RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 FTOQ9C0B1 505 aaKnown RBP eCLIP15.23■□□□□ 0.03
NEAT1-204ENST00000612303 SLC38A10Q9HBR0 1119 aa15.23■□□□□ 0.03
NEAT1-204ENST00000612303 GBA2Q9HCG7 927 aaPredicted RBP15.23■□□□□ 0.03
NEAT1-204ENST00000612303 HOXC10Q9NYD6 342 aa15.23■□□□□ 0.03
NEAT1-204ENST00000612303 MRPL11Q9Y3B7 192 aaKnown RBP15.23■□□□□ 0.03
NEAT1-204ENST00000612303 TRPM7Q96QT4 1865 aa15.23■□□□□ 0.03
NEAT1-204ENST00000612303 SMCHD1A6NHR9 2005 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 LOC285556D6RIA3 1793 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 A0A1W2PQ27 194 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 A0A1W2PQ64 194 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 A0A1W2PQD8 194 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 FAM205CA6NFA0 338 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 PIK3CDO00329 1044 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 IRF6O14896 467 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 ITGBL1O95965 494 aaPredicted RBP15.22■□□□□ 0.03
NEAT1-204ENST00000612303 FOSP01100 380 aaPredicted RBP15.22■□□□□ 0.03
NEAT1-204ENST00000612303 HOXA7P31268 230 aaPredicted RBP15.22■□□□□ 0.03
NEAT1-204ENST00000612303 DSG3P32926 999 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 ME1P48163 572 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 SNAP25P60880 206 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 AP3B2Q13367 1082 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 ORC2Q13416 577 aaPredicted RBP15.22■□□□□ 0.03
NEAT1-204ENST00000612303 TTC38Q5R3I4 469 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 SAMD3Q8N6K7 520 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 GPT2Q8TD30 523 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 RASGRP4Q8TDF6 673 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 PCDHA7Q9UN72 937 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 PCDHB6Q9Y5E3 794 aa15.22■□□□□ 0.03
NEAT1-204ENST00000612303 VWA5AO00534 786 aa15.21■□□□□ 0.03
NEAT1-204ENST00000612303 OAZ1P54368 228 aa15.21■□□□□ 0.03
NEAT1-204ENST00000612303 DGKZQ13574 1117 aa15.21■□□□□ 0.03
NEAT1-204ENST00000612303 USH1GQ495M9 461 aa15.21■□□□□ 0.03
NEAT1-204ENST00000612303 NOM1Q5C9Z4 860 aaKnown RBP15.21■□□□□ 0.03
NEAT1-204ENST00000612303 JAKMIP3Q5VZ66 844 aa15.21■□□□□ 0.03
NEAT1-204ENST00000612303 CCDC174Q6PII3 467 aa15.21■□□□□ 0.03
NEAT1-204ENST00000612303 FASTKD5Q7L8L6 764 aaKnown RBP15.21■□□□□ 0.03
NEAT1-204ENST00000612303 CNKSR2Q8WXI2 1034 aa15.21■□□□□ 0.03
NEAT1-204ENST00000612303 OPTNQ96CV9 577 aa15.21■□□□□ 0.03
NEAT1-204ENST00000612303 OTUD5Q96G74 571 aa15.21■□□□□ 0.03
NEAT1-204ENST00000612303 MAF1Q9H063 256 aa15.21■□□□□ 0.03
NEAT1-204ENST00000612303 BIN2Q9UBW5 565 aaPredicted RBP15.21■□□□□ 0.03
NEAT1-204ENST00000612303 CTDP1Q9Y5B0 961 aaPredicted RBP15.21■□□□□ 0.03
NEAT1-204ENST00000612303 ZNF536O15090 1300 aa15.2■□□□□ 0.02
NEAT1-204ENST00000612303 MEIS2O14770 477 aa15.2■□□□□ 0.02
NEAT1-204ENST00000612303 ATP2A1O14983 1001 aa15.2■□□□□ 0.02
NEAT1-204ENST00000612303 CUTAO60888 179 aa15.2■□□□□ 0.02
NEAT1-204ENST00000612303 ATP2B1P20020 1258 aa15.2■□□□□ 0.02
NEAT1-204ENST00000612303 INF2Q27J81 1249 aa15.2■□□□□ 0.02
NEAT1-204ENST00000612303 NEK8Q86SG6 692 aa15.2■□□□□ 0.02
NEAT1-204ENST00000612303 ZNF526Q8TF50 670 aaPredicted RBP15.2■□□□□ 0.02
NEAT1-204ENST00000612303 SYAP1Q96A49 352 aaPredicted RBP15.2■□□□□ 0.02
NEAT1-204ENST00000612303 NAP1L4Q99733 375 aaKnown RBP15.2■□□□□ 0.02
NEAT1-204ENST00000612303 ZNF408Q9H9D4 720 aa15.2■□□□□ 0.02
NEAT1-204ENST00000612303 MAP3K20Q9NYL2 800 aaKnown RBP15.2■□□□□ 0.02
NEAT1-204ENST00000612303 CCPG1Q9ULG6 757 aa15.2■□□□□ 0.02
NEAT1-204ENST00000612303 OPLAHO14841 1288 aa15.19■□□□□ 0.02
NEAT1-204ENST00000612303 CELF2O95319 508 aaKnown RBP15.19■□□□□ 0.02
NEAT1-204ENST00000612303 PTPREP23469 700 aa15.19■□□□□ 0.02
NEAT1-204ENST00000612303 GHRHRQ02643 423 aa15.19■□□□□ 0.02
NEAT1-204ENST00000612303 FMR1Q06787 632 aaKnown RBP eCLIP15.19■□□□□ 0.02
NEAT1-204ENST00000612303 PABPC4Q13310 644 aaKnown RBP eCLIP15.19■□□□□ 0.02
NEAT1-204ENST00000612303 SNAPC2Q13487 334 aa15.19■□□□□ 0.02
NEAT1-204ENST00000612303 ZNF174Q15697 407 aa15.19■□□□□ 0.02
NEAT1-204ENST00000612303 AXDND1Q5T1B0 1012 aaPredicted RBP15.19■□□□□ 0.02
NEAT1-204ENST00000612303 MCF2L2Q86YR7 1114 aa15.19■□□□□ 0.02
NEAT1-204ENST00000612303 KRI1Q8N9T8 703 aaKnown RBP15.19■□□□□ 0.02
NEAT1-204ENST00000612303 ZNF579Q8NAF0 562 aaKnown RBP15.19■□□□□ 0.02
NEAT1-204ENST00000612303 REPS2Q8NFH8 660 aa15.19■□□□□ 0.02
NEAT1-204ENST00000612303 TBCKQ8TEA7 893 aa15.19■□□□□ 0.02
NEAT1-204ENST00000612303 FERMT2Q96AC1 680 aa15.19■□□□□ 0.02
NEAT1-204ENST00000612303 TMEM260Q9NX78 707 aa15.19■□□□□ 0.02
NEAT1-204ENST00000612303 SRPRBQ9Y5M8 271 aaKnown RBP15.19■□□□□ 0.02
NEAT1-204ENST00000612303 MYH7BA7E2Y1 1941 aa15.18■□□□□ 0.02
NEAT1-204ENST00000612303 GCOM1H8Y6P7 765 aaPredicted RBP15.18■□□□□ 0.02
NEAT1-204ENST00000612303 LAD1O00515 517 aa15.18■□□□□ 0.02
NEAT1-204ENST00000612303 POLR2MP0CAP2 368 aa15.18■□□□□ 0.02
NEAT1-204ENST00000612303 CMA1P23946 247 aa15.18■□□□□ 0.02
NEAT1-204ENST00000612303 USP11P51784 963 aa15.18■□□□□ 0.02
NEAT1-204ENST00000612303 ATP2C1P98194 919 aaPredicted RBP15.18■□□□□ 0.02
NEAT1-204ENST00000612303 UBE2SQ16763 222 aa15.18■□□□□ 0.02
NEAT1-204ENST00000612303 TKFCQ3LXA3 575 aa15.18■□□□□ 0.02
NEAT1-204ENST00000612303 ARL6IP4Q66PJ3 421 aaKnown RBP15.18■□□□□ 0.02
NEAT1-204ENST00000612303 USP17L6PQ6QN14 398 aa15.18■□□□□ 0.02
NEAT1-204ENST00000612303 SAMD1Q6SPF0 538 aaPredicted RBP15.18■□□□□ 0.02
NEAT1-204ENST00000612303 MB21D1Q8N884 522 aa15.18■□□□□ 0.02
NEAT1-204ENST00000612303 ATG4CQ96DT6 458 aa15.18■□□□□ 0.02
NEAT1-204ENST00000612303 AGBL1Q96MI9 1066 aa15.18■□□□□ 0.02
NEAT1-204ENST00000612303 AGTPBP1Q9UPW5 1226 aa15.18■□□□□ 0.02
NEAT1-204ENST00000612303 COL11A1P12107 1806 aaPredicted RBP15.17■□□□□ 0.02
NEAT1-204ENST00000612303 FAM237AA0A1B0GTK4 181 aa15.17■□□□□ 0.02
NEAT1-204ENST00000612303 SPDYE16A6NNV3 312 aaPredicted RBP15.17■□□□□ 0.02
NEAT1-204ENST00000612303 GCFC2P16383 781 aaKnown RBP15.17■□□□□ 0.02
NEAT1-204ENST00000612303 MARCKSP29966 332 aaPredicted RBP15.17■□□□□ 0.02
NEAT1-204ENST00000612303 PTGDRQ13258 359 aa15.17■□□□□ 0.02
NEAT1-204ENST00000612303 MOGSQ13724 837 aa15.17■□□□□ 0.02
NEAT1-204ENST00000612303 CST9Q5W186 159 aa15.17■□□□□ 0.02
NEAT1-204ENST00000612303 PPP4R3AQ6IN85 833 aa15.17■□□□□ 0.02
NEAT1-204ENST00000612303 LBX2Q6XYB7 198 aa15.17■□□□□ 0.02
NEAT1-204ENST00000612303 GADL1Q6ZQY3 521 aa15.17■□□□□ 0.02
NEAT1-204ENST00000612303 CCAR1Q8IX12 1150 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms