RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ASNSP08243 561 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 EEF2P13639 858 aaKnown RBP8.08□□□□□ -1.12
CSDE1-218ENST00000610726 MCM3P25205 808 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 USP17L24Q0WX57 530 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 MCM6Q14566 821 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 LRRC41Q15345 812 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 KIAA0753Q2KHM9 967 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 SUPT20HL1Q3ZLR7 823 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 USP17L6PQ6QN14 398 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 RRAGAQ7L523 313 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 FAM178BQ8IXR5 827 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 GJA10Q969M2 543 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 SLC4A9Q96Q91 983 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 STK24Q9Y6E0 443 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 REREQ9P2R6 1566 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 SIGLEC1Q9BZZ2 1709 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 H0YHG0 523 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 RHOXF2BP0C7M4 288 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 GYS1P13807 737 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 CASP1P29466 404 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 RNASE9P60153 205 aaKnown RBP8.08□□□□□ -1.12
CSDE1-218ENST00000610726 TRIM14Q14142 442 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 PFKFB3Q16875 520 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-218ENST00000610726 FAM102BQ5T8I3 360 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 SPATA1Q5VX52 437 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 MCTP2Q6DN12 878 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 CYP26C1Q6V0L0 522 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 CCDC84Q86UT8 332 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-218ENST00000610726 TXNRD3Q86VQ6 643 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 RHOXF2Q9BQY4 288 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 DESI2Q9BSY9 194 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 KIF20BQ96Q89 1820 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 ANKRD62A6NC57 917 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 ERICH4A6NGS2 130 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 USP17L10C9JJH3 530 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 CKAP4Q07065 602 aaKnown RBP8.08□□□□□ -1.12
CSDE1-218ENST00000610726 ZNF512BQ96KM6 892 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-218ENST00000610726 TEKT3Q9BXF9 490 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 SCAF8Q9UPN6 1271 aaKnown RBP8.08□□□□□ -1.12
CSDE1-218ENST00000610726 RRP9O43818 475 aaKnown RBP8.07□□□□□ -1.12
CSDE1-218ENST00000610726 MAGEA1P43355 309 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 CASP7P55210 303 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 ANTXR2P58335 489 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 TMTC1Q8IUR5 882 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 IGDCC4Q8TDY8 1250 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 ZNF526Q8TF50 670 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-218ENST00000610726 PSMB7Q99436 277 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 SUGCTQ9HAC7 445 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 LARSQ9P2J5 1176 aaKnown RBP8.07□□□□□ -1.12
CSDE1-218ENST00000610726 WDR19Q8NEZ3 1342 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 F5H6K3 240 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 LAD1O00515 517 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 KLRC3Q07444 240 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 R3HDM1Q15032 1099 aaKnown RBP8.07□□□□□ -1.12
CSDE1-218ENST00000610726 EZH2Q15910 746 aaKnown RBP8.07□□□□□ -1.12
CSDE1-218ENST00000610726 ARHGAP44Q17R89 818 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 WDR44Q5JSH3 913 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 C3orf67Q6ZVT6 689 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 NEDD1Q8NHV4 660 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 TIGD1Q96MW7 591 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 ZNF577Q9BSK1 485 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 ARFGAP3Q9NP61 516 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 EXOC7Q9UPT5 735 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 RABGAP1Q9Y3P9 1069 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 KIF28PB7ZC32 967 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 POTEB2H3BUK9 544 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 ORC4O43929 436 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 TUBB4AP04350 444 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 EIF2AK2P19525 551 aaKnown RBP8.07□□□□□ -1.12
CSDE1-218ENST00000610726 TNFAIP3P21580 790 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 PTPREP23469 700 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 GOLGA8FQ08AF8 430 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 GOLGA8DPQ0D2H9 430 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 SLC9C1Q4G0N8 1177 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 FAM83BQ5T0W9 1011 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 TYW1BQ6NUM6 668 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 EEPD1Q7L9B9 569 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 TDRD7Q8NHU6 1098 aaKnown RBP8.07□□□□□ -1.12
CSDE1-218ENST00000610726 NUP58Q9BVL2 599 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 SELENOOQ9BVL4 669 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 PLVAPQ9BX97 442 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 ARMCX3Q9UH62 379 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-218ENST00000610726 MAN1B1Q9UKM7 699 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 GOLGA6L10A0A0M3HER8 536 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 XRCC5P13010 732 aaKnown RBP8.07□□□□□ -1.12
CSDE1-218ENST00000610726 PLCG1P19174 1290 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 KLHL30Q0D2K2 578 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 MKRN3Q13064 507 aaKnown RBP8.07□□□□□ -1.12
CSDE1-218ENST00000610726 ADAM9Q13443 819 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 ODR4Q5SWX8 454 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 OTUD6AQ7L8S5 288 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 SRBD1Q8N5C6 995 aaKnown RBP8.07□□□□□ -1.12
CSDE1-218ENST00000610726 METTL13Q8N6R0 699 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 LMBR1Q8WVP7 490 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 MRFAP1L1Q96HT8 127 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 AK8Q96MA6 479 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 MTA3Q9BTC8 594 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 ANO3Q9BYT9 981 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 PRDM10Q9NQV6 1147 aa8.07□□□□□ -1.12
CSDE1-218ENST00000610726 COL4A3BPQ9Y5P4 624 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms