RNA–Protein interactions for RNA: ENST00000608223.6

LINC00854-213, Long intergenic non-protein coding RNA 854, humanhuman

APPRIS ALT2 TSL 5

Gene LINC00854, Length 391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854-213ENST00000608223 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.74■□□□□ 0.27
LINC00854-213ENST00000608223 IGHDP01880 384 aa16.74■□□□□ 0.27
LINC00854-213ENST00000608223 SDSP20132 328 aa16.74■□□□□ 0.27
LINC00854-213ENST00000608223 CST5P28325 142 aaPredicted RBP16.74■□□□□ 0.27
LINC00854-213ENST00000608223 FAM109BQ6ICB4 259 aaPredicted RBP16.74■□□□□ 0.27
LINC00854-213ENST00000608223 NSMFQ6X4W1 530 aa16.74■□□□□ 0.27
LINC00854-213ENST00000608223 MFSD6Q6ZSS7 791 aa16.74■□□□□ 0.27
LINC00854-213ENST00000608223 ANKRD33Q7Z3H0 272 aa16.74■□□□□ 0.27
LINC00854-213ENST00000608223 CHD1LQ86WJ1 897 aa16.74■□□□□ 0.27
LINC00854-213ENST00000608223 TOX2Q96NM4 488 aa16.74■□□□□ 0.27
LINC00854-213ENST00000608223 UPF3AQ9H1J1 476 aaKnown RBP16.74■□□□□ 0.27
LINC00854-213ENST00000608223 GPCPD1Q9NPB8 672 aa16.74■□□□□ 0.27
LINC00854-213ENST00000608223 TCP11L1Q9NUJ3 509 aa16.74■□□□□ 0.27
LINC00854-213ENST00000608223 CYP39A1Q9NYL5 469 aa16.74■□□□□ 0.27
LINC00854-213ENST00000608223 ASTN1O14525 1302 aa16.73■□□□□ 0.27
LINC00854-213ENST00000608223 ICAM1P05362 532 aa16.73■□□□□ 0.27
LINC00854-213ENST00000608223 EPHB4P54760 987 aa16.73■□□□□ 0.27
LINC00854-213ENST00000608223 BEX3Q00994 111 aa16.73■□□□□ 0.27
LINC00854-213ENST00000608223 TNFAIP2Q03169 654 aa16.73■□□□□ 0.27
LINC00854-213ENST00000608223 AKNAD1Q5T1N1 836 aa16.73■□□□□ 0.27
LINC00854-213ENST00000608223 ZNF697Q5TEC3 545 aa16.73■□□□□ 0.27
LINC00854-213ENST00000608223 SYDE2Q5VT97 1194 aa16.73■□□□□ 0.27
LINC00854-213ENST00000608223 EEPD1Q7L9B9 569 aa16.73■□□□□ 0.27
LINC00854-213ENST00000608223 PLEKHM2Q8IWE5 1019 aa16.73■□□□□ 0.27
LINC00854-213ENST00000608223 EXOC6Q8TAG9 804 aa16.73■□□□□ 0.27
LINC00854-213ENST00000608223 PURBQ96QR8 312 aaKnown RBP16.73■□□□□ 0.27
LINC00854-213ENST00000608223 RANBP17Q9H2T7 1088 aaKnown RBP16.73■□□□□ 0.27
LINC00854-213ENST00000608223 ELP1O95163 1332 aa16.72■□□□□ 0.27
LINC00854-213ENST00000608223 ZMYM6O95789 1325 aa16.72■□□□□ 0.27
LINC00854-213ENST00000608223 CTAGE5O15320 804 aa16.72■□□□□ 0.27
LINC00854-213ENST00000608223 MFAP1P55081 439 aaKnown RBP16.72■□□□□ 0.27
LINC00854-213ENST00000608223 FPGSQ05932 587 aa16.72■□□□□ 0.27
LINC00854-213ENST00000608223 BTNL9Q6UXG8 535 aa16.72■□□□□ 0.27
LINC00854-213ENST00000608223 TBC1D10CQ8IV04 446 aa16.72■□□□□ 0.27
LINC00854-213ENST00000608223 GUCD1Q96NT3 240 aa16.72■□□□□ 0.27
LINC00854-213ENST00000608223 PDGFCQ9NRA1 345 aa16.72■□□□□ 0.27
LINC00854-213ENST00000608223 LAMA4Q16363 1823 aa16.72■□□□□ 0.27
LINC00854-213ENST00000608223 MYH6P13533 1939 aa16.71■□□□□ 0.27
LINC00854-213ENST00000608223 A0A0U1RQG5 324 aaPredicted RBP16.71■□□□□ 0.27
LINC00854-213ENST00000608223 PDHBP11177 359 aa16.71■□□□□ 0.27
LINC00854-213ENST00000608223 PTGS1P23219 599 aa16.71■□□□□ 0.27
LINC00854-213ENST00000608223 CDK7P50613 346 aa16.71■□□□□ 0.27
LINC00854-213ENST00000608223 NUCB1Q02818 461 aa16.71■□□□□ 0.27
LINC00854-213ENST00000608223 BAATQ14032 418 aaPredicted RBP16.71■□□□□ 0.27
LINC00854-213ENST00000608223 CWC27Q6UX04 472 aaKnown RBP16.71■□□□□ 0.27
LINC00854-213ENST00000608223 FBXO16Q8IX29 292 aaPredicted RBP16.71■□□□□ 0.27
LINC00854-213ENST00000608223 RNPC3Q96LT9 517 aaKnown RBP16.71■□□□□ 0.27
LINC00854-213ENST00000608223 ZKSCAN3Q9BRR0 538 aa16.71■□□□□ 0.27
LINC00854-213ENST00000608223 GNEQ9Y223 722 aaKnown RBP16.71■□□□□ 0.27
LINC00854-213ENST00000608223 MROH7Q68CQ1 1323 aa16.7■□□□□ 0.26
LINC00854-213ENST00000608223 ARVCFO00192 962 aa16.7■□□□□ 0.26
LINC00854-213ENST00000608223 NFIBO00712 420 aa16.7■□□□□ 0.26
LINC00854-213ENST00000608223 DYNC1LI2O43237 492 aaPredicted RBP16.7■□□□□ 0.26
LINC00854-213ENST00000608223 TIMP1P01033 207 aa16.7■□□□□ 0.26
LINC00854-213ENST00000608223 PCP11498 1178 aaKnown RBP16.7■□□□□ 0.26
LINC00854-213ENST00000608223 SMPD1P17405 629 aa16.7■□□□□ 0.26
LINC00854-213ENST00000608223 TAPT1Q6NXT6 567 aa16.7■□□□□ 0.26
LINC00854-213ENST00000608223 CXCL17Q6UXB2 119 aa16.7■□□□□ 0.26
LINC00854-213ENST00000608223 TLK2Q86UE8 772 aa16.7■□□□□ 0.26
LINC00854-213ENST00000608223 TTC14Q96N46 770 aa16.7■□□□□ 0.26
LINC00854-213ENST00000608223 AP5M1Q9H0R1 490 aa16.7■□□□□ 0.26
LINC00854-213ENST00000608223 OSBPL3Q9H4L5 887 aa16.7■□□□□ 0.26
LINC00854-213ENST00000608223 RNF41Q9H4P4 317 aaPredicted RBP16.7■□□□□ 0.26
LINC00854-213ENST00000608223 NEDD4P46934 1319 aa16.7■□□□□ 0.26
LINC00854-213ENST00000608223 MYO9BQ13459 2157 aa16.7■□□□□ 0.26
LINC00854-213ENST00000608223 PTPDC1A2A3K4 754 aa16.69■□□□□ 0.26
LINC00854-213ENST00000608223 DLL1O00548 723 aa16.69■□□□□ 0.26
LINC00854-213ENST00000608223 ZNF213O14771 459 aa16.69■□□□□ 0.26
LINC00854-213ENST00000608223 NKX3-2P78367 333 aa16.69■□□□□ 0.26
LINC00854-213ENST00000608223 SMAD3P84022 425 aaKnown RBP16.69■□□□□ 0.26
LINC00854-213ENST00000608223 ZNF543Q08ER8 600 aa16.69■□□□□ 0.26
LINC00854-213ENST00000608223 FSCN1Q16658 493 aaKnown RBP16.69■□□□□ 0.26
LINC00854-213ENST00000608223 TMEM63BQ5T3F8 832 aa16.69■□□□□ 0.26
LINC00854-213ENST00000608223 IQSEC1Q6DN90 963 aa16.69■□□□□ 0.26
LINC00854-213ENST00000608223 KIAA1211Q6ZU35 1233 aa16.69■□□□□ 0.26
LINC00854-213ENST00000608223 ESR2Q92731 530 aa16.69■□□□□ 0.26
LINC00854-213ENST00000608223 DIAPH3Q9NSV4 1193 aa16.69■□□□□ 0.26
LINC00854-213ENST00000608223 TBX21Q9UL17 535 aa16.69■□□□□ 0.26
LINC00854-213ENST00000608223 TLR3O15455 904 aaKnown RBP16.68■□□□□ 0.26
LINC00854-213ENST00000608223 CALML3P27482 149 aa16.68■□□□□ 0.26
LINC00854-213ENST00000608223 ALDH5A1P51649 535 aaPredicted RBP16.68■□□□□ 0.26
LINC00854-213ENST00000608223 FAM126BQ8IXS8 530 aa16.68■□□□□ 0.26
LINC00854-213ENST00000608223 PPP1R12CQ9BZL4 782 aa16.68■□□□□ 0.26
LINC00854-213ENST00000608223 SEMA6BQ9H3T3 888 aa16.68■□□□□ 0.26
LINC00854-213ENST00000608223 VTA1Q9NP79 307 aa16.68■□□□□ 0.26
LINC00854-213ENST00000608223 ADD3Q9UEY8 706 aaKnown RBP16.68■□□□□ 0.26
LINC00854-213ENST00000608223 UNC80Q8N2C7 3258 aa16.67■□□□□ 0.26
LINC00854-213ENST00000608223 GOLGA8HP0CJ92 632 aa16.67■□□□□ 0.26
LINC00854-213ENST00000608223 MFSD5Q6N075 450 aa16.67■□□□□ 0.26
LINC00854-213ENST00000608223 MORC4Q8TE76 937 aa16.67■□□□□ 0.26
LINC00854-213ENST00000608223 CLEC4DQ8WXI8 215 aa16.67■□□□□ 0.26
LINC00854-213ENST00000608223 CPVLQ9H3G5 476 aa16.67■□□□□ 0.26
LINC00854-213ENST00000608223 CUL9Q8IWT3 2517 aa16.67■□□□□ 0.26
LINC00854-213ENST00000608223 ZEB2O60315 1214 aa16.66■□□□□ 0.26
LINC00854-213ENST00000608223 KDM4AO75164 1064 aa16.66■□□□□ 0.26
LINC00854-213ENST00000608223 CABYRO75952 493 aa16.66■□□□□ 0.26
LINC00854-213ENST00000608223 SNHG28P0DPA3 235 aa16.66■□□□□ 0.26
LINC00854-213ENST00000608223 ITGA7Q13683 1181 aa16.66■□□□□ 0.26
LINC00854-213ENST00000608223 SLC30A10Q6XR72 485 aa16.66■□□□□ 0.26
LINC00854-213ENST00000608223 RNF207Q6ZRF8 634 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms