RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 GMCL1Q96IK5 515 aa12.03□□□□□ -0.48
LINC01954-201ENST00000607419 C12orf42Q96LP6 360 aa12.03□□□□□ -0.48
LINC01954-201ENST00000607419 LARP6Q9BRS8 491 aaKnown RBP12.03□□□□□ -0.48
LINC01954-201ENST00000607419 SLKQ9H2G2 1235 aaPredicted RBP12.03□□□□□ -0.48
LINC01954-201ENST00000607419 SH2B1Q9NRF2 756 aaPredicted RBP12.03□□□□□ -0.48
LINC01954-201ENST00000607419 TMOD4Q9NZQ9 345 aa12.03□□□□□ -0.48
LINC01954-201ENST00000607419 NID2Q14112 1375 aa12.03□□□□□ -0.48
LINC01954-201ENST00000607419 MYO9BQ13459 2157 aa12.02□□□□□ -0.48
LINC01954-201ENST00000607419 CCDC196A0A1B0GTZ2 297 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 GOLGA8BA8MQT2 603 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 RAD21O60216 631 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 PFKFB2O60825 505 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 CNMDO75829 334 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 NDUFB10O96000 172 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 PDHBP11177 359 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 HOXA7P31268 230 aaPredicted RBP12.02□□□□□ -0.49
LINC01954-201ENST00000607419 KIF5BP33176 963 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 METAP2P50579 478 aaKnown RBP eCLIP12.02□□□□□ -0.49
LINC01954-201ENST00000607419 EPHB4P54760 987 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 HERVK_113P62684 666 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 GRM4Q14833 912 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 GRIN2CQ14957 1233 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 ZYXQ15942 572 aaKnown RBP12.02□□□□□ -0.49
LINC01954-201ENST00000607419 GPR142Q7Z601 462 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 MICU3Q86XE3 530 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 HSCBQ8IWL3 235 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 FANCBQ8NB91 859 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 CTCFLQ8NI51 663 aaPredicted RBP12.02□□□□□ -0.49
LINC01954-201ENST00000607419 LBHD1Q9BQE6 289 aaPredicted RBP12.02□□□□□ -0.49
LINC01954-201ENST00000607419 MYL10Q9BUA6 226 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 EMILIN3Q9NT22 766 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 MTMR7Q9Y216 660 aa12.02□□□□□ -0.49
LINC01954-201ENST00000607419 RBM19Q9Y4C8 960 aaKnown RBP12.02□□□□□ -0.49
LINC01954-201ENST00000607419 TRIM43BA6NCK2 446 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 GOLGA8AA7E2F4 631 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 K7ELQ4 463 aaPredicted RBP12.01□□□□□ -0.49
LINC01954-201ENST00000607419 TNFRSF10AO00220 468 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 WDR46O15213 610 aaKnown RBP12.01□□□□□ -0.49
LINC01954-201ENST00000607419 DHX16O60231 1041 aaKnown RBP12.01□□□□□ -0.49
LINC01954-201ENST00000607419 IGHA2P01877 340 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 PARP1P09874 1014 aaKnown RBP12.01□□□□□ -0.49
LINC01954-201ENST00000607419 BMP3P12645 472 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 ANP32AP39687 249 aaKnown RBP12.01□□□□□ -0.49
LINC01954-201ENST00000607419 SLC1A4P43007 532 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 GNAQP50148 359 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 ERVK-9P63128 1117 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 ERVK-24P63145 666 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 ZNF543Q08ER8 600 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 STK3Q13188 491 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 BECN1Q14457 450 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 ME3Q16798 604 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 RTN1Q16799 776 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 ASPRV1Q53RT3 343 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 GPATCH4Q5T3I0 446 aaKnown RBP12.01□□□□□ -0.49
LINC01954-201ENST00000607419 GJC2Q5T442 439 aaPredicted RBP12.01□□□□□ -0.49
LINC01954-201ENST00000607419 GPRC5AQ8NFJ5 357 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 NPLOC4Q8TAT6 608 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 TRIM43Q96BQ3 446 aaPredicted RBP12.01□□□□□ -0.49
LINC01954-201ENST00000607419 TMX3Q96JJ7 454 aa12.01□□□□□ -0.49
LINC01954-201ENST00000607419 RBM28Q9NW13 759 aaKnown RBP12.01□□□□□ -0.49
LINC01954-201ENST00000607419 PALM3A6NDB9 673 aaPredicted RBP12□□□□□ -0.49
LINC01954-201ENST00000607419 LARGE1O95461 756 aa12□□□□□ -0.49
LINC01954-201ENST00000607419 FOSL2P15408 326 aa12□□□□□ -0.49
LINC01954-201ENST00000607419 RXRAP19793 462 aa12□□□□□ -0.49
LINC01954-201ENST00000607419 CCT2P78371 535 aaKnown RBP12□□□□□ -0.49
LINC01954-201ENST00000607419 SMAD3P84022 425 aaKnown RBP12□□□□□ -0.49
LINC01954-201ENST00000607419 CCDC96Q2M329 555 aa12□□□□□ -0.49
LINC01954-201ENST00000607419 KIAA1755Q5JYT7 1200 aa12□□□□□ -0.49
LINC01954-201ENST00000607419 ANO1Q5XXA6 986 aa12□□□□□ -0.49
LINC01954-201ENST00000607419 SLC39A5Q6ZMH5 540 aa12□□□□□ -0.49
LINC01954-201ENST00000607419 RAB11FIP4Q86YS3 637 aa12□□□□□ -0.49
LINC01954-201ENST00000607419 CCDC144CPQ8IYA2 1237 aa12□□□□□ -0.49
LINC01954-201ENST00000607419 SPICE1Q8N0Z3 855 aa12□□□□□ -0.49
LINC01954-201ENST00000607419 GTF3C6Q969F1 213 aa12□□□□□ -0.49
LINC01954-201ENST00000607419 LZTS2Q9BRK4 669 aa12□□□□□ -0.49
LINC01954-201ENST00000607419 MAD2L2Q9UI95 211 aa12□□□□□ -0.49
LINC01954-201ENST00000607419 ATP11BQ9Y2G3 1177 aa12□□□□□ -0.49
LINC01954-201ENST00000607419 TTC28Q96AY4 2481 aa12□□□□□ -0.49
LINC01954-201ENST00000607419 CHD9Q3L8U1 2897 aa12□□□□□ -0.49
LINC01954-201ENST00000607419 SPDYE4A6NLX3 237 aa11.99□□□□□ -0.49
LINC01954-201ENST00000607419 KLRF2D3W0D1 207 aa11.99□□□□□ -0.49
LINC01954-201ENST00000607419 PLA2G6O60733 806 aa11.99□□□□□ -0.49
LINC01954-201ENST00000607419 VCAM1P19320 739 aa11.99□□□□□ -0.49
LINC01954-201ENST00000607419 SMARCA1P28370 1054 aa11.99□□□□□ -0.49
LINC01954-201ENST00000607419 CYP2C19P33261 490 aa11.99□□□□□ -0.49
LINC01954-201ENST00000607419 SCRN1Q12765 414 aa11.99□□□□□ -0.49
LINC01954-201ENST00000607419 PABPC4Q13310 644 aaKnown RBP eCLIP11.99□□□□□ -0.49
LINC01954-201ENST00000607419 FAM83BQ5T0W9 1011 aa11.99□□□□□ -0.49
LINC01954-201ENST00000607419 CPLX2Q6PUV4 134 aaKnown RBP11.99□□□□□ -0.49
LINC01954-201ENST00000607419 KCTD1Q719H9 257 aa11.99□□□□□ -0.49
LINC01954-201ENST00000607419 PLEKHH3Q7Z736 793 aa11.99□□□□□ -0.49
LINC01954-201ENST00000607419 NECAB1Q8N987 351 aa11.99□□□□□ -0.49
LINC01954-201ENST00000607419 CHURC1Q8WUH1 139 aa11.99□□□□□ -0.49
LINC01954-201ENST00000607419 SYMPKQ92797 1274 aaKnown RBP11.99□□□□□ -0.49
LINC01954-201ENST00000607419 NUP88Q99567 741 aaPredicted RBP11.99□□□□□ -0.49
LINC01954-201ENST00000607419 PAGR1Q9BTK6 254 aa11.99□□□□□ -0.49
LINC01954-201ENST00000607419 FAM217BQ9NTX9 383 aaPredicted RBP11.99□□□□□ -0.49
LINC01954-201ENST00000607419 FEM1BQ9UK73 627 aa11.99□□□□□ -0.49
LINC01954-201ENST00000607419 ISY1Q9ULR0 285 aaKnown RBP11.99□□□□□ -0.49
LINC01954-201ENST00000607419 A0A0G2JMZ2 1700 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms