RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 NSMFQ6X4W1 530 aa21.06■□□□□ 0.96
SEMA3B-211ENST00000612509 NUP133Q8WUM0 1156 aa21.06■□□□□ 0.96
SEMA3B-211ENST00000612509 KCNB2Q92953 911 aa21.06■□□□□ 0.96
SEMA3B-211ENST00000612509 MYL10Q9BUA6 226 aa21.06■□□□□ 0.96
SEMA3B-211ENST00000612509 JMJD4Q9H9V9 463 aa21.06■□□□□ 0.96
SEMA3B-211ENST00000612509 CYP39A1Q9NYL5 469 aa21.06■□□□□ 0.96
SEMA3B-211ENST00000612509 MSCO60682 206 aa21.05■□□□□ 0.96
SEMA3B-211ENST00000612509 LIFRP42702 1097 aa21.05■□□□□ 0.96
SEMA3B-211ENST00000612509 CNTN2Q02246 1040 aa21.05■□□□□ 0.96
SEMA3B-211ENST00000612509 USH1GQ495M9 461 aa21.05■□□□□ 0.96
SEMA3B-211ENST00000612509 PRAMEF19Q5SWL8 479 aa21.05■□□□□ 0.96
SEMA3B-211ENST00000612509 MAMDC4Q6UXC1 1216 aa21.05■□□□□ 0.96
SEMA3B-211ENST00000612509 NFXL1Q6ZNB6 911 aa21.05■□□□□ 0.96
SEMA3B-211ENST00000612509 ANKLE1Q8NAG6 615 aa21.05■□□□□ 0.96
SEMA3B-211ENST00000612509 CLEC4DQ8WXI8 215 aa21.05■□□□□ 0.96
SEMA3B-211ENST00000612509 CCDC69A6NI79 296 aa21.04■□□□□ 0.96
SEMA3B-211ENST00000612509 SEPT4O43236 478 aa21.04■□□□□ 0.96
SEMA3B-211ENST00000612509 SLC35G1Q2M3R5 365 aa21.04■□□□□ 0.96
SEMA3B-211ENST00000612509 MTMR8Q96EF0 704 aa21.04■□□□□ 0.96
SEMA3B-211ENST00000612509 VAT1LQ9HCJ6 419 aa21.04■□□□□ 0.96
SEMA3B-211ENST00000612509 CNPY2Q9Y2B0 182 aa21.04■□□□□ 0.96
SEMA3B-211ENST00000612509 PDE4DIPQ5VU43 2346 aa21.04■□□□□ 0.96
SEMA3B-211ENST00000612509 ABCB11O95342 1321 aa21.04■□□□□ 0.96
SEMA3B-211ENST00000612509 EPB41L2O43491 1005 aaKnown RBP21.03■□□□□ 0.96
SEMA3B-211ENST00000612509 SLC30A10Q6XR72 485 aa21.03■□□□□ 0.96
SEMA3B-211ENST00000612509 ARMCX2Q7L311 632 aa21.03■□□□□ 0.96
SEMA3B-211ENST00000612509 DHX32Q7L7V1 743 aaKnown RBP21.03■□□□□ 0.96
SEMA3B-211ENST00000612509 TMTC2Q8N394 836 aa21.03■□□□□ 0.96
SEMA3B-211ENST00000612509 CTCFLQ8NI51 663 aaPredicted RBP21.03■□□□□ 0.96
SEMA3B-211ENST00000612509 DIS3LQ8TF46 1054 aaKnown RBP21.03■□□□□ 0.96
SEMA3B-211ENST00000612509 TCEANC2Q96MN5 208 aa21.03■□□□□ 0.96
SEMA3B-211ENST00000612509 MAP3K14Q99558 947 aa21.03■□□□□ 0.96
SEMA3B-211ENST00000612509 SNX14Q9Y5W7 946 aa21.03■□□□□ 0.96
SEMA3B-211ENST00000612509 ASTN1O14525 1302 aa21.03■□□□□ 0.96
SEMA3B-211ENST00000612509 PTPDC1A2A3K4 754 aa21.02■□□□□ 0.96
SEMA3B-211ENST00000612509 SOWAHBA6NEL2 793 aa21.02■□□□□ 0.96
SEMA3B-211ENST00000612509 SNAI1O95863 264 aaPredicted RBP21.02■□□□□ 0.96
SEMA3B-211ENST00000612509 ZNF865P0CJ78 1059 aaPredicted RBP21.02■□□□□ 0.96
SEMA3B-211ENST00000612509 MNX1P50219 401 aaPredicted RBP21.02■□□□□ 0.96
SEMA3B-211ENST00000612509 EXOSC10Q01780 885 aaKnown RBP21.02■□□□□ 0.96
SEMA3B-211ENST00000612509 BAATQ14032 418 aaPredicted RBP21.02■□□□□ 0.96
SEMA3B-211ENST00000612509 SGMS1Q86VZ5 419 aa21.02■□□□□ 0.96
SEMA3B-211ENST00000612509 FBXO11Q86XK2 927 aa21.02■□□□□ 0.96
SEMA3B-211ENST00000612509 JAKMIP1Q96N16 626 aaKnown RBP21.02■□□□□ 0.96
SEMA3B-211ENST00000612509 RIOX1Q9H6W3 641 aa21.02■□□□□ 0.96
SEMA3B-211ENST00000612509 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.02■□□□□ 0.96
SEMA3B-211ENST00000612509 ZHX1Q9UKY1 873 aaPredicted RBP21.02■□□□□ 0.96
SEMA3B-211ENST00000612509 ZBTB5O15062 677 aa21.01■□□□□ 0.95
SEMA3B-211ENST00000612509 CYTH3O43739 400 aa21.01■□□□□ 0.95
SEMA3B-211ENST00000612509 HMGB1P09429 215 aaKnown RBP21.01■□□□□ 0.95
SEMA3B-211ENST00000612509 RXRAP19793 462 aa21.01■□□□□ 0.95
SEMA3B-211ENST00000612509 KIF5BP33176 963 aa21.01■□□□□ 0.95
SEMA3B-211ENST00000612509 ANO1Q5XXA6 986 aa21.01■□□□□ 0.95
SEMA3B-211ENST00000612509 RNF207Q6ZRF8 634 aa21.01■□□□□ 0.95
SEMA3B-211ENST00000612509 HOMER1Q86YM7 354 aa21.01■□□□□ 0.95
SEMA3B-211ENST00000612509 CCDC144CPQ8IYA2 1237 aa21.01■□□□□ 0.95
SEMA3B-211ENST00000612509 SLC12A7Q9Y666 1083 aa21.01■□□□□ 0.95
SEMA3B-211ENST00000612509 BAZ2BQ9UIF8 2168 aaKnown RBP21.01■□□□□ 0.95
SEMA3B-211ENST00000612509 CALM1P0DP23 149 aa21■□□□□ 0.95
SEMA3B-211ENST00000612509 CALM2P0DP24 149 aa21■□□□□ 0.95
SEMA3B-211ENST00000612509 CALM3P0DP25 149 aa21■□□□□ 0.95
SEMA3B-211ENST00000612509 AKR1A1P14550 325 aa21■□□□□ 0.95
SEMA3B-211ENST00000612509 RPS6P62753 249 aaKnown RBP21■□□□□ 0.95
SEMA3B-211ENST00000612509 MICU3Q86XE3 530 aa21■□□□□ 0.95
SEMA3B-211ENST00000612509 RAB11FIP4Q86YS3 637 aa21■□□□□ 0.95
SEMA3B-211ENST00000612509 PAWRQ96IZ0 340 aaKnown RBP21■□□□□ 0.95
SEMA3B-211ENST00000612509 PURBQ96QR8 312 aaKnown RBP21■□□□□ 0.95
SEMA3B-211ENST00000612509 PIGSQ96S52 555 aa21■□□□□ 0.95
SEMA3B-211ENST00000612509 AMNQ9BXJ7 453 aa21■□□□□ 0.95
SEMA3B-211ENST00000612509 ALPK3Q96L96 1907 aa21■□□□□ 0.95
SEMA3B-211ENST00000612509 ASB14A6NK59 587 aa20.99■□□□□ 0.95
SEMA3B-211ENST00000612509 PPP1R11O60927 126 aaPredicted RBP20.99■□□□□ 0.95
SEMA3B-211ENST00000612509 CALML3P27482 149 aa20.99■□□□□ 0.95
SEMA3B-211ENST00000612509 NECAB2Q7Z6G3 386 aa20.99■□□□□ 0.95
SEMA3B-211ENST00000612509 SPZ1Q9BXG8 430 aa20.99■□□□□ 0.95
SEMA3B-211ENST00000612509 ABHD16BQ9H3Z7 469 aa20.99■□□□□ 0.95
SEMA3B-211ENST00000612509 MRPL11Q9Y3B7 192 aaKnown RBP20.99■□□□□ 0.95
SEMA3B-211ENST00000612509 PLEKHA8P1O95397 391 aa20.98■□□□□ 0.95
SEMA3B-211ENST00000612509 CPA1P15085 419 aa20.98■□□□□ 0.95
SEMA3B-211ENST00000612509 ALDH5A1P51649 535 aaPredicted RBP20.98■□□□□ 0.95
SEMA3B-211ENST00000612509 ACVR2BQ13705 512 aa20.98■□□□□ 0.95
SEMA3B-211ENST00000612509 APOA5Q6Q788 366 aa20.98■□□□□ 0.95
SEMA3B-211ENST00000612509 BLOC1S2Q6QNY1 142 aa20.98■□□□□ 0.95
SEMA3B-211ENST00000612509 RGS22Q8NE09 1264 aa20.98■□□□□ 0.95
SEMA3B-211ENST00000612509 LENG1Q96BZ8 264 aaPredicted RBP20.98■□□□□ 0.95
SEMA3B-211ENST00000612509 HTATIP2Q9BUP3 242 aa20.98■□□□□ 0.95
SEMA3B-211ENST00000612509 USP26Q9BXU7 913 aa20.98■□□□□ 0.95
SEMA3B-211ENST00000612509 KATNBL1Q9H079 304 aa20.98■□□□□ 0.95
SEMA3B-211ENST00000612509 C11orf49Q9H6J7 331 aa20.98■□□□□ 0.95
SEMA3B-211ENST00000612509 ADD3Q9UEY8 706 aaKnown RBP20.98■□□□□ 0.95
SEMA3B-211ENST00000612509 DDX49Q9Y6V7 483 aaKnown RBP20.98■□□□□ 0.95
SEMA3B-211ENST00000612509 RARBP10826 455 aa20.97■□□□□ 0.95
SEMA3B-211ENST00000612509 GNAQP50148 359 aa20.97■□□□□ 0.95
SEMA3B-211ENST00000612509 LZTS2Q9BRK4 669 aa20.97■□□□□ 0.95
SEMA3B-211ENST00000612509 MAF1Q9H063 256 aa20.97■□□□□ 0.95
SEMA3B-211ENST00000612509 LOC102724159A0A0B4J2E5 919 aa20.96■□□□□ 0.95
SEMA3B-211ENST00000612509 DNM1LO00429 736 aa20.96■□□□□ 0.95
SEMA3B-211ENST00000612509 PSMA5P28066 241 aa20.96■□□□□ 0.95
SEMA3B-211ENST00000612509 PWP2Q15269 919 aaKnown RBP20.96■□□□□ 0.95
SEMA3B-211ENST00000612509 SYNE3Q6ZMZ3 975 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms