RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 KCNB2Q92953 911 aa30.3■■■□□ 2.44
VEGFA-226ENST00000611736 CYP39A1Q9NYL5 469 aa30.3■■■□□ 2.44
VEGFA-226ENST00000611736 SNX14Q9Y5W7 946 aa30.3■■■□□ 2.44
VEGFA-226ENST00000611736 DDAH1O94760 285 aa30.29■■■□□ 2.44
VEGFA-226ENST00000611736 LIFRP42702 1097 aa30.29■■■□□ 2.44
VEGFA-226ENST00000611736 LHX8Q68G74 356 aa30.29■■■□□ 2.44
VEGFA-226ENST00000611736 DHX32Q7L7V1 743 aaKnown RBP30.29■■■□□ 2.44
VEGFA-226ENST00000611736 ZNF467Q7Z7K2 595 aaPredicted RBP30.29■■■□□ 2.44
VEGFA-226ENST00000611736 FAM133AQ8N9E0 248 aa30.29■■■□□ 2.44
VEGFA-226ENST00000611736 CLEC4DQ8WXI8 215 aa30.29■■■□□ 2.44
VEGFA-226ENST00000611736 DDX20Q9UHI6 824 aaKnown RBP30.29■■■□□ 2.44
VEGFA-226ENST00000611736 MSL3Q8N5Y2 521 aaKnown RBP30.28■■■□□ 2.44
VEGFA-226ENST00000611736 JAKMIP1Q96N16 626 aaKnown RBP30.28■■■□□ 2.44
VEGFA-226ENST00000611736 OGDHLQ9ULD0 1010 aa30.28■■■□□ 2.44
VEGFA-226ENST00000611736 FRMPD3Q5JV73 1810 aa30.27■■■□□ 2.44
VEGFA-226ENST00000611736 CAPN2P17655 700 aa30.27■■■□□ 2.44
VEGFA-226ENST00000611736 EXOSC10Q01780 885 aaKnown RBP30.27■■■□□ 2.44
VEGFA-226ENST00000611736 BAATQ14032 418 aaPredicted RBP30.27■■■□□ 2.44
VEGFA-226ENST00000611736 SLC35G1Q2M3R5 365 aa30.27■■■□□ 2.44
VEGFA-226ENST00000611736 RAB11FIP4Q86YS3 637 aa30.27■■■□□ 2.44
VEGFA-226ENST00000611736 CTCFLQ8NI51 663 aaPredicted RBP30.27■■■□□ 2.44
VEGFA-226ENST00000611736 CNPY2Q9Y2B0 182 aa30.27■■■□□ 2.44
VEGFA-226ENST00000611736 SYNGAP1Q96PV0 1343 aa30.26■■■□□ 2.44
VEGFA-226ENST00000611736 PTPDC1A2A3K4 754 aa30.26■■■□□ 2.43
VEGFA-226ENST00000611736 SOWAHBA6NEL2 793 aa30.26■■■□□ 2.43
VEGFA-226ENST00000611736 CPA1P15085 419 aa30.26■■■□□ 2.43
VEGFA-226ENST00000611736 RXRAP19793 462 aa30.26■■■□□ 2.43
VEGFA-226ENST00000611736 ANO1Q5XXA6 986 aa30.26■■■□□ 2.43
VEGFA-226ENST00000611736 MAMDC4Q6UXC1 1216 aa30.26■■■□□ 2.43
VEGFA-226ENST00000611736 UBE2Q1Q7Z7E8 422 aa30.26■■■□□ 2.43
VEGFA-226ENST00000611736 FBXO11Q86XK2 927 aa30.26■■■□□ 2.43
VEGFA-226ENST00000611736 PURBQ96QR8 312 aaKnown RBP30.26■■■□□ 2.43
VEGFA-226ENST00000611736 NRBP1Q9UHY1 535 aa30.26■■■□□ 2.43
VEGFA-226ENST00000611736 SLC12A7Q9Y666 1083 aa30.26■■■□□ 2.43
VEGFA-226ENST00000611736 LCTP09848 1927 aa30.26■■■□□ 2.43
VEGFA-226ENST00000611736 SEPT4O43236 478 aa30.25■■■□□ 2.43
VEGFA-226ENST00000611736 MSCO60682 206 aa30.25■■■□□ 2.43
VEGFA-226ENST00000611736 SNAI1O95863 264 aaPredicted RBP30.25■■■□□ 2.43
VEGFA-226ENST00000611736 HMGB1P09429 215 aaKnown RBP30.25■■■□□ 2.43
VEGFA-226ENST00000611736 SLC30A10Q6XR72 485 aa30.25■■■□□ 2.43
VEGFA-226ENST00000611736 HOMER1Q86YM7 354 aa30.25■■■□□ 2.43
VEGFA-226ENST00000611736 CCDC144CPQ8IYA2 1237 aa30.25■■■□□ 2.43
VEGFA-226ENST00000611736 DIS3LQ8TF46 1054 aaKnown RBP30.25■■■□□ 2.43
VEGFA-226ENST00000611736 MTMR8Q96EF0 704 aa30.25■■■□□ 2.43
VEGFA-226ENST00000611736 MAP3K14Q99558 947 aa30.25■■■□□ 2.43
VEGFA-226ENST00000611736 USP26Q9BXU7 913 aa30.25■■■□□ 2.43
VEGFA-226ENST00000611736 ABCB11O95342 1321 aa30.24■■■□□ 2.43
VEGFA-226ENST00000611736 CYTH3O43739 400 aa30.24■■■□□ 2.43
VEGFA-226ENST00000611736 KIF5BP33176 963 aa30.24■■■□□ 2.43
VEGFA-226ENST00000611736 PRPF38BQ5VTL8 546 aaKnown RBP30.24■■■□□ 2.43
VEGFA-226ENST00000611736 RNF207Q6ZRF8 634 aa30.24■■■□□ 2.43
VEGFA-226ENST00000611736 ARMCX2Q7L311 632 aa30.24■■■□□ 2.43
VEGFA-226ENST00000611736 RIOX1Q9H6W3 641 aa30.24■■■□□ 2.43
VEGFA-226ENST00000611736 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.24■■■□□ 2.43
VEGFA-226ENST00000611736 ZHX1Q9UKY1 873 aaPredicted RBP30.24■■■□□ 2.43
VEGFA-226ENST00000611736 ZBTB5O15062 677 aa30.23■■■□□ 2.43
VEGFA-226ENST00000611736 EPB41L2O43491 1005 aaKnown RBP30.23■■■□□ 2.43
VEGFA-226ENST00000611736 ZNF865P0CJ78 1059 aaPredicted RBP30.23■■■□□ 2.43
VEGFA-226ENST00000611736 CALML3P27482 149 aa30.23■■■□□ 2.43
VEGFA-226ENST00000611736 SGMS1Q86VZ5 419 aa30.23■■■□□ 2.43
VEGFA-226ENST00000611736 ANKLE1Q8NAG6 615 aa30.23■■■□□ 2.43
VEGFA-226ENST00000611736 PIBF1Q8WXW3 757 aa30.23■■■□□ 2.43
VEGFA-226ENST00000611736 PAWRQ96IZ0 340 aaKnown RBP30.23■■■□□ 2.43
VEGFA-226ENST00000611736 PIGSQ96S52 555 aa30.23■■■□□ 2.43
VEGFA-226ENST00000611736 ASTN1O14525 1302 aa30.22■■■□□ 2.43
VEGFA-226ENST00000611736 CALM1P0DP23 149 aa30.22■■■□□ 2.43
VEGFA-226ENST00000611736 CALM2P0DP24 149 aa30.22■■■□□ 2.43
VEGFA-226ENST00000611736 CALM3P0DP25 149 aa30.22■■■□□ 2.43
VEGFA-226ENST00000611736 RPS6P62753 249 aaKnown RBP30.22■■■□□ 2.43
VEGFA-226ENST00000611736 BLOC1S2Q6QNY1 142 aa30.22■■■□□ 2.43
VEGFA-226ENST00000611736 MICU3Q86XE3 530 aa30.22■■■□□ 2.43
VEGFA-226ENST00000611736 AMNQ9BXJ7 453 aa30.22■■■□□ 2.43
VEGFA-226ENST00000611736 DDX49Q9Y6V7 483 aaKnown RBP30.22■■■□□ 2.43
VEGFA-226ENST00000611736 PPP1R11O60927 126 aaPredicted RBP30.21■■■□□ 2.43
VEGFA-226ENST00000611736 MNX1P50219 401 aaPredicted RBP30.21■■■□□ 2.43
VEGFA-226ENST00000611736 FGD1P98174 961 aa30.21■■■□□ 2.43
VEGFA-226ENST00000611736 SYNE3Q6ZMZ3 975 aa30.21■■■□□ 2.43
VEGFA-226ENST00000611736 MRPL11Q9Y3B7 192 aaKnown RBP30.21■■■□□ 2.43
VEGFA-226ENST00000611736 ASB14A6NK59 587 aa30.2■■■□□ 2.43
VEGFA-226ENST00000611736 PLEKHA8P1O95397 391 aa30.2■■■□□ 2.43
VEGFA-226ENST00000611736 CEP290O15078 2479 aa30.2■■■□□ 2.42
VEGFA-226ENST00000611736 CASTP20810 708 aaKnown RBP30.19■■■□□ 2.42
VEGFA-226ENST00000611736 GNAQP50148 359 aa30.19■■■□□ 2.42
VEGFA-226ENST00000611736 ACVR2BQ13705 512 aa30.19■■■□□ 2.42
VEGFA-226ENST00000611736 APOA5Q6Q788 366 aa30.19■■■□□ 2.42
VEGFA-226ENST00000611736 NECAB2Q7Z6G3 386 aa30.19■■■□□ 2.42
VEGFA-226ENST00000611736 TBC1D5Q92609 795 aa30.19■■■□□ 2.42
VEGFA-226ENST00000611736 ABHD16BQ9H3Z7 469 aa30.19■■■□□ 2.42
VEGFA-226ENST00000611736 ADD3Q9UEY8 706 aaKnown RBP30.19■■■□□ 2.42
VEGFA-226ENST00000611736 BRPF3Q9ULD4 1205 aa30.19■■■□□ 2.42
VEGFA-226ENST00000611736 PCDHA1Q9Y5I3 950 aa30.19■■■□□ 2.42
VEGFA-226ENST00000611736 AKR1A1P14550 325 aa30.18■■■□□ 2.42
VEGFA-226ENST00000611736 PSMA5P28066 241 aa30.18■■■□□ 2.42
VEGFA-226ENST00000611736 Q6ZUG5 572 aa30.18■■■□□ 2.42
VEGFA-226ENST00000611736 CMTR1Q8N1G2 835 aaKnown RBP30.18■■■□□ 2.42
VEGFA-226ENST00000611736 FANCBQ8NB91 859 aa30.18■■■□□ 2.42
VEGFA-226ENST00000611736 RGS22Q8NE09 1264 aa30.18■■■□□ 2.42
VEGFA-226ENST00000611736 LENG1Q96BZ8 264 aaPredicted RBP30.18■■■□□ 2.42
VEGFA-226ENST00000611736 LZTS2Q9BRK4 669 aa30.18■■■□□ 2.42
VEGFA-226ENST00000611736 SPZ1Q9BXG8 430 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms