RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 PPP1R13BQ96KQ4 1090 aa15.35■□□□□ 0.05
NEK3-205ENST00000610828 TMX1Q9H3N1 280 aa15.35■□□□□ 0.05
NEK3-205ENST00000610828 TDRD3Q9H7E2 651 aaKnown RBP15.35■□□□□ 0.05
NEK3-205ENST00000610828 RWDD2AQ9UIY3 292 aa15.35■□□□□ 0.05
NEK3-205ENST00000610828 RGPD3A6NKT7 1758 aaPredicted RBP15.35■□□□□ 0.05
NEK3-205ENST00000610828 RGPD4Q7Z3J3 1758 aa15.35■□□□□ 0.05
NEK3-205ENST00000610828 ZBTB5O15062 677 aa15.35■□□□□ 0.05
NEK3-205ENST00000610828 PPIP5K2O43314 1243 aa15.35■□□□□ 0.05
NEK3-205ENST00000610828 RRP9O43818 475 aaKnown RBP15.35■□□□□ 0.05
NEK3-205ENST00000610828 C21orf2O43822 256 aa15.35■□□□□ 0.05
NEK3-205ENST00000610828 PRCPP42785 496 aa15.35■□□□□ 0.05
NEK3-205ENST00000610828 TNNI2P48788 182 aa15.35■□□□□ 0.05
NEK3-205ENST00000610828 UBE2SQ16763 222 aa15.35■□□□□ 0.05
NEK3-205ENST00000610828 NELFBQ8WX92 580 aa15.35■□□□□ 0.05
NEK3-205ENST00000610828 CTAGE1Q96RT6 745 aa15.35■□□□□ 0.05
NEK3-205ENST00000610828 RIC8AQ9NPQ8 531 aa15.35■□□□□ 0.05
NEK3-205ENST00000610828 KBTBD4Q9NVX7 518 aa15.35■□□□□ 0.05
NEK3-205ENST00000610828 SIPA1L1O43166 1804 aa15.35■□□□□ 0.05
NEK3-205ENST00000610828 ADKP55263 362 aaKnown RBP15.34■□□□□ 0.05
NEK3-205ENST00000610828 ORC2Q13416 577 aaPredicted RBP15.34■□□□□ 0.05
NEK3-205ENST00000610828 CALCRLQ16602 461 aa15.34■□□□□ 0.05
NEK3-205ENST00000610828 PPP1R18Q6NYC8 613 aa15.34■□□□□ 0.05
NEK3-205ENST00000610828 KANSL2Q9H9L4 492 aa15.34■□□□□ 0.05
NEK3-205ENST00000610828 TDP2O95551 362 aa15.34■□□□□ 0.05
NEK3-205ENST00000610828 MYL1P05976 194 aa15.34■□□□□ 0.05
NEK3-205ENST00000610828 SLC1A4P43007 532 aa15.34■□□□□ 0.05
NEK3-205ENST00000610828 KMT5BQ4FZB7 885 aa15.34■□□□□ 0.05
NEK3-205ENST00000610828 FILIP1LQ4L180 1135 aa15.34■□□□□ 0.05
NEK3-205ENST00000610828 CUL5Q93034 780 aa15.34■□□□□ 0.05
NEK3-205ENST00000610828 CAMKK2Q96RR4 588 aa15.34■□□□□ 0.05
NEK3-205ENST00000610828 CUEDC2Q9H467 287 aa15.34■□□□□ 0.05
NEK3-205ENST00000610828 ADD3Q9UEY8 706 aaKnown RBP15.34■□□□□ 0.05
NEK3-205ENST00000610828 ZNF646O15015 1829 aaPredicted RBP15.34■□□□□ 0.05
NEK3-205ENST00000610828 YDJCA8MPS7 323 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 SLC37A4O43826 429 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 GDF11O95390 407 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 SEPT2Q15019 361 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 CREBRFQ8IUR6 639 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 IGSF22Q8N9C0 903 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 TC2NQ8N9U0 490 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 SUPT20HQ8NEM7 779 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 NYAP2Q9P242 653 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 CCT6AP40227 531 aaKnown RBP15.33■□□□□ 0.04
NEK3-205ENST00000610828 ICA1Q05084 483 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 KCNB1Q14721 858 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 SLFN13Q68D06 897 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 CC2D2BQ6DHV5 1058 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 TATDN1Q6P1N9 297 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 TMEM139Q8IV31 216 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 MTMR9Q96QG7 549 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 BAG1Q99933 345 aaPredicted RBP15.33■□□□□ 0.04
NEK3-205ENST00000610828 MAGEF1Q9HAY2 307 aa15.33■□□□□ 0.04
NEK3-205ENST00000610828 KIF2AO00139 706 aaPredicted RBP15.32■□□□□ 0.04
NEK3-205ENST00000610828 ARHGAP6O43182 974 aa15.32■□□□□ 0.04
NEK3-205ENST00000610828 KLRC4O43908 158 aa15.32■□□□□ 0.04
NEK3-205ENST00000610828 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
NEK3-205ENST00000610828 MRPL12P52815 198 aaKnown RBP15.32■□□□□ 0.04
NEK3-205ENST00000610828 MKL1Q969V6 931 aa15.32■□□□□ 0.04
NEK3-205ENST00000610828 MTMR8Q96EF0 704 aa15.32■□□□□ 0.04
NEK3-205ENST00000610828 CALML4Q96GE6 196 aa15.32■□□□□ 0.04
NEK3-205ENST00000610828 PRMT6Q96LA8 375 aaPredicted RBP15.32■□□□□ 0.04
NEK3-205ENST00000610828 PDGFDQ9GZP0 370 aaPredicted RBP15.32■□□□□ 0.04
NEK3-205ENST00000610828 PSTPIP2Q9H939 334 aa15.32■□□□□ 0.04
NEK3-205ENST00000610828 LRWD1Q9UFC0 647 aa15.32■□□□□ 0.04
NEK3-205ENST00000610828 CCP110O43303 1012 aa15.32■□□□□ 0.04
NEK3-205ENST00000610828 EDIL3O43854 480 aa15.32■□□□□ 0.04
NEK3-205ENST00000610828 TMEM266Q2M3C6 531 aa15.32■□□□□ 0.04
NEK3-205ENST00000610828 ABCB5Q2M3G0 1257 aa15.32■□□□□ 0.04
NEK3-205ENST00000610828 TMEM179Q6ZVK1 233 aa15.32■□□□□ 0.04
NEK3-205ENST00000610828 ADSSL1Q8N142 457 aa15.32■□□□□ 0.04
NEK3-205ENST00000610828 KIF18AQ8NI77 898 aa15.32■□□□□ 0.04
NEK3-205ENST00000610828 DCAF4Q8WV16 495 aa15.32■□□□□ 0.04
NEK3-205ENST00000610828 MMTAG2Q9BU76 263 aaKnown RBP15.32■□□□□ 0.04
NEK3-205ENST00000610828 TRIM49BA6NDI0 452 aa15.31■□□□□ 0.04
NEK3-205ENST00000610828 RHOBTB3O94955 611 aa15.31■□□□□ 0.04
NEK3-205ENST00000610828 CLK2P49760 499 aaKnown RBP15.31■□□□□ 0.04
NEK3-205ENST00000610828 KRT31Q15323 416 aa15.31■□□□□ 0.04
NEK3-205ENST00000610828 QRICH1Q2TAL8 776 aa15.31■□□□□ 0.04
NEK3-205ENST00000610828 TRIM9Q9C026 710 aa15.31■□□□□ 0.04
NEK3-205ENST00000610828 N4BP3O15049 544 aa15.31■□□□□ 0.04
NEK3-205ENST00000610828 STX10O60499 249 aa15.31■□□□□ 0.04
NEK3-205ENST00000610828 STIM1Q13586 685 aa15.31■□□□□ 0.04
NEK3-205ENST00000610828 SIAH1Q8IUQ4 282 aa15.31■□□□□ 0.04
NEK3-205ENST00000610828 ANKRD20A12PQ8NF67 263 aa15.31■□□□□ 0.04
NEK3-205ENST00000610828 CPLX3Q8WVH0 158 aa15.31■□□□□ 0.04
NEK3-205ENST00000610828 CSRNP1Q96S65 589 aa15.31■□□□□ 0.04
NEK3-205ENST00000610828 PCDHA1Q9Y5I3 950 aa15.31■□□□□ 0.04
NEK3-205ENST00000610828 POTEMA6NI47 508 aa15.3■□□□□ 0.04
NEK3-205ENST00000610828 KCNJ18B7U540 433 aa15.3■□□□□ 0.04
NEK3-205ENST00000610828 AKR1B15C9JRZ8 316 aaPredicted RBP15.3■□□□□ 0.04
NEK3-205ENST00000610828 FXR2P51116 673 aaKnown RBP eCLIP15.3■□□□□ 0.04
NEK3-205ENST00000610828 ASIC1P78348 528 aa15.3■□□□□ 0.04
NEK3-205ENST00000610828 SPAG1Q07617 926 aa15.3■□□□□ 0.04
NEK3-205ENST00000610828 KCNJ12Q14500 433 aa15.3■□□□□ 0.04
NEK3-205ENST00000610828 CDC37Q16543 378 aaPredicted RBP15.3■□□□□ 0.04
NEK3-205ENST00000610828 TCP11X2Q5H9J9 407 aa15.3■□□□□ 0.04
NEK3-205ENST00000610828 PPFIBP1Q86W92 1011 aa15.3■□□□□ 0.04
NEK3-205ENST00000610828 GIMAP8Q8ND71 665 aaPredicted RBP15.3■□□□□ 0.04
NEK3-205ENST00000610828 CDK5RAP3Q96JB5 506 aa15.3■□□□□ 0.04
NEK3-205ENST00000610828 RAB34Q9BZG1 259 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms