RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 TBCKQ8TEA7 893 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 GJA10Q969M2 543 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 FAM204AQ9H8W3 233 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 GJB4Q9NTQ9 266 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 LARSQ9P2J5 1176 aaKnown RBP15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 SERPINB13Q9UIV8 391 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 ADGRB3O60242 1522 aa15.71■□□□□ 0.1
PCDHB16-201ENST00000609684 CROCC2H7BZ55 1655 aa15.71■□□□□ 0.1
PCDHB16-201ENST00000609684 QRICH2Q9H0J4 1663 aa15.71■□□□□ 0.1
PCDHB16-201ENST00000609684 SNAP23O00161 211 aa15.71■□□□□ 0.1
PCDHB16-201ENST00000609684 KCNK3O14649 394 aa15.71■□□□□ 0.1
PCDHB16-201ENST00000609684 GLG1Q92896 1179 aa15.71■□□□□ 0.1
PCDHB16-201ENST00000609684 SWAP70Q9UH65 585 aa15.71■□□□□ 0.1
PCDHB16-201ENST00000609684 PALLDQ8WX93 1383 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 GNPTABQ3T906 1256 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 CEP57Q86XR8 500 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 SYNE4Q8N205 404 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 ANKRD13CQ8N6S4 541 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 DEPTORQ8TB45 409 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 AK8Q96MA6 479 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 CEP63Q96MT8 703 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 TEKT3Q9BXF9 490 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 LAMC1P11047 1609 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 SLC16A2P36021 539 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 LONRF2Q1L5Z9 754 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 GPATCH11Q8N954 259 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 PPFIA1Q13136 1202 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 CEP128Q6ZU80 1094 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 METTL14Q9HCE5 456 aaKnown RBP15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 BSDC1Q9NW68 430 aaPredicted RBP15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 SSX2IPQ9Y2D8 614 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 ABCC12Q96J65 1359 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 USP17L2Q6R6M4 530 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 GOLGA5Q8TBA6 731 aa15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 TRIM6Q9C030 488 aaPredicted RBP15.7■□□□□ 0.1
PCDHB16-201ENST00000609684 E7EVH7 732 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 MAP3K9P80192 1104 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 PABPC4Q13310 644 aaKnown RBP eCLIP15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 CSRNP1Q96S65 589 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 DBNDD1Q9H9R9 158 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 TRPC5Q9UL62 973 aaPredicted RBP15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 RABGAP1Q9Y3P9 1069 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 SRPRBQ9Y5M8 271 aaKnown RBP15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 MED14O60244 1454 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 CYP2E1P05181 493 aaPredicted RBP15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 AS3MTQ9HBK9 375 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 BCS1LQ9Y276 419 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 CLRN2A0PK11 232 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 TRIM37O94972 964 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 BRDTQ58F21 947 aaPredicted RBP15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 B4GALNT4Q76KP1 1039 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 TBC1D10CQ8IV04 446 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 KCNG1Q9UIX4 513 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 USP17L3A6NCW0 530 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 USP17L4A6NCW7 530 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 EEF1GP26641 437 aaKnown RBP15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 RBL2Q08999 1139 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 CLUL1Q15846 466 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 CCDC14Q49A88 953 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 USP17L1Q7RTZ2 530 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 P2RX5Q93086 422 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 COA7Q96BR5 231 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 DHTKD1Q96HY7 919 aaPredicted RBP15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 SAMSN1Q9NSI8 373 aaKnown RBP15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 CCPG1Q9ULG6 757 aa15.69■□□□□ 0.1
PCDHB16-201ENST00000609684 TCP1P17987 556 aaKnown RBP15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 BAG6P46379 1132 aa15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 GUCY2FP51841 1108 aa15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 TTC31Q49AM3 519 aaPredicted RBP15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 PPP1R21Q6ZMI0 780 aa15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 SORBS3O60504 671 aa15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 KRT71Q3SY84 523 aa15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 EPSTI1Q96J88 318 aa15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 QTRT2Q9H974 415 aaKnown RBP15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 LRRC41Q15345 812 aa15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 ZNF658Q5TYW1 1059 aaPredicted RBP15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 TMC4Q7Z404 712 aa15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 MCF2L2Q86YR7 1114 aa15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 TRIM7Q9C029 511 aa15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 H2AFZP0C0S5 128 aa15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 MTMR3Q13615 1198 aa15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 H2AFVQ71UI9 128 aa15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 INTS8Q75QN2 995 aaKnown RBP15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 KRT26Q7Z3Y9 468 aa15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 CCDC127Q96BQ5 260 aa15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 PAGR1Q9BTK6 254 aa15.68■□□□□ 0.1
PCDHB16-201ENST00000609684 TULP4Q9NRJ4 1543 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 E9PCH4 1651 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 A6NNZ2 444 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 GDF11O95390 407 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 PLEKHA8P1O95397 391 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 UBXN2AP68543 259 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 TUBB8Q3ZCM7 444 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 ENOX1Q8TC92 643 aaKnown RBP15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 SETD1BQ9UPS6 1966 aaKnown RBP15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 LIG4P49917 911 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 EXOC3L4Q17RC7 722 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 ODR4Q5SWX8 454 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 ARMCX5Q6P1M9 558 aa15.67■□□□□ 0.1
PCDHB16-201ENST00000609684 RAB17Q9H0T7 212 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms