RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 GLIS3Q8NEA6 775 aa22.79■■□□□ 1.24
SSBP3-216ENST00000610401 UBA5Q9GZZ9 404 aa22.79■■□□□ 1.24
SSBP3-216ENST00000610401 BIN2Q9UBW5 565 aaPredicted RBP22.79■■□□□ 1.24
SSBP3-216ENST00000610401 ECM29Q5VYK3 1845 aa22.78■■□□□ 1.24
SSBP3-216ENST00000610401 ITIH6Q6UXX5 1313 aa22.78■■□□□ 1.24
SSBP3-216ENST00000610401 ZNF263O14978 683 aa22.78■■□□□ 1.24
SSBP3-216ENST00000610401 CCDC181Q5TID7 509 aa22.78■■□□□ 1.24
SSBP3-216ENST00000610401 RRAGAQ7L523 313 aa22.78■■□□□ 1.24
SSBP3-216ENST00000610401 CCDC87Q9NVE4 849 aa22.78■■□□□ 1.24
SSBP3-216ENST00000610401 ZEB2O60315 1214 aa22.78■■□□□ 1.24
SSBP3-216ENST00000610401 CYLC1P35663 651 aaPredicted RBP22.78■■□□□ 1.24
SSBP3-216ENST00000610401 SF3A3Q12874 501 aaKnown RBP eCLIP22.78■■□□□ 1.246e-12■■■■■ 79.1
SSBP3-216ENST00000610401 DZIP1Q86YF9 867 aaKnown RBP22.78■■□□□ 1.24
SSBP3-216ENST00000610401 SECISBP2LQ93073 1101 aaKnown RBP22.78■■□□□ 1.24
SSBP3-216ENST00000610401 GOLGA6BA6NDN3 693 aa22.77■■□□□ 1.24
SSBP3-216ENST00000610401 SEMA3EO15041 775 aa22.77■■□□□ 1.24
SSBP3-216ENST00000610401 ITPK1Q13572 414 aa22.77■■□□□ 1.24
SSBP3-216ENST00000610401 INTS5Q6P9B9 1019 aaKnown RBP22.77■■□□□ 1.24
SSBP3-216ENST00000610401 IFIH1Q9BYX4 1025 aaKnown RBP22.77■■□□□ 1.24
SSBP3-216ENST00000610401 MINPP1Q9UNW1 487 aa22.77■■□□□ 1.24
SSBP3-216ENST00000610401 GOLGA6CA6NDK9 693 aa22.77■■□□□ 1.24
SSBP3-216ENST00000610401 RASSF10A6NK89 507 aa22.77■■□□□ 1.24
SSBP3-216ENST00000610401 KCNQ2O43526 872 aa22.77■■□□□ 1.24
SSBP3-216ENST00000610401 GOLGA6DP0CG33 693 aa22.77■■□□□ 1.24
SSBP3-216ENST00000610401 CABP7Q86V35 215 aa22.77■■□□□ 1.24
SSBP3-216ENST00000610401 DUSP9Q99956 384 aaKnown RBP22.77■■□□□ 1.24
SSBP3-216ENST00000610401 GOLGA6AQ9NYA3 693 aa22.77■■□□□ 1.24
SSBP3-216ENST00000610401 CACNB1Q02641 598 aaPredicted RBP22.77■■□□□ 1.23
SSBP3-216ENST00000610401 USP17L2Q6R6M4 530 aa22.77■■□□□ 1.23
SSBP3-216ENST00000610401 PACS2Q86VP3 889 aa22.77■■□□□ 1.23
SSBP3-216ENST00000610401 MAPKAPK5Q8IW41 473 aa22.77■■□□□ 1.23
SSBP3-216ENST00000610401 CRNKL1Q9BZJ0 848 aaKnown RBP22.77■■□□□ 1.23
SSBP3-216ENST00000610401 COL18A1P39060 1754 aa22.76■■□□□ 1.23
SSBP3-216ENST00000610401 TSPY3P0CV98 308 aa22.76■■□□□ 1.23
SSBP3-216ENST00000610401 TSPY8P0CW00 308 aa22.76■■□□□ 1.23
SSBP3-216ENST00000610401 NAPAP54920 295 aa22.76■■□□□ 1.23
SSBP3-216ENST00000610401 KRT83P78385 493 aa22.76■■□□□ 1.23
SSBP3-216ENST00000610401 NSUN4Q96CB9 384 aaKnown RBP22.76■■□□□ 1.23
SSBP3-216ENST00000610401 CAPN11Q9UMQ6 739 aa22.76■■□□□ 1.23
SSBP3-216ENST00000610401 TNS2Q63HR2 1409 aa22.76■■□□□ 1.23
SSBP3-216ENST00000610401 IVLP07476 585 aa22.76■■□□□ 1.23
SSBP3-216ENST00000610401 CALM1P0DP23 149 aa22.76■■□□□ 1.23
SSBP3-216ENST00000610401 CALM2P0DP24 149 aa22.76■■□□□ 1.23
SSBP3-216ENST00000610401 CALM3P0DP25 149 aa22.76■■□□□ 1.23
SSBP3-216ENST00000610401 RASSF7Q02833 373 aa22.76■■□□□ 1.23
SSBP3-216ENST00000610401 RCSD1Q6JBY9 416 aa22.76■■□□□ 1.23
SSBP3-216ENST00000610401 TGFBRAP1Q8WUH2 860 aa22.76■■□□□ 1.23
SSBP3-216ENST00000610401 IL17RBQ9NRM6 502 aa22.76■■□□□ 1.23
SSBP3-216ENST00000610401 TMEM260Q9NX78 707 aa22.76■■□□□ 1.23
SSBP3-216ENST00000610401 ALS2Q96Q42 1657 aa22.75■■□□□ 1.23
SSBP3-216ENST00000610401 LAMB4A4D0S4 1761 aa22.75■■□□□ 1.23
SSBP3-216ENST00000610401 GUCY2FP51841 1108 aa22.75■■□□□ 1.23
SSBP3-216ENST00000610401 DHX37Q8IY37 1157 aaKnown RBP22.75■■□□□ 1.23
SSBP3-216ENST00000610401 TCP11L1Q9NUJ3 509 aa22.75■■□□□ 1.23
SSBP3-216ENST00000610401 PCDHA6Q9UN73 950 aa22.75■■□□□ 1.23
SSBP3-216ENST00000610401 PCDHA8Q9Y5H6 950 aa22.75■■□□□ 1.23
SSBP3-216ENST00000610401 CYTH3O43739 400 aa22.75■■□□□ 1.23
SSBP3-216ENST00000610401 EIF4A3P38919 411 aaKnown RBP22.75■■□□□ 1.23
SSBP3-216ENST00000610401 GFPT1Q06210 699 aaPredicted RBP22.75■■□□□ 1.23
SSBP3-216ENST00000610401 TTI2Q6NXR4 508 aa22.75■■□□□ 1.23
SSBP3-216ENST00000610401 ZHX3Q9H4I2 956 aa22.75■■□□□ 1.23
SSBP3-216ENST00000610401 KLRC4O43908 158 aa22.75■■□□□ 1.23
SSBP3-216ENST00000610401 NTSR2O95665 410 aa22.75■■□□□ 1.23
SSBP3-216ENST00000610401 TRIM14Q14142 442 aa22.75■■□□□ 1.23
SSBP3-216ENST00000610401 SLC35G1Q2M3R5 365 aa22.75■■□□□ 1.23
SSBP3-216ENST00000610401 C4orf32Q8N8J7 132 aa22.75■■□□□ 1.23
SSBP3-216ENST00000610401 PCDHA4Q9UN74 947 aa22.75■■□□□ 1.23
SSBP3-216ENST00000610401 ERVV-1B6SEH8 477 aa22.74■■□□□ 1.23
SSBP3-216ENST00000610401 PSMD14O00487 310 aa22.74■■□□□ 1.23
SSBP3-216ENST00000610401 CAMTA2O94983 1202 aa22.74■■□□□ 1.23
SSBP3-216ENST00000610401 LONP1P36776 959 aaKnown RBP22.74■■□□□ 1.23
SSBP3-216ENST00000610401 DNM2P50570 870 aa22.74■■□□□ 1.23
SSBP3-216ENST00000610401 ZNF507Q8TCN5 953 aa22.74■■□□□ 1.23
SSBP3-216ENST00000610401 NUTM2BA6NNL0 878 aaPredicted RBP22.74■■□□□ 1.23
SSBP3-216ENST00000610401 NUTM2EB1AL46 878 aaPredicted RBP22.74■■□□□ 1.23
SSBP3-216ENST00000610401 DDAH1O94760 285 aa22.74■■□□□ 1.23
SSBP3-216ENST00000610401 MAP9Q49MG5 647 aa22.74■■□□□ 1.23
SSBP3-216ENST00000610401 GOLPH3Q9H4A6 298 aa22.74■■□□□ 1.23
SSBP3-216ENST00000610401 COL1A1P02452 1464 aaPredicted RBP22.74■■□□□ 1.23
SSBP3-216ENST00000610401 LOC102724428A0A0B4J2F2 783 aa22.73■■□□□ 1.23
SSBP3-216ENST00000610401 KIF5BP33176 963 aa22.73■■□□□ 1.23
SSBP3-216ENST00000610401 SIK1P57059 783 aa22.73■■□□□ 1.23
SSBP3-216ENST00000610401 FAM76AQ8TAV0 307 aa22.73■■□□□ 1.23
SSBP3-216ENST00000610401 P2RX5Q93086 422 aa22.73■■□□□ 1.23
SSBP3-216ENST00000610401 DNAJC7Q99615 494 aa22.73■■□□□ 1.23
SSBP3-216ENST00000610401 PSD3Q9NYI0 1048 aa22.73■■□□□ 1.23
SSBP3-216ENST00000610401 SALL4Q9UJQ4 1053 aa22.73■■□□□ 1.23
SSBP3-216ENST00000610401 KRT14P02533 472 aa22.73■■□□□ 1.23
SSBP3-216ENST00000610401 GRIK5Q16478 980 aa22.73■■□□□ 1.23
SSBP3-216ENST00000610401 CLEC10AQ8IUN9 316 aa22.73■■□□□ 1.23
SSBP3-216ENST00000610401 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.73■■□□□ 1.23
SSBP3-216ENST00000610401 AGPSO00116 658 aa22.73■■□□□ 1.23
SSBP3-216ENST00000610401 CCNI2Q6ZMN8 369 aaPredicted RBP22.73■■□□□ 1.23
SSBP3-216ENST00000610401 BCAS4Q8TDM0 211 aa22.73■■□□□ 1.23
SSBP3-216ENST00000610401 MYO1AQ9UBC5 1043 aa22.73■■□□□ 1.23
SSBP3-216ENST00000610401 FTCDO95954 541 aa22.72■■□□□ 1.23
SSBP3-216ENST00000610401 TRADDQ15628 312 aa22.72■■□□□ 1.23
SSBP3-216ENST00000610401 CACNA2D4Q7Z3S7 1137 aa22.72■■□□□ 1.23
SSBP3-216ENST00000610401 ARL8AQ96BM9 186 aa22.72■■□□□ 1.23
SSBP3-216ENST00000610401 FRMPD2Q68DX3 1309 aaPredicted RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms