RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 MAFAQ8NHW3 353 aaPredicted RBP12.49□□□□□ -0.41
COL4A1-205ENST00000615732 GTF3C6Q969F1 213 aa12.49□□□□□ -0.41
COL4A1-205ENST00000615732 SEMA6BQ9H3T3 888 aa12.49□□□□□ -0.41
COL4A1-205ENST00000615732 XPNPEP3Q9NQH7 507 aa12.49□□□□□ -0.41
COL4A1-205ENST00000615732 ZNF214Q9UL59 606 aaPredicted RBP12.49□□□□□ -0.41
COL4A1-205ENST00000615732 GSG1L2A8MUP6 293 aa12.48□□□□□ -0.41
COL4A1-205ENST00000615732 NDUFB10O96000 172 aa12.48□□□□□ -0.41
COL4A1-205ENST00000615732 PDIA4P13667 645 aaKnown RBP12.48□□□□□ -0.41
COL4A1-205ENST00000615732 PDCP20941 246 aa12.48□□□□□ -0.41
COL4A1-205ENST00000615732 ITGB8P26012 769 aa12.48□□□□□ -0.41
COL4A1-205ENST00000615732 STAT3P40763 770 aa12.48□□□□□ -0.41
COL4A1-205ENST00000615732 SMAD3P84022 425 aaKnown RBP12.48□□□□□ -0.41
COL4A1-205ENST00000615732 APOBRQ0VD83 1088 aa12.48□□□□□ -0.41
COL4A1-205ENST00000615732 ST3GAL1Q11201 340 aa12.48□□□□□ -0.41
COL4A1-205ENST00000615732 COL9A3Q14050 684 aaPredicted RBP12.48□□□□□ -0.41
COL4A1-205ENST00000615732 C1orf53Q5VUE5 145 aa12.48□□□□□ -0.41
COL4A1-205ENST00000615732 SNRNP48Q6IEG0 339 aaKnown RBP12.48□□□□□ -0.41
COL4A1-205ENST00000615732 CLEC17AQ6ZS10 378 aa12.48□□□□□ -0.41
COL4A1-205ENST00000615732 MYLIPQ8WY64 445 aa12.48□□□□□ -0.41
COL4A1-205ENST00000615732 SLF1Q9BQI6 1058 aa12.48□□□□□ -0.41
COL4A1-205ENST00000615732 KRT23Q9C075 422 aa12.48□□□□□ -0.41
COL4A1-205ENST00000615732 RNF41Q9H4P4 317 aaPredicted RBP12.48□□□□□ -0.41
COL4A1-205ENST00000615732 CNNM2Q9H8M5 875 aa12.48□□□□□ -0.41
COL4A1-205ENST00000615732 MKNK2Q9HBH9 465 aa12.48□□□□□ -0.41
COL4A1-205ENST00000615732 ADAMTS5Q9UNA0 930 aa12.48□□□□□ -0.41
COL4A1-205ENST00000615732 GREB1LQ9C091 1923 aaPredicted RBP12.47□□□□□ -0.41
COL4A1-205ENST00000615732 PLXNA1Q9UIW2 1896 aa12.47□□□□□ -0.41
COL4A1-205ENST00000615732 STX6O43752 255 aa12.47□□□□□ -0.41
COL4A1-205ENST00000615732 PFKFB2O60825 505 aa12.47□□□□□ -0.41
COL4A1-205ENST00000615732 RARBP10826 455 aa12.47□□□□□ -0.41
COL4A1-205ENST00000615732 EPHB4P54760 987 aa12.47□□□□□ -0.41
COL4A1-205ENST00000615732 ZNF792Q3KQV3 632 aa12.47□□□□□ -0.41
COL4A1-205ENST00000615732 MCTP1Q6DN14 999 aa12.47□□□□□ -0.41
COL4A1-205ENST00000615732 CHST3Q7LGC8 479 aa12.47□□□□□ -0.41
COL4A1-205ENST00000615732 LRRC47Q8N1G4 583 aaKnown RBP12.47□□□□□ -0.41
COL4A1-205ENST00000615732 TINF2Q9BSI4 451 aa12.47□□□□□ -0.41
COL4A1-205ENST00000615732 AGXT2Q9BYV1 514 aa12.47□□□□□ -0.41
COL4A1-205ENST00000615732 TOMM22Q9NS69 142 aa12.47□□□□□ -0.41
COL4A1-205ENST00000615732 PHF24Q9UPV7 400 aa12.47□□□□□ -0.41
COL4A1-205ENST00000615732 ZDHHC9Q9Y397 364 aa12.47□□□□□ -0.41
COL4A1-205ENST00000615732 KIF3AQ9Y496 699 aa12.47□□□□□ -0.41
COL4A1-205ENST00000615732 RIPK3Q9Y572 518 aa12.47□□□□□ -0.41
COL4A1-205ENST00000615732 MUC3AQ02505 3323 aa12.47□□□□□ -0.41
COL4A1-205ENST00000615732 VPS37CA5D8V6 355 aaPredicted RBP12.46□□□□□ -0.41
COL4A1-205ENST00000615732 TRAK2O60296 914 aa12.46□□□□□ -0.41
COL4A1-205ENST00000615732 PQBP1O60828 265 aaKnown RBP12.46□□□□□ -0.41
COL4A1-205ENST00000615732 ZSCAN22P10073 491 aaPredicted RBP12.46□□□□□ -0.41
COL4A1-205ENST00000615732 TLE2Q04725 743 aa12.46□□□□□ -0.41
COL4A1-205ENST00000615732 CTDSPL2Q05D32 466 aa12.46□□□□□ -0.41
COL4A1-205ENST00000615732 PPARAQ07869 468 aa12.46□□□□□ -0.41
COL4A1-205ENST00000615732 SKOR2Q2VWA4 1001 aaPredicted RBP12.46□□□□□ -0.41
COL4A1-205ENST00000615732 SBK1Q52WX2 424 aa12.46□□□□□ -0.41
COL4A1-205ENST00000615732 RRP12Q5JTH9 1297 aaKnown RBP12.46□□□□□ -0.41
COL4A1-205ENST00000615732 AKNAD1Q5T1N1 836 aa12.46□□□□□ -0.41
COL4A1-205ENST00000615732 MFSD6Q6ZSS7 791 aa12.46□□□□□ -0.41
COL4A1-205ENST00000615732 CPXCR1Q8N123 301 aa12.46□□□□□ -0.41
COL4A1-205ENST00000615732 FBXL16Q8N461 479 aa12.46□□□□□ -0.41
COL4A1-205ENST00000615732 FAM184AQ8NB25 1140 aa12.46□□□□□ -0.41
COL4A1-205ENST00000615732 STAG1Q8WVM7 1258 aa12.46□□□□□ -0.41
COL4A1-205ENST00000615732 ZNF274Q96GC6 653 aaPredicted RBP12.46□□□□□ -0.41
COL4A1-205ENST00000615732 LLPHQ9BRT6 129 aaKnown RBP12.46□□□□□ -0.41
COL4A1-205ENST00000615732 TEX13BQ9BXU2 312 aa12.46□□□□□ -0.41
COL4A1-205ENST00000615732 CLIP2Q9UDT6 1046 aa12.46□□□□□ -0.41
COL4A1-205ENST00000615732 ZHX1Q9UKY1 873 aaPredicted RBP12.46□□□□□ -0.41
COL4A1-205ENST00000615732 ISY1Q9ULR0 285 aaKnown RBP12.46□□□□□ -0.41
COL4A1-205ENST00000615732 ATP6V1DQ9Y5K8 247 aa12.46□□□□□ -0.41
COL4A1-205ENST00000615732 ZNFX1Q9P2E3 1918 aaKnown RBP12.46□□□□□ -0.42
COL4A1-205ENST00000615732 NEDD4P46934 1319 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 SYNRGQ9UMZ2 1314 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 KLF18A0A0U1RQI7 1052 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 A0A1W2PQ45 241 aaPredicted RBP12.45□□□□□ -0.42
COL4A1-205ENST00000615732 A0A1W2PQY0 241 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 GOLGA8BA8MQT2 603 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 B4E1Z4 1266 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 F5H6K3 240 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 CLTBP09497 229 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 ZNF865P0CJ78 1059 aaPredicted RBP12.45□□□□□ -0.42
COL4A1-205ENST00000615732 AKR1A1P14550 325 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 FOSL2P15408 326 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 SYT1P21579 422 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 HMGN5P82970 282 aaKnown RBP12.45□□□□□ -0.42
COL4A1-205ENST00000615732 KLRC3Q07444 240 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 SCRN1Q12765 414 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 SART3Q15020 963 aaKnown RBP12.45□□□□□ -0.42
COL4A1-205ENST00000615732 LARP1BQ659C4 914 aaKnown RBP12.45□□□□□ -0.42
COL4A1-205ENST00000615732 GIMAP6Q6P9H5 292 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 NFXL1Q6ZNB6 911 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 KIFC2Q96AC6 838 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 CEP95Q96GE4 821 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 TMEM87BQ96K49 555 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 RAVER2Q9HCJ3 691 aaKnown RBP12.45□□□□□ -0.42
COL4A1-205ENST00000615732 NYAP2Q9P242 653 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 NRBP1Q9UHY1 535 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 CNPY2Q9Y2B0 182 aa12.45□□□□□ -0.42
COL4A1-205ENST00000615732 SMCHD1A6NHR9 2005 aa12.44□□□□□ -0.42
COL4A1-205ENST00000615732 IGKV6D-41A0A0C4DH26 115 aa12.44□□□□□ -0.42
COL4A1-205ENST00000615732 MYADML2A6NDP7 307 aa12.44□□□□□ -0.42
COL4A1-205ENST00000615732 SH2B2O14492 632 aaPredicted RBP12.44□□□□□ -0.42
COL4A1-205ENST00000615732 DHX16O60231 1041 aaKnown RBP12.44□□□□□ -0.42
COL4A1-205ENST00000615732 F13A1P00488 732 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms