RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 TTLL1O95922 423 aa16.08■□□□□ 0.16
CTSA-218ENST00000607814 CSF2RAP15509 400 aa16.08■□□□□ 0.16
CTSA-218ENST00000607814 PBX2P40425 430 aa16.08■□□□□ 0.16
CTSA-218ENST00000607814 ZNF467Q7Z7K2 595 aaPredicted RBP16.08■□□□□ 0.16
CTSA-218ENST00000607814 REPS2Q8NFH8 660 aa16.08■□□□□ 0.16
CTSA-218ENST00000607814 LENG1Q96BZ8 264 aaPredicted RBP16.08■□□□□ 0.16
CTSA-218ENST00000607814 C1QTNF1Q9BXJ1 281 aa16.08■□□□□ 0.16
CTSA-218ENST00000607814 TEX13BQ9BXU2 312 aa16.08■□□□□ 0.16
CTSA-218ENST00000607814 ARIH1Q9Y4X5 557 aaPredicted RBP16.08■□□□□ 0.16
CTSA-218ENST00000607814 REV3LO60673 3130 aa16.08■□□□□ 0.16
CTSA-218ENST00000607814 PIEZO1Q92508 2521 aa16.08■□□□□ 0.16
CTSA-218ENST00000607814 A0A0U1RQG5 324 aaPredicted RBP16.07■□□□□ 0.16
CTSA-218ENST00000607814 ARVCFO00192 962 aa16.07■□□□□ 0.16
CTSA-218ENST00000607814 TLR3O15455 904 aaKnown RBP16.07■□□□□ 0.16
CTSA-218ENST00000607814 MCCP23508 829 aa16.07■□□□□ 0.16
CTSA-218ENST00000607814 ADGRE1Q14246 886 aa16.07■□□□□ 0.16
CTSA-218ENST00000607814 SLFN13Q68D06 897 aa16.07■□□□□ 0.16
CTSA-218ENST00000607814 ZNF365Q70YC5 407 aa16.07■□□□□ 0.16
CTSA-218ENST00000607814 HERVK_113Q902F9 699 aa16.07■□□□□ 0.16
CTSA-218ENST00000607814 MKL1Q969V6 931 aa16.07■□□□□ 0.16
CTSA-218ENST00000607814 ZKSCAN3Q9BRR0 538 aa16.07■□□□□ 0.16
CTSA-218ENST00000607814 CXXC1Q9P0U4 656 aaPredicted RBP16.07■□□□□ 0.16
CTSA-218ENST00000607814 DNAJC25-GNG10A0A024R161 153 aa16.06■□□□□ 0.16
CTSA-218ENST00000607814 GRXCR1A8MXD5 290 aa16.06■□□□□ 0.16
CTSA-218ENST00000607814 HIP1O00291 1037 aa16.06■□□□□ 0.16
CTSA-218ENST00000607814 ZNF213O14771 459 aa16.06■□□□□ 0.16
CTSA-218ENST00000607814 SNAI1O95863 264 aaPredicted RBP16.06■□□□□ 0.16
CTSA-218ENST00000607814 ASGR1P07306 291 aa16.06■□□□□ 0.16
CTSA-218ENST00000607814 C6orf222P0C671 652 aaPredicted RBP16.06■□□□□ 0.16
CTSA-218ENST00000607814 CHMLP26374 656 aa16.06■□□□□ 0.16
CTSA-218ENST00000607814 GJA9P57773 515 aa16.06■□□□□ 0.16
CTSA-218ENST00000607814 SNAP25P60880 206 aa16.06■□□□□ 0.16
CTSA-218ENST00000607814 FAM126BQ8IXS8 530 aa16.06■□□□□ 0.16
CTSA-218ENST00000607814 KIFC2Q96AC6 838 aa16.06■□□□□ 0.16
CTSA-218ENST00000607814 DDX11Q96FC9 970 aa16.06■□□□□ 0.16
CTSA-218ENST00000607814 UPF3AQ9H1J1 476 aaKnown RBP16.06■□□□□ 0.16
CTSA-218ENST00000607814 SLC28A3Q9HAS3 691 aa16.06■□□□□ 0.16
CTSA-218ENST00000607814 IL23AQ9NPF7 189 aa16.06■□□□□ 0.16
CTSA-218ENST00000607814 RAPGEFL1Q9UHV5 662 aa16.06■□□□□ 0.16
CTSA-218ENST00000607814 ZHX1Q9UKY1 873 aaPredicted RBP16.06■□□□□ 0.16
CTSA-218ENST00000607814 MYH4Q9Y623 1939 aa16.06■□□□□ 0.16
CTSA-218ENST00000607814 NEDD4P46934 1319 aa16.05■□□□□ 0.16
CTSA-218ENST00000607814 ORC4O43929 436 aa16.05■□□□□ 0.16
CTSA-218ENST00000607814 FGRP09769 529 aa16.05■□□□□ 0.16
CTSA-218ENST00000607814 MFAP1P55081 439 aaKnown RBP16.05■□□□□ 0.16
CTSA-218ENST00000607814 NKX3-2P78367 333 aa16.05■□□□□ 0.16
CTSA-218ENST00000607814 PTH1RQ03431 593 aa16.05■□□□□ 0.16
CTSA-218ENST00000607814 AAK1Q2M2I8 961 aa16.05■□□□□ 0.16
CTSA-218ENST00000607814 MFSD6Q6ZSS7 791 aa16.05■□□□□ 0.16
CTSA-218ENST00000607814 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.05■□□□□ 0.16
CTSA-218ENST00000607814 TICAM2Q86XR7 235 aa16.05■□□□□ 0.16
CTSA-218ENST00000607814 CPXCR1Q8N123 301 aa16.05■□□□□ 0.16
CTSA-218ENST00000607814 SEZ6LQ9BYH1 1024 aa16.05■□□□□ 0.16
CTSA-218ENST00000607814 ABHD16BQ9H3Z7 469 aa16.05■□□□□ 0.16
CTSA-218ENST00000607814 PLIN4Q96Q06 1357 aa16.04■□□□□ 0.16
CTSA-218ENST00000607814 TMEM232C9JQI7 657 aa16.04■□□□□ 0.16
CTSA-218ENST00000607814 ATP2A1O14983 1001 aa16.04■□□□□ 0.16
CTSA-218ENST00000607814 BMP3P12645 472 aa16.04■□□□□ 0.16
CTSA-218ENST00000607814 IGFBP4P22692 258 aa16.04■□□□□ 0.16
CTSA-218ENST00000607814 ACVR2BQ13705 512 aa16.04■□□□□ 0.16
CTSA-218ENST00000607814 GNASQ5JWF2 1037 aa16.04■□□□□ 0.16
CTSA-218ENST00000607814 KCTD1Q719H9 257 aa16.04■□□□□ 0.16
CTSA-218ENST00000607814 STAG1Q8WVM7 1258 aa16.04■□□□□ 0.16
CTSA-218ENST00000607814 VTI1AQ96AJ9 217 aa16.04■□□□□ 0.16
CTSA-218ENST00000607814 SLF1Q9BQI6 1058 aa16.04■□□□□ 0.16
CTSA-218ENST00000607814 MYADML2A6NDP7 307 aa16.03■□□□□ 0.16
CTSA-218ENST00000607814 CD4P01730 458 aa16.03■□□□□ 0.16
CTSA-218ENST00000607814 FGBP02675 491 aa16.03■□□□□ 0.16
CTSA-218ENST00000607814 ACRP10323 421 aa16.03■□□□□ 0.16
CTSA-218ENST00000607814 HOXD11P31277 338 aaPredicted RBP16.03■□□□□ 0.16
CTSA-218ENST00000607814 SLC1A4P43007 532 aa16.03■□□□□ 0.16
CTSA-218ENST00000607814 CCDC85BQ15834 202 aaPredicted RBP16.03■□□□□ 0.16
CTSA-218ENST00000607814 SNRNP48Q6IEG0 339 aaKnown RBP16.03■□□□□ 0.16
CTSA-218ENST00000607814 GMCL1P1Q8NEA9 526 aa16.03■□□□□ 0.16
CTSA-218ENST00000607814 TMEM47Q9BQJ4 181 aa16.03■□□□□ 0.16
CTSA-218ENST00000607814 DSCC1Q9BVC3 393 aa16.03■□□□□ 0.16
CTSA-218ENST00000607814 PPP1R12CQ9BZL4 782 aa16.03■□□□□ 0.16
CTSA-218ENST00000607814 RAVER2Q9HCJ3 691 aaKnown RBP16.03■□□□□ 0.16
CTSA-218ENST00000607814 RIPK3Q9Y572 518 aa16.03■□□□□ 0.16
CTSA-218ENST00000607814 ZMYM6O95789 1325 aa16.02■□□□□ 0.16
CTSA-218ENST00000607814 FRMPD2Q68DX3 1309 aaPredicted RBP16.02■□□□□ 0.16
CTSA-218ENST00000607814 KDM4AO75164 1064 aa16.02■□□□□ 0.16
CTSA-218ENST00000607814 CABYRO75952 493 aa16.02■□□□□ 0.16
CTSA-218ENST00000607814 BMP1P13497 986 aa16.02■□□□□ 0.16
CTSA-218ENST00000607814 IKQ13123 557 aaPredicted RBP16.02■□□□□ 0.16
CTSA-218ENST00000607814 CCDC144BQ3MJ40 725 aa16.02■□□□□ 0.16
CTSA-218ENST00000607814 TTBK2Q6IQ55 1244 aa16.02■□□□□ 0.16
CTSA-218ENST00000607814 CENPQQ7L2Z9 268 aaPredicted RBP16.02■□□□□ 0.16
CTSA-218ENST00000607814 PRPF38AQ8NAV1 312 aaKnown RBP16.02■□□□□ 0.16
CTSA-218ENST00000607814 SLC43A3Q8NBI5 491 aa16.02■□□□□ 0.16
CTSA-218ENST00000607814 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.02■□□□□ 0.16
CTSA-218ENST00000607814 FBXO40Q9UH90 709 aa16.02■□□□□ 0.16
CTSA-218ENST00000607814 B4E1Z4 1266 aa16.01■□□□□ 0.15
CTSA-218ENST00000607814 SLC16A2P36021 539 aa16.01■□□□□ 0.15
CTSA-218ENST00000607814 CCDC136Q96JN2 1154 aa16.01■□□□□ 0.15
CTSA-218ENST00000607814 NKX2-4Q9H2Z4 354 aa16.01■□□□□ 0.15
CTSA-218ENST00000607814 HIPK3Q9H422 1215 aa16.01■□□□□ 0.15
CTSA-218ENST00000607814 GPCPD1Q9NPB8 672 aa16.01■□□□□ 0.15
CTSA-218ENST00000607814 FEM1BQ9UK73 627 aa16.01■□□□□ 0.15
CTSA-218ENST00000607814 TAF6LQ9Y6J9 622 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms