RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 PFKFB3Q16875 520 aaPredicted RBP15.7■□□□□ 0.1
COPS7B-223ENST00000611614 KIF4BQ2VIQ3 1234 aa15.7■□□□□ 0.1
COPS7B-223ENST00000611614 E4F1Q66K89 784 aaPredicted RBP15.7■□□□□ 0.1
COPS7B-223ENST00000611614 MYH8P13535 1937 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 CNTNAP1P78357 1384 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 SLURP2P0DP57 97 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 NLRP5P59047 1200 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 ASPRV1Q53RT3 343 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 DHX58Q96C10 678 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 EPSTI1Q96J88 318 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 WNT7AO00755 349 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 RAD21O60216 631 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 GDF11O95390 407 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 GOLGA8HP0CJ92 632 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 TRAPPC10P48553 1259 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 ICA1Q05084 483 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 FMR1Q06787 632 aaKnown RBP eCLIP15.69■□□□□ 0.1
COPS7B-223ENST00000611614 NOM1Q5C9Z4 860 aaKnown RBP15.69■□□□□ 0.1
COPS7B-223ENST00000611614 FBXO38Q6PIJ6 1188 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 USP17L2Q6R6M4 530 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 CLEC10AQ8IUN9 316 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 SYMPKQ92797 1274 aaKnown RBP15.69■□□□□ 0.1
COPS7B-223ENST00000611614 PPP1R13BQ96KQ4 1090 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 RNF181Q9P0P0 153 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 NYAP2Q9P242 653 aa15.69■□□□□ 0.1
COPS7B-223ENST00000611614 A0A087X0B3 334 aa15.68■□□□□ 0.1
COPS7B-223ENST00000611614 ATP2C1P98194 919 aaPredicted RBP15.68■□□□□ 0.1
COPS7B-223ENST00000611614 RASA3Q14644 834 aa15.68■□□□□ 0.1
COPS7B-223ENST00000611614 TERF2Q15554 542 aa15.68■□□□□ 0.1
COPS7B-223ENST00000611614 ELF2Q15723 593 aa15.68■□□□□ 0.1
COPS7B-223ENST00000611614 CT47A1Q5JQC4 288 aaPredicted RBP15.68■□□□□ 0.1
COPS7B-223ENST00000611614 SH3RF1Q7Z6J0 888 aa15.68■□□□□ 0.1
COPS7B-223ENST00000611614 NFE2L3Q9Y4A8 694 aa15.68■□□□□ 0.1
COPS7B-223ENST00000611614 USP17L5A8MUK1 530 aa15.68■□□□□ 0.1
COPS7B-223ENST00000611614 TBC1D12O60347 775 aa15.68■□□□□ 0.1
COPS7B-223ENST00000611614 GH2P01242 217 aa15.68■□□□□ 0.1
COPS7B-223ENST00000611614 PDHBP11177 359 aa15.68■□□□□ 0.1
COPS7B-223ENST00000611614 ZNF18P17022 549 aa15.68■□□□□ 0.1
COPS7B-223ENST00000611614 SMARCA1P28370 1054 aa15.68■□□□□ 0.1
COPS7B-223ENST00000611614 ERCC5P28715 1186 aaPredicted RBP15.68■□□□□ 0.1
COPS7B-223ENST00000611614 BMS1Q14692 1282 aaKnown RBP15.68■□□□□ 0.1
COPS7B-223ENST00000611614 SEPT2Q15019 361 aa15.68■□□□□ 0.1
COPS7B-223ENST00000611614 PAGE5Q96GU1 130 aa15.68■□□□□ 0.1
COPS7B-223ENST00000611614 SEC63Q9UGP8 760 aaKnown RBP15.68■□□□□ 0.1
COPS7B-223ENST00000611614 TMEM232C9JQI7 657 aa15.67■□□□□ 0.1
COPS7B-223ENST00000611614 EEF2P13639 858 aaKnown RBP15.67■□□□□ 0.1
COPS7B-223ENST00000611614 PTGDRQ13258 359 aa15.67■□□□□ 0.1
COPS7B-223ENST00000611614 GPATCH4Q5T3I0 446 aaKnown RBP15.67■□□□□ 0.1
COPS7B-223ENST00000611614 RRP36Q96EU6 259 aaKnown RBP15.67■□□□□ 0.1
COPS7B-223ENST00000611614 SPZ1Q9BXG8 430 aa15.67■□□□□ 0.1
COPS7B-223ENST00000611614 GPRC5DQ9NZD1 345 aa15.67■□□□□ 0.1
COPS7B-223ENST00000611614 CCDC66A2RUB6 948 aa15.67■□□□□ 0.1
COPS7B-223ENST00000611614 EGFRP00533 1210 aa15.67■□□□□ 0.1
COPS7B-223ENST00000611614 H2AFXP16104 143 aaPredicted RBP15.67■□□□□ 0.1
COPS7B-223ENST00000611614 CDK11BP21127 795 aaKnown RBP15.67■□□□□ 0.1
COPS7B-223ENST00000611614 CALML3P27482 149 aa15.67■□□□□ 0.1
COPS7B-223ENST00000611614 CCDC96Q2M329 555 aa15.67■□□□□ 0.1
COPS7B-223ENST00000611614 PIK3AP1Q6ZUJ8 805 aa15.67■□□□□ 0.1
COPS7B-223ENST00000611614 MIGA2Q7L4E1 593 aa15.67■□□□□ 0.1
COPS7B-223ENST00000611614 SRRTQ9BXP5 876 aaKnown RBP15.67■□□□□ 0.1
COPS7B-223ENST00000611614 TMX1Q9H3N1 280 aa15.67■□□□□ 0.1
COPS7B-223ENST00000611614 SH3GLB2Q9NR46 395 aa15.67■□□□□ 0.1
COPS7B-223ENST00000611614 INTS13Q9NVM9 706 aa15.67■□□□□ 0.1
COPS7B-223ENST00000611614 HACL1Q9UJ83 578 aa15.67■□□□□ 0.1
COPS7B-223ENST00000611614 PHLPP2Q6ZVD8 1323 aa15.66■□□□□ 0.1
COPS7B-223ENST00000611614 AFMP43652 599 aa15.66■□□□□ 0.1
COPS7B-223ENST00000611614 MKL1Q969V6 931 aa15.66■□□□□ 0.1
COPS7B-223ENST00000611614 VWA3AA6NCI4 1184 aa15.66■□□□□ 0.1
COPS7B-223ENST00000611614 FCHSD1Q86WN1 690 aa15.66■□□□□ 0.1
COPS7B-223ENST00000611614 CCDC148Q8NFR7 591 aa15.66■□□□□ 0.1
COPS7B-223ENST00000611614 MED15Q96RN5 788 aa15.66■□□□□ 0.1
COPS7B-223ENST00000611614 ARHGEF10LQ9HCE6 1279 aa15.66■□□□□ 0.1
COPS7B-223ENST00000611614 FRMPD2Q68DX3 1309 aaPredicted RBP15.65■□□□□ 0.1
COPS7B-223ENST00000611614 VEGFAP15692 232 aaPredicted RBP15.65■□□□□ 0.1
COPS7B-223ENST00000611614 YBX3P16989 372 aaKnown RBP eCLIP15.65■□□□□ 0.1
COPS7B-223ENST00000611614 DPYDQ12882 1025 aa15.65■□□□□ 0.1
COPS7B-223ENST00000611614 APOBEC3FQ8IUX4 373 aaKnown RBP15.65■□□□□ 0.1
COPS7B-223ENST00000611614 TRMT44Q8IYL2 757 aaKnown RBP15.65■□□□□ 0.1
COPS7B-223ENST00000611614 CCDC12Q8WUD4 166 aaPredicted RBP15.65■□□□□ 0.1
COPS7B-223ENST00000611614 HOOK2Q96ED9 719 aa15.65■□□□□ 0.1
COPS7B-223ENST00000611614 VAT1LQ9HCJ6 419 aa15.65■□□□□ 0.1
COPS7B-223ENST00000611614 GPCPD1Q9NPB8 672 aa15.65■□□□□ 0.1
COPS7B-223ENST00000611614 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.65■□□□□ 0.1
COPS7B-223ENST00000611614 SNHG28P0DPA3 235 aa15.65■□□□□ 0.1
COPS7B-223ENST00000611614 SLC1A4P43007 532 aa15.65■□□□□ 0.1
COPS7B-223ENST00000611614 TBX2Q13207 712 aaPredicted RBP15.65■□□□□ 0.1
COPS7B-223ENST00000611614 GPR162Q16538 588 aa15.65■□□□□ 0.1
COPS7B-223ENST00000611614 HEATR3Q7Z4Q2 680 aa15.65■□□□□ 0.1
COPS7B-223ENST00000611614 HOMER1Q86YM7 354 aa15.65■□□□□ 0.1
COPS7B-223ENST00000611614 BLIDQ8IZY5 108 aa15.65■□□□□ 0.1
COPS7B-223ENST00000611614 GSDMAQ96QA5 445 aa15.65■□□□□ 0.1
COPS7B-223ENST00000611614 PYM1Q9BRP8 204 aaKnown RBP15.65■□□□□ 0.1
COPS7B-223ENST00000611614 DEFB129Q9H1M3 183 aa15.65■□□□□ 0.1
COPS7B-223ENST00000611614 TPM1P09493 284 aa15.64■□□□□ 0.09
COPS7B-223ENST00000611614 ZNF543Q08ER8 600 aa15.64■□□□□ 0.09
COPS7B-223ENST00000611614 HSP90AA4PQ58FG1 418 aa15.64■□□□□ 0.09
COPS7B-223ENST00000611614 DPY19L2Q6NUT2 758 aa15.64■□□□□ 0.09
COPS7B-223ENST00000611614 CYTH3O43739 400 aa15.63■□□□□ 0.09
COPS7B-223ENST00000611614 ETF1P62495 437 aaKnown RBP15.63■□□□□ 0.09
COPS7B-223ENST00000611614 C9orf131Q5VYM1 1079 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms