RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 DDR1Q08345 913 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 LONRF2Q1L5Z9 754 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 PIK3AP1Q6ZUJ8 805 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 STAG2Q8N3U4 1231 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 STAMQ92783 540 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 MTRQ99707 1265 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 KBTBD4Q9NVX7 518 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 PPP2R2CQ9Y2T4 447 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 SIPA1L1O43166 1804 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 SPAG1Q07617 926 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 HHIPL2Q6UWX4 724 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 EHD4Q9H223 541 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 ZNF569Q5MCW4 686 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 TYW1BQ6NUM6 668 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 TRIM65Q6PJ69 517 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 TEX2Q8IWB9 1127 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 MICALL1Q8N3F8 863 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 DYNLL2Q96FJ2 89 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 EEF2KMTQ96G04 330 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 EYA3Q99504 573 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 DISC1Q9NRI5 854 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 PSME4Q14997 1843 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 PLSCR1O15162 318 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 GNA11P29992 359 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 NOM1Q5C9Z4 860 aaKnown RBP12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 CAPZA3Q96KX2 299 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 TADA3O75528 432 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 VEGFAP15692 232 aaPredicted RBP12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 TXLNAP40222 546 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 DIXDC1Q155Q3 683 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 ASPRV1Q53RT3 343 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 GOLGA6L1Q8N7Z2 621 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 FBXO41Q8TF61 875 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 RIN2Q8WYP3 895 aaPredicted RBP12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 BAG1Q99933 345 aaPredicted RBP12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 SYNRGQ9UMZ2 1314 aa12.19□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 VWA3AA6NCI4 1184 aa12.18□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 CASP1P29466 404 aa12.18□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 TRIM14Q14142 442 aa12.18□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 TEX11Q8IYF3 940 aa12.18□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 AKT1S1Q96B36 256 aa12.18□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 MTMR8Q96EF0 704 aa12.18□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 USP17L3A6NCW0 530 aa12.18□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 USP17L4A6NCW7 530 aa12.18□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 SOWAHDA6NJG2 315 aa12.18□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 RHOBTB3O94955 611 aa12.18□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 PARP1P09874 1014 aaKnown RBP12.18□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 HDLBPQ00341 1268 aaKnown RBP12.18□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 SF3A3Q12874 501 aaKnown RBP eCLIP12.18□□□□□ -0.468e-8■■■■□ 20.4
SENP3-EIF4A1-201ENST00000614237 NAALADL2Q58DX5 795 aa12.18□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 USP17L1Q7RTZ2 530 aa12.18□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 NOC3LQ8WTT2 800 aaKnown RBP12.18□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 PPEF1O14829 653 aaPredicted RBP12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 ADAMTS3O15072 1205 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 NPR1P16066 1061 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 DTHD1Q6ZMT9 781 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 FLAD1Q8NFF5 587 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 PARP3Q9Y6F1 533 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 ARFGEF1Q9Y6D6 1849 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 KLRF2D3W0D1 207 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 H7C1D1 291 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 AFMP43652 599 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 DNA2P51530 1060 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 MFSD14BQ5SR56 506 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 GSPT2Q8IYD1 628 aaKnown RBP12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 C6orf50Q9HD87 102 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 DAGLAQ9Y4D2 1042 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 CCDC194A0A1B0GVG4 234 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 ALDH1B1P30837 517 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 EP400NLQ6ZTU2 488 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 NLGN1Q8N2Q7 840 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 RRP36Q96EU6 259 aaKnown RBP12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 C7orf25Q9BPX7 421 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 SAMSN1Q9NSI8 373 aaKnown RBP12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 MTMR4Q9NYA4 1195 aa12.17□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 hCG_1642624A0A1W2PR95 340 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 KLRC4O43908 158 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 RPN1P04843 607 aaKnown RBP12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 SRGNP10124 158 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 KCTD19Q17RG1 926 aaPredicted RBP12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 ADSSL1Q8N142 457 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 IGSF22Q8N9C0 903 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 FAM53CQ9NYF3 392 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 TNS1Q9HBL0 1735 aaKnown RBP12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 MATR3P43243 847 aaKnown RBP eCLIP12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 LIG3P49916 1009 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 FXR2P51116 673 aaKnown RBP eCLIP12.16□□□□□ -0.462e-6■■□□□ 14
SENP3-EIF4A1-201ENST00000614237 CHMP4BP1P59074 171 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 TTC31Q49AM3 519 aaPredicted RBP12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 MAPKAPK5Q8IW41 473 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 SMYD4Q8IYR2 804 aaPredicted RBP12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 PROM2Q8N271 834 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 CCDC24Q8N4L8 307 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 GIMAP8Q8ND71 665 aaPredicted RBP12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 MTMR9Q96QG7 549 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 THAP9Q9H5L6 903 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 SYNPO2Q9UMS6 1093 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 TFR2Q9UP52 801 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 A0A1W2PQC6 194 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms