RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 NFIAQ12857 509 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 ZNF713Q8N859 430 aaPredicted RBP9.91□□□□□ -0.82
VPS11-206ENST00000614944 C17orf50Q8WW18 174 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 YIPF2Q9BWQ6 316 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 INCENPQ9NQS7 918 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 SH3GLB2Q9NR46 395 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 PICK1Q9NRD5 415 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 MTMR4Q9NYA4 1195 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 GPRC5DQ9NZD1 345 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 EME2A4GXA9 379 aaPredicted RBP9.91□□□□□ -0.82
VPS11-206ENST00000614944 MCTP1Q6DN14 999 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 TMEM179Q6ZVK1 233 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 TMTC3Q6ZXV5 915 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 CHST3Q7LGC8 479 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 DYNLL2Q96FJ2 89 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 PLEKHG4BQ96PX9 1271 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 TDRD3Q9H7E2 651 aaKnown RBP9.91□□□□□ -0.82
VPS11-206ENST00000614944 DNAJC18Q9H819 358 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 LMCD1Q9NZU5 365 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 SAP30BPQ9UHR5 308 aaKnown RBP9.91□□□□□ -0.82
VPS11-206ENST00000614944 A0A087WUV0 522 aaPredicted RBP9.91□□□□□ -0.82
VPS11-206ENST00000614944 DEXIO95424 95 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 PNMA6AP0CW24 399 aaPredicted RBP9.91□□□□□ -0.82
VPS11-206ENST00000614944 GMPSP49915 693 aaPredicted RBP9.91□□□□□ -0.82
VPS11-206ENST00000614944 C16orf87Q6PH81 154 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 CRACR2BQ8N4Y2 399 aaPredicted RBP9.91□□□□□ -0.82
VPS11-206ENST00000614944 GMCL1P1Q8NEA9 526 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 EXOC4Q96A65 974 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 BICD1Q96G01 975 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 SPZ1Q9BXG8 430 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 TSPY26PQ9H489 355 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 KAT14Q9H8E8 782 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 GPHNQ9NQX3 736 aaPredicted RBP9.91□□□□□ -0.82
VPS11-206ENST00000614944 PALM3A6NDB9 673 aaPredicted RBP9.9□□□□□ -0.82
VPS11-206ENST00000614944 IPO5O00410 1097 aaKnown RBP9.9□□□□□ -0.82
VPS11-206ENST00000614944 PYGLP06737 847 aa9.9□□□□□ -0.82
VPS11-206ENST00000614944 CDC27P30260 824 aa9.9□□□□□ -0.82
VPS11-206ENST00000614944 GCKP35557 465 aa9.9□□□□□ -0.82
VPS11-206ENST00000614944 LMAN1P49257 510 aa9.9□□□□□ -0.82
VPS11-206ENST00000614944 PDIA5Q14554 519 aa9.9□□□□□ -0.82
VPS11-206ENST00000614944 RRP12Q5JTH9 1297 aaKnown RBP9.9□□□□□ -0.82
VPS11-206ENST00000614944 LARP1BQ659C4 914 aaKnown RBP9.9□□□□□ -0.82
VPS11-206ENST00000614944 LRRC31Q6UY01 552 aa9.9□□□□□ -0.82
VPS11-206ENST00000614944 JPH2Q9BR39 696 aaPredicted RBP9.9□□□□□ -0.82
VPS11-206ENST00000614944 TSPYL2Q9H2G4 693 aaPredicted RBP9.9□□□□□ -0.82
VPS11-206ENST00000614944 TESPA1A2RU30 521 aaPredicted RBP9.9□□□□□ -0.82
VPS11-206ENST00000614944 DDTLA6NHG4 134 aaPredicted RBP9.9□□□□□ -0.82
VPS11-206ENST00000614944 TTLL1O95922 423 aa9.9□□□□□ -0.82
VPS11-206ENST00000614944 SNX1Q13596 522 aa9.9□□□□□ -0.82
VPS11-206ENST00000614944 TRIM42Q8IWZ5 723 aa9.9□□□□□ -0.82
VPS11-206ENST00000614944 ARL10Q8N8L6 244 aa9.9□□□□□ -0.82
VPS11-206ENST00000614944 KANSL2Q9H9L4 492 aa9.9□□□□□ -0.82
VPS11-206ENST00000614944 SENP2Q9HC62 589 aa9.9□□□□□ -0.82
VPS11-206ENST00000614944 PHIPQ8WWQ0 1821 aa9.9□□□□□ -0.83
VPS11-206ENST00000614944 ELP1O95163 1332 aa9.9□□□□□ -0.83
VPS11-206ENST00000614944 SMIM22K7EJ46 135 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 CPLX1O14810 134 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 HNRNPH1P31943 449 aaKnown RBP9.89□□□□□ -0.83
VPS11-206ENST00000614944 SSRP1Q08945 709 aaKnown RBP9.89□□□□□ -0.83
VPS11-206ENST00000614944 PUS10Q3MIT2 529 aaKnown RBP9.89□□□□□ -0.83
VPS11-206ENST00000614944 ASPRV1Q53RT3 343 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 TAX1BP1Q86VP1 789 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 LMBRD1Q9NUN5 540 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 CNOT7Q9UIV1 285 aaKnown RBP9.89□□□□□ -0.83
VPS11-206ENST00000614944 PYCARDQ9ULZ3 195 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 G3BP2Q9UN86 482 aaKnown RBP9.89□□□□□ -0.83
VPS11-206ENST00000614944 H7C1D1 291 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 PLA2G6O60733 806 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 YBX3P16989 372 aaKnown RBP eCLIP9.89□□□□□ -0.83
VPS11-206ENST00000614944 TPP2P29144 1249 aaPredicted RBP9.89□□□□□ -0.83
VPS11-206ENST00000614944 EVX2Q03828 476 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 RESTQ13127 1097 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 PICALMQ13492 652 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 ARHGAP27Q6ZUM4 889 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 BRAPQ7Z569 592 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 TRIM22Q8IYM9 498 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 DCAF4Q8WV16 495 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 TEPSINQ96N21 525 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 TMEM47Q9BQJ4 181 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 PPP1R1BQ9UD71 204 aaPredicted RBP9.89□□□□□ -0.83
VPS11-206ENST00000614944 ZNF112Q9UJU3 913 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 CNTNAP5Q8WYK1 1306 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 ELF2Q15723 593 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 KIF4BQ2VIQ3 1234 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 MICALL2Q8IY33 904 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 PNMA1Q8ND90 353 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 ERO1AQ96HE7 468 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 MCM8Q9UJA3 840 aa9.89□□□□□ -0.83
VPS11-206ENST00000614944 JAK2O60674 1132 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 ZRANB2O95218 330 aaKnown RBP eCLIP9.88□□□□□ -0.83
VPS11-206ENST00000614944 GALNT17Q6IS24 598 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 ZFPM1Q8IX07 1006 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 C3orf20Q8ND61 904 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 PARD3BQ8TEW8 1205 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 ZC3H15Q8WU90 426 aaKnown RBP9.88□□□□□ -0.83
VPS11-206ENST00000614944 GMCL1Q96IK5 515 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 ORC3Q9UBD5 711 aaPredicted RBP9.88□□□□□ -0.83
VPS11-206ENST00000614944 MAD2L2Q9UI95 211 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 PCDHAC2Q9Y5I4 1007 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 ZSCAN9O15535 394 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms