RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 HDAC8Q9BY41 377 aa6.5□□□□□ -1.37
SMCHD1-213ENST00000609587 OR14I1A6ND48 311 aa6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 CCDC85CA6NKD9 419 aa6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 IRS4O14654 1257 aaPredicted RBP6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 GJB6O95452 261 aa6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 TEKQ02763 1124 aa6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 NCAPHQ15003 741 aa6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 ZXDCQ2QGD7 858 aaPredicted RBP6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 SPATS1Q496A3 300 aa6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 ADGRF1Q5T601 910 aa6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 TDRD10Q5VZ19 366 aaKnown RBP6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 KIAA1211LQ6NV74 962 aa6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 ZNF655Q8N720 491 aaPredicted RBP6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 ANKS4BQ8N8V4 417 aa6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 ZNF512BQ96KM6 892 aaPredicted RBP6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 SRPK1Q96SB4 655 aaKnown RBP6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 G6PC3Q9BUM1 346 aa6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 PRR13Q9NZ81 148 aa6.49□□□□□ -1.37
SMCHD1-213ENST00000609587 HRKO00198 91 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 SIGLEC6O43699 453 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 TP53P04637 393 aaPredicted RBP6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 SRSF3P84103 164 aaKnown RBP6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 SNW1Q13573 536 aaKnown RBP6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 AUHQ13825 339 aaKnown RBP6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 ANKRD39Q53RE8 183 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 TMC3Q7Z5M5 1100 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 NLRX1Q86UT6 975 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 PPFIBP1Q86W92 1011 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 CCDC144CPQ8IYA2 1237 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 LINC01599Q8WXQ3 324 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 KLHL6Q8WZ60 621 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 SMARCC1Q92922 1105 aaPredicted RBP6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 MRFAP1L1Q96HT8 127 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 DEPDC7Q96QD5 511 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 PRDM14Q9GZV8 571 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 MKRN2Q9H000 416 aaKnown RBP6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 PIF1Q9H611 641 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 CNTD2Q9H8S5 307 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 FAM86C1Q9NVL1 165 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 CDK11AQ9UQ88 783 aaPredicted RBP6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 ZNF281Q9Y2X9 895 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 MSRB2Q9Y3D2 182 aa6.48□□□□□ -1.37
SMCHD1-213ENST00000609587 ZC3H12DA2A288 527 aaKnown RBP6.47□□□□□ -1.37
SMCHD1-213ENST00000609587 C9IYK1 514 aa6.47□□□□□ -1.37
SMCHD1-213ENST00000609587 N4BP3O15049 544 aa6.47□□□□□ -1.37
SMCHD1-213ENST00000609587 DUSP4Q13115 394 aa6.47□□□□□ -1.37
SMCHD1-213ENST00000609587 RNF111Q6ZNA4 994 aa6.47□□□□□ -1.37
SMCHD1-213ENST00000609587 LRP10Q7Z4F1 713 aa6.47□□□□□ -1.37
SMCHD1-213ENST00000609587 SPPL2CQ8IUH8 684 aa6.47□□□□□ -1.37
SMCHD1-213ENST00000609587 SIRT2Q8IXJ6 389 aa6.47□□□□□ -1.37
SMCHD1-213ENST00000609587 C7orf61Q8IZ16 206 aa6.47□□□□□ -1.37
SMCHD1-213ENST00000609587 USHBP1Q8N6Y0 703 aa6.47□□□□□ -1.37
SMCHD1-213ENST00000609587 TCTN2Q96GX1 697 aa6.47□□□□□ -1.37
SMCHD1-213ENST00000609587 CCDC113Q9H0I3 377 aa6.47□□□□□ -1.37
SMCHD1-213ENST00000609587 LUC7LQ9NQ29 371 aaKnown RBP6.47□□□□□ -1.37
SMCHD1-213ENST00000609587 SNTG2Q9NY99 539 aa6.47□□□□□ -1.37
SMCHD1-213ENST00000609587 PCDHB12Q9Y5F1 795 aa6.47□□□□□ -1.37
SMCHD1-213ENST00000609587 SHOXO15266 292 aa6.46□□□□□ -1.38
SMCHD1-213ENST00000609587 PDPK1O15530 556 aa6.46□□□□□ -1.38
SMCHD1-213ENST00000609587 PRAMEF1O95521 474 aa6.46□□□□□ -1.38
SMCHD1-213ENST00000609587 VIPR1P32241 457 aa6.46□□□□□ -1.38
SMCHD1-213ENST00000609587 RASA3Q14644 834 aa6.46□□□□□ -1.38
SMCHD1-213ENST00000609587 AXDND1Q5T1B0 1012 aaPredicted RBP6.46□□□□□ -1.38
SMCHD1-213ENST00000609587 NOP9Q86U38 636 aaKnown RBP6.46□□□□□ -1.38
SMCHD1-213ENST00000609587 TMEFF1Q8IYR6 380 aa6.46□□□□□ -1.38
SMCHD1-213ENST00000609587 LINC00116Q8NCU8 138 aa6.46□□□□□ -1.38
SMCHD1-213ENST00000609587 BDH2Q9BUT1 245 aa6.46□□□□□ -1.38
SMCHD1-213ENST00000609587 FAM221BA6H8Z2 402 aa6.45□□□□□ -1.38
SMCHD1-213ENST00000609587 INSRRP14616 1297 aa6.45□□□□□ -1.38
SMCHD1-213ENST00000609587 RASGRF1Q13972 1273 aa6.45□□□□□ -1.38
SMCHD1-213ENST00000609587 PUM1Q14671 1186 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMCHD1-213ENST00000609587 HEATR6Q6AI08 1181 aaKnown RBP6.45□□□□□ -1.38
SMCHD1-213ENST00000609587 MRM1Q6IN84 353 aaKnown RBP6.45□□□□□ -1.38
SMCHD1-213ENST00000609587 EEPD1Q7L9B9 569 aa6.45□□□□□ -1.38
SMCHD1-213ENST00000609587 SYTL4Q96C24 671 aaPredicted RBP6.45□□□□□ -1.38
SMCHD1-213ENST00000609587 HAUS7Q99871 368 aa6.45□□□□□ -1.38
SMCHD1-213ENST00000609587 CHST7Q9NS84 486 aa6.45□□□□□ -1.38
SMCHD1-213ENST00000609587 SIRT5Q9NXA8 310 aa6.45□□□□□ -1.38
SMCHD1-213ENST00000609587 FBXL21Q9UKT6 434 aa6.45□□□□□ -1.38
SMCHD1-213ENST00000609587 LOC105371045A0A1W2PR82 267 aa6.44□□□□□ -1.38
SMCHD1-213ENST00000609587 SUSD5O60279 629 aa6.44□□□□□ -1.38
SMCHD1-213ENST00000609587 USP2O75604 605 aaPredicted RBP6.44□□□□□ -1.38
SMCHD1-213ENST00000609587 NAT2P11245 290 aa6.44□□□□□ -1.38
SMCHD1-213ENST00000609587 CDR1P51861 262 aa6.44□□□□□ -1.38
SMCHD1-213ENST00000609587 PCBP3P57721 371 aaKnown RBP6.44□□□□□ -1.38
SMCHD1-213ENST00000609587 IFRD2Q12894 506 aaPredicted RBP6.44□□□□□ -1.38
SMCHD1-213ENST00000609587 TCEAL1Q15170 157 aa6.44□□□□□ -1.38
SMCHD1-213ENST00000609587 DCAF15Q66K64 600 aa6.44□□□□□ -1.38
SMCHD1-213ENST00000609587 FRMD5Q7Z6J6 570 aa6.44□□□□□ -1.38
SMCHD1-213ENST00000609587 GFOD1Q9NXC2 390 aa6.44□□□□□ -1.38
SMCHD1-213ENST00000609587 TCFL5Q9UL49 500 aa6.44□□□□□ -1.38
SMCHD1-213ENST00000609587 EPHX1P07099 455 aa6.43□□□□□ -1.38
SMCHD1-213ENST00000609587 SDHBP21912 280 aa6.43□□□□□ -1.38
SMCHD1-213ENST00000609587 ZNF143P52747 638 aaPredicted RBP6.43□□□□□ -1.38
SMCHD1-213ENST00000609587 MTERF2Q49AM1 385 aa6.43□□□□□ -1.38
SMCHD1-213ENST00000609587 FAM129CQ86XR2 697 aa6.43□□□□□ -1.38
SMCHD1-213ENST00000609587 ST13P5Q8NFI4 369 aaPredicted RBP6.43□□□□□ -1.38
SMCHD1-213ENST00000609587 APBA2Q99767 749 aa6.43□□□□□ -1.38
SMCHD1-213ENST00000609587 SUSD2Q9UGT4 822 aa6.43□□□□□ -1.38
SMCHD1-213ENST00000609587 ANKRD34BA5PLL1 514 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms