RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 ASB14A6NK59 587 aa25.55■■□□□ 1.68
CBWD3-207ENST00000611426 ADCY6O43306 1168 aa25.55■■□□□ 1.68
CBWD3-207ENST00000611426 ICAM1P05362 532 aa25.55■■□□□ 1.68
CBWD3-207ENST00000611426 MUM1L1Q5H9M0 696 aa25.55■■□□□ 1.68
CBWD3-207ENST00000611426 CCSAPQ6IQ19 270 aaPredicted RBP25.55■■□□□ 1.68
CBWD3-207ENST00000611426 CWC27Q6UX04 472 aaKnown RBP25.55■■□□□ 1.68
CBWD3-207ENST00000611426 BTNL9Q6UXG8 535 aa25.55■■□□□ 1.68
CBWD3-207ENST00000611426 TTC14Q96N46 770 aa25.55■■□□□ 1.68
CBWD3-207ENST00000611426 KATNBL1Q9H079 304 aa25.55■■□□□ 1.68
CBWD3-207ENST00000611426 RANBP17Q9H2T7 1088 aaKnown RBP25.55■■□□□ 1.68
CBWD3-207ENST00000611426 GPCPD1Q9NPB8 672 aa25.55■■□□□ 1.68
CBWD3-207ENST00000611426 DIAPH3Q9NSV4 1193 aa25.55■■□□□ 1.68
CBWD3-207ENST00000611426 FRMPD2Q68DX3 1309 aaPredicted RBP25.55■■□□□ 1.68
CBWD3-207ENST00000611426 ZNF213O14771 459 aa25.54■■□□□ 1.68
CBWD3-207ENST00000611426 CST5P28325 142 aaPredicted RBP25.54■■□□□ 1.68
CBWD3-207ENST00000611426 GJA9P57773 515 aa25.54■■□□□ 1.68
CBWD3-207ENST00000611426 SYDE2Q5VT97 1194 aa25.54■■□□□ 1.68
CBWD3-207ENST00000611426 TBC1D10CQ8IV04 446 aa25.54■■□□□ 1.68
CBWD3-207ENST00000611426 PCSK9Q8NBP7 692 aaKnown RBP25.54■■□□□ 1.68
CBWD3-207ENST00000611426 GLT1D1Q96MS3 346 aa25.54■■□□□ 1.68
CBWD3-207ENST00000611426 CYP39A1Q9NYL5 469 aa25.54■■□□□ 1.68
CBWD3-207ENST00000611426 IRX5P78411 483 aaPredicted RBP25.53■■□□□ 1.68
CBWD3-207ENST00000611426 GNASQ5JWF2 1037 aa25.53■■□□□ 1.68
CBWD3-207ENST00000611426 NSMFQ6X4W1 530 aa25.53■■□□□ 1.68
CBWD3-207ENST00000611426 ESR2Q92731 530 aa25.53■■□□□ 1.68
CBWD3-207ENST00000611426 UPF3AQ9H1J1 476 aaKnown RBP25.53■■□□□ 1.68
CBWD3-207ENST00000611426 COL6A3P12111 3177 aa25.53■■□□□ 1.68
CBWD3-207ENST00000611426 HIP1O00291 1037 aa25.52■■□□□ 1.68
CBWD3-207ENST00000611426 ASGR1P07306 291 aa25.52■■□□□ 1.68
CBWD3-207ENST00000611426 GSPT1P15170 499 aaKnown RBP25.52■■□□□ 1.68
CBWD3-207ENST00000611426 TNFAIP2Q03169 654 aa25.52■■□□□ 1.68
CBWD3-207ENST00000611426 SHHQ15465 462 aa25.52■■□□□ 1.68
CBWD3-207ENST00000611426 NOL8Q76FK4 1167 aaKnown RBP25.52■■□□□ 1.68
CBWD3-207ENST00000611426 ANKRD33Q7Z3H0 272 aa25.52■■□□□ 1.68
CBWD3-207ENST00000611426 VTI1AQ96AJ9 217 aa25.52■■□□□ 1.68
CBWD3-207ENST00000611426 TOX2Q96NM4 488 aa25.52■■□□□ 1.68
CBWD3-207ENST00000611426 TMEM39AQ9NV64 488 aa25.52■■□□□ 1.68
CBWD3-207ENST00000611426 ELP1O95163 1332 aa25.51■■□□□ 1.67
CBWD3-207ENST00000611426 DCDC2CA8MYV0 355 aa25.51■■□□□ 1.67
CBWD3-207ENST00000611426 KIAA0355O15063 1070 aa25.51■■□□□ 1.67
CBWD3-207ENST00000611426 PDHBP11177 359 aa25.51■■□□□ 1.67
CBWD3-207ENST00000611426 RAG1P15918 1043 aa25.51■■□□□ 1.67
CBWD3-207ENST00000611426 ITGB8P26012 769 aa25.5■■□□□ 1.67
CBWD3-207ENST00000611426 FAAP100Q0VG06 881 aa25.5■■□□□ 1.67
CBWD3-207ENST00000611426 C9orf50Q5SZB4 431 aa25.5■■□□□ 1.67
CBWD3-207ENST00000611426 MTMR10Q9NXD2 777 aa25.5■■□□□ 1.67
CBWD3-207ENST00000611426 ASTN1O14525 1302 aa25.49■■□□□ 1.67
CBWD3-207ENST00000611426 NEDD4P46934 1319 aa25.49■■□□□ 1.67
CBWD3-207ENST00000611426 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.49■■□□□ 1.67
CBWD3-207ENST00000611426 ZKSCAN3Q9BRR0 538 aa25.49■■□□□ 1.67
CBWD3-207ENST00000611426 DDX49Q9Y6V7 483 aaKnown RBP25.49■■□□□ 1.67
CBWD3-207ENST00000611426 ZNF543Q08ER8 600 aa25.48■■□□□ 1.67
CBWD3-207ENST00000611426 BAATQ14032 418 aaPredicted RBP25.48■■□□□ 1.67
CBWD3-207ENST00000611426 EEPD1Q7L9B9 569 aa25.48■■□□□ 1.67
CBWD3-207ENST00000611426 PURBQ96QR8 312 aaKnown RBP25.48■■□□□ 1.67
CBWD3-207ENST00000611426 MROH7Q68CQ1 1323 aa25.47■■□□□ 1.67
CBWD3-207ENST00000611426 NT5C2P49902 561 aa25.47■■□□□ 1.67
CBWD3-207ENST00000611426 DGKHQ86XP1 1220 aa25.47■■□□□ 1.67
CBWD3-207ENST00000611426 ADD3Q9UEY8 706 aaKnown RBP25.47■■□□□ 1.67
CBWD3-207ENST00000611426 PNMA2Q9UL42 364 aa25.47■■□□□ 1.67
CBWD3-207ENST00000611426 CTAGE5O15320 804 aa25.46■■□□□ 1.67
CBWD3-207ENST00000611426 EIF5BO60841 1220 aaKnown RBP25.46■■□□□ 1.67
CBWD3-207ENST00000611426 SNHG28P0DPA3 235 aa25.46■■□□□ 1.67
CBWD3-207ENST00000611426 CDK7P50613 346 aa25.46■■□□□ 1.67
CBWD3-207ENST00000611426 NKX3-2P78367 333 aa25.46■■□□□ 1.67
CBWD3-207ENST00000611426 BEX3Q00994 111 aa25.46■■□□□ 1.67
CBWD3-207ENST00000611426 CCDC178Q5BJE1 867 aa25.46■■□□□ 1.67
CBWD3-207ENST00000611426 IQSEC1Q6DN90 963 aa25.46■■□□□ 1.67
CBWD3-207ENST00000611426 IQCA1Q86XH1 822 aa25.46■■□□□ 1.67
CBWD3-207ENST00000611426 FBXO16Q8IX29 292 aaPredicted RBP25.46■■□□□ 1.67
CBWD3-207ENST00000611426 SLC17A8Q8NDX2 589 aa25.46■■□□□ 1.67
CBWD3-207ENST00000611426 DSCC1Q9BVC3 393 aa25.46■■□□□ 1.67
CBWD3-207ENST00000611426 AP5M1Q9H0R1 490 aa25.46■■□□□ 1.67
CBWD3-207ENST00000611426 PDGFCQ9NRA1 345 aa25.46■■□□□ 1.67
CBWD3-207ENST00000611426 GNEQ9Y223 722 aaKnown RBP25.46■■□□□ 1.67
CBWD3-207ENST00000611426 A0A0U1RQG5 324 aaPredicted RBP25.45■■□□□ 1.67
CBWD3-207ENST00000611426 PTPDC1A2A3K4 754 aa25.45■■□□□ 1.67
CBWD3-207ENST00000611426 NFIBO00712 420 aa25.45■■□□□ 1.67
CBWD3-207ENST00000611426 KDM4AO75164 1064 aa25.45■■□□□ 1.67
CBWD3-207ENST00000611426 SMPD1P17405 629 aa25.45■■□□□ 1.67
CBWD3-207ENST00000611426 FAM109BQ6ICB4 259 aaPredicted RBP25.45■■□□□ 1.67
CBWD3-207ENST00000611426 TAPT1Q6NXT6 567 aa25.45■■□□□ 1.67
CBWD3-207ENST00000611426 TLK2Q86UE8 772 aa25.45■■□□□ 1.67
CBWD3-207ENST00000611426 VTA1Q9NP79 307 aa25.45■■□□□ 1.67
CBWD3-207ENST00000611426 STXBP5LQ9Y2K9 1186 aa25.45■■□□□ 1.67
CBWD3-207ENST00000611426 ARVCFO00192 962 aa25.44■■□□□ 1.66
CBWD3-207ENST00000611426 DYNC1LI2O43237 492 aaPredicted RBP25.44■■□□□ 1.66
CBWD3-207ENST00000611426 FPGSQ05932 587 aa25.44■■□□□ 1.66
CBWD3-207ENST00000611426 IMMTQ16891 758 aaKnown RBP25.44■■□□□ 1.66
CBWD3-207ENST00000611426 GPATCH4Q5T3I0 446 aaKnown RBP25.44■■□□□ 1.66
CBWD3-207ENST00000611426 MORC4Q8TE76 937 aa25.44■■□□□ 1.66
CBWD3-207ENST00000611426 CTNNA3Q9UI47 895 aa25.44■■□□□ 1.66
CBWD3-207ENST00000611426 CDC45O75419 566 aa25.44■■□□□ 1.66
CBWD3-207ENST00000611426 GOLGA8HP0CJ92 632 aa25.44■■□□□ 1.66
CBWD3-207ENST00000611426 CALML3P27482 149 aa25.44■■□□□ 1.66
CBWD3-207ENST00000611426 FSCN1Q16658 493 aaKnown RBP25.44■■□□□ 1.66
CBWD3-207ENST00000611426 KIAA1211Q6ZU35 1233 aa25.44■■□□□ 1.66
CBWD3-207ENST00000611426 CLEC4DQ8WXI8 215 aa25.44■■□□□ 1.66
CBWD3-207ENST00000611426 LAMA4Q16363 1823 aa25.43■■□□□ 1.66
CBWD3-207ENST00000611426 LCTP09848 1927 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms