RNA–Protein interactions for RNA: ENST00000613452.1

LINC01138-204, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 1 (best)

Gene LINC01138, Length 1,050 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-204ENST00000613452 ASGR1P07306 291 aa11.33□□□□□ -0.6
LINC01138-204ENST00000613452 C6orf222P0C671 652 aaPredicted RBP11.33□□□□□ -0.6
LINC01138-204ENST00000613452 ALAS1P13196 640 aa11.33□□□□□ -0.6
LINC01138-204ENST00000613452 SDSP20132 328 aa11.33□□□□□ -0.6
LINC01138-204ENST00000613452 CNTN2Q02246 1040 aa11.33□□□□□ -0.6
LINC01138-204ENST00000613452 NUCB1Q02818 461 aa11.33□□□□□ -0.6
LINC01138-204ENST00000613452 CCDC174Q6PII3 467 aa11.33□□□□□ -0.6
LINC01138-204ENST00000613452 Q7L0L9 218 aa11.33□□□□□ -0.6
LINC01138-204ENST00000613452 CHD1LQ86WJ1 897 aa11.33□□□□□ -0.6
LINC01138-204ENST00000613452 SLC43A3Q8NBI5 491 aa11.33□□□□□ -0.6
LINC01138-204ENST00000613452 RGS22Q8NE09 1264 aa11.33□□□□□ -0.6
LINC01138-204ENST00000613452 ANKS1AQ92625 1134 aa11.33□□□□□ -0.6
LINC01138-204ENST00000613452 SEMA6BQ9H3T3 888 aa11.33□□□□□ -0.6
LINC01138-204ENST00000613452 ADD3Q9UEY8 706 aaKnown RBP11.33□□□□□ -0.6
LINC01138-204ENST00000613452 GNEQ9Y223 722 aaKnown RBP11.33□□□□□ -0.6
LINC01138-204ENST00000613452 COL6A3P12111 3177 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 TMEM265A0A087WTH1 108 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 A0A0D9SFI3 127 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 A0A0U1RQG5 324 aaPredicted RBP11.32□□□□□ -0.6
LINC01138-204ENST00000613452 ZNF213O14771 459 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 CTAGE5O15320 804 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 PQBP1O60828 265 aaKnown RBP11.32□□□□□ -0.6
LINC01138-204ENST00000613452 SNHG28P0DPA3 235 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 ITGB8P26012 769 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 NMIQ13287 307 aaPredicted RBP11.32□□□□□ -0.6
LINC01138-204ENST00000613452 C9orf50Q5SZB4 431 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 ZNF697Q5TEC3 545 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 SYDE2Q5VT97 1194 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 MFSD5Q6N075 450 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 TAPT1Q6NXT6 567 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 PLEKHM2Q8IWE5 1019 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 ESR2Q92731 530 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 RILPL2Q969X0 211 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 VTI1AQ96AJ9 217 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 LNPKQ9C0E8 428 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 AP5M1Q9H0R1 490 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 VTA1Q9NP79 307 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 HOMER2Q9NSB8 354 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 TBX21Q9UL17 535 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 CCPG1Q9ULG6 757 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 ISY1Q9ULR0 285 aaKnown RBP11.32□□□□□ -0.6
LINC01138-204ENST00000613452 CCDC171Q6TFL3 1326 aa11.32□□□□□ -0.6
LINC01138-204ENST00000613452 COL11A1P12107 1806 aaPredicted RBP11.31□□□□□ -0.6
LINC01138-204ENST00000613452 FRMPD3Q5JV73 1810 aa11.31□□□□□ -0.6
LINC01138-204ENST00000613452 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.31□□□□□ -0.6
LINC01138-204ENST00000613452 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.31□□□□□ -0.6
LINC01138-204ENST00000613452 RBM47A0AV96 593 aaKnown RBP11.31□□□□□ -0.6
LINC01138-204ENST00000613452 B4DLN1 442 aa11.31□□□□□ -0.6
LINC01138-204ENST00000613452 TLR3O15455 904 aaKnown RBP11.31□□□□□ -0.6
LINC01138-204ENST00000613452 MRPL12P52815 198 aaKnown RBP11.31□□□□□ -0.6
LINC01138-204ENST00000613452 FPGSQ05932 587 aa11.31□□□□□ -0.6
LINC01138-204ENST00000613452 MUM1L1Q5H9M0 696 aa11.31□□□□□ -0.6
LINC01138-204ENST00000613452 GPATCH4Q5T3I0 446 aaKnown RBP11.31□□□□□ -0.6
LINC01138-204ENST00000613452 MPHOSPH6Q99547 160 aaKnown RBP11.31□□□□□ -0.6
LINC01138-204ENST00000613452 TOMM22Q9NS69 142 aa11.31□□□□□ -0.6
LINC01138-204ENST00000613452 CTNNA3Q9UI47 895 aa11.31□□□□□ -0.6
LINC01138-204ENST00000613452 LAMA2P24043 3122 aaKnown RBP11.31□□□□□ -0.6
LINC01138-204ENST00000613452 A0A0C4DFX4 3053 aa11.3□□□□□ -0.6
LINC01138-204ENST00000613452 MYADML2A6NDP7 307 aa11.3□□□□□ -0.6
LINC01138-204ENST00000613452 DYNC1LI2O43237 492 aaPredicted RBP11.3□□□□□ -0.6
LINC01138-204ENST00000613452 ADCY6O43306 1168 aa11.3□□□□□ -0.6
LINC01138-204ENST00000613452 CD4P01730 458 aa11.3□□□□□ -0.6
LINC01138-204ENST00000613452 IGHDP01880 384 aa11.3□□□□□ -0.6
LINC01138-204ENST00000613452 PDHBP11177 359 aa11.3□□□□□ -0.6
LINC01138-204ENST00000613452 SMPD1P17405 629 aa11.3□□□□□ -0.6
LINC01138-204ENST00000613452 ZNF543Q08ER8 600 aa11.3□□□□□ -0.6
LINC01138-204ENST00000613452 PPIGQ13427 754 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC01138-204ENST00000613452 BAATQ14032 418 aaPredicted RBP11.3□□□□□ -0.6
LINC01138-204ENST00000613452 FSCN1Q16658 493 aaKnown RBP11.3□□□□□ -0.6
LINC01138-204ENST00000613452 CCDC96Q2M329 555 aa11.3□□□□□ -0.6
LINC01138-204ENST00000613452 DUSP28Q4G0W2 176 aa11.3□□□□□ -0.6
LINC01138-204ENST00000613452 RRP12Q5JTH9 1297 aaKnown RBP11.3□□□□□ -0.6
LINC01138-204ENST00000613452 TTBK2Q6IQ55 1244 aa11.3□□□□□ -0.6
LINC01138-204ENST00000613452 NOL8Q76FK4 1167 aaKnown RBP11.3□□□□□ -0.6
LINC01138-204ENST00000613452 ZNF589Q86UQ0 364 aaPredicted RBP11.3□□□□□ -0.6
LINC01138-204ENST00000613452 TMEM199Q8N511 208 aa11.3□□□□□ -0.6
LINC01138-204ENST00000613452 DNERQ8NFT8 737 aa11.3□□□□□ -0.6
LINC01138-204ENST00000613452 LENG1Q96BZ8 264 aaPredicted RBP11.3□□□□□ -0.6
LINC01138-204ENST00000613452 DSCC1Q9BVC3 393 aa11.3□□□□□ -0.6
LINC01138-204ENST00000613452 WDR19Q8NEZ3 1342 aa11.3□□□□□ -0.6
LINC01138-204ENST00000613452 DLL1O00548 723 aa11.29□□□□□ -0.6
LINC01138-204ENST00000613452 NKRFO15226 690 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC01138-204ENST00000613452 KPNA6O60684 536 aa11.29□□□□□ -0.6
LINC01138-204ENST00000613452 SLC16A2P36021 539 aa11.29□□□□□ -0.6
LINC01138-204ENST00000613452 EPHB4P54760 987 aa11.29□□□□□ -0.6
LINC01138-204ENST00000613452 SNAP25P60880 206 aa11.29□□□□□ -0.6
LINC01138-204ENST00000613452 ITGA7Q13683 1181 aa11.29□□□□□ -0.6
LINC01138-204ENST00000613452 B4GALNT3Q6L9W6 998 aa11.29□□□□□ -0.6
LINC01138-204ENST00000613452 NSMFQ6X4W1 530 aa11.29□□□□□ -0.6
LINC01138-204ENST00000613452 KIAA1211Q6ZU35 1233 aa11.29□□□□□ -0.6
LINC01138-204ENST00000613452 IQCA1Q86XH1 822 aa11.29□□□□□ -0.6
LINC01138-204ENST00000613452 FAM126BQ8IXS8 530 aa11.29□□□□□ -0.6
LINC01138-204ENST00000613452 CLEC4DQ8WXI8 215 aa11.29□□□□□ -0.6
LINC01138-204ENST00000613452 RNPC3Q96LT9 517 aaKnown RBP11.29□□□□□ -0.6
LINC01138-204ENST00000613452 GUCD1Q96NT3 240 aa11.29□□□□□ -0.6
LINC01138-204ENST00000613452 GPCPD1Q9NPB8 672 aa11.29□□□□□ -0.6
LINC01138-204ENST00000613452 MYH4Q9Y623 1939 aa11.29□□□□□ -0.6
LINC01138-204ENST00000613452 PLXNA1Q9UIW2 1896 aa11.28□□□□□ -0.6
LINC01138-204ENST00000613452 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.28□□□□□ -0.6
LINC01138-204ENST00000613452 ALDH5A1P51649 535 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms