-203ENST00000615843 PGBD1Q96JS3 809 aa20.59■□□□□ 0.89
SPAST-203ENST00000615843 ADCY1Q08828 1119 aa20.59■□□□□ 0.89
SPAST-203ENST00000615843 TPH2Q8IWU9 490 aa20.59■□□□□ 0.89
SPAST-203ENST00000615843 PCDHA13Q9Y5I0 950 aa20.59■□□□□ 0.89
SPAST-203ENST00000615843 ABCC10Q5T3U5 1492 aa20.58■□□□□ 0.89
SPAST-203ENST00000615843 DAPK3O43293 454 aa20.58■□□□□ 0.89
SPAST-203ENST00000615843 LMNB1P20700 586 aa20.58■□□□□ 0.89
SPAST-203ENST00000615843 SYNMO15061 1565 aa20.58■□□□□ 0.89
SPAST-203ENST00000615843 RIMBP2O15034 1052 aa20.58■□□□□ 0.89
SPAST-203ENST00000615843 ATF7P17544 494 aaPredicted RBP20.58■□□□□ 0.89
SPAST-203ENST00000615843 EIF3BP55884 814 aaKnown RBP20.58■□□□□ 0.89
SPAST-203ENST00000615843 NEK9Q8TD19 979 aa20.58■□□□□ 0.89
SPAST-203ENST00000615843 THEGQ9P2T0 379 aa20.58■□□□□ 0.89
SPAST-203ENST00000615843 WDR7Q9Y4E6 1490 aa20.58■□□□□ 0.88
SPAST-203ENST00000615843 SLCO1A2P46721 670 aa20.58■□□□□ 0.88
SPAST-203ENST00000615843 TMCO4Q5TGY1 634 aa20.58■□□□□ 0.88
SPAST-203ENST00000615843 RNF26Q9BY78 433 aaPredicted RBP20.58■□□□□ 0.88
SPAST-203ENST00000615843 LRRC24Q50LG9 513 aa20.58■□□□□ 0.88
SPAST-203ENST00000615843 GABPB2Q8TAK5 448 aaPredicted RBP20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms