RNA–Protein interactions for RNA: ENST00000606690.5

NECAB3-219, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-219ENST00000606690 CABYRO75952 493 aa16.92■□□□□ 0.3
NECAB3-219ENST00000606690 HSPD1P10809 573 aaKnown RBP16.92■□□□□ 0.3
NECAB3-219ENST00000606690 PCP11498 1178 aaKnown RBP16.92■□□□□ 0.3
NECAB3-219ENST00000606690 NOVP48745 357 aa16.92■□□□□ 0.3
NECAB3-219ENST00000606690 PPIGQ13427 754 aaKnown RBP eCLIP16.92■□□□□ 0.31e-9■■■■□ 20.5
NECAB3-219ENST00000606690 SYDE2Q5VT97 1194 aa16.92■□□□□ 0.3
NECAB3-219ENST00000606690 TMEM199Q8N511 208 aa16.92■□□□□ 0.3
NECAB3-219ENST00000606690 LNPKQ9C0E8 428 aa16.92■□□□□ 0.3
NECAB3-219ENST00000606690 KATNBL1Q9H079 304 aa16.92■□□□□ 0.3
NECAB3-219ENST00000606690 RANBP17Q9H2T7 1088 aaKnown RBP16.92■□□□□ 0.3
NECAB3-219ENST00000606690 RWDD1Q9H446 243 aaPredicted RBP16.92■□□□□ 0.3
NECAB3-219ENST00000606690 RNF41Q9H4P4 317 aaPredicted RBP16.92■□□□□ 0.3
NECAB3-219ENST00000606690 TCP11L1Q9NUJ3 509 aa16.92■□□□□ 0.3
NECAB3-219ENST00000606690 ADD3Q9UEY8 706 aaKnown RBP16.92■□□□□ 0.3
NECAB3-219ENST00000606690 TBX21Q9UL17 535 aa16.92■□□□□ 0.3
NECAB3-219ENST00000606690 CCDC171Q6TFL3 1326 aa16.92■□□□□ 0.3
NECAB3-219ENST00000606690 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.91■□□□□ 0.3
NECAB3-219ENST00000606690 CDK7P50613 346 aa16.91■□□□□ 0.3
NECAB3-219ENST00000606690 IRX5P78411 483 aaPredicted RBP16.91■□□□□ 0.3
NECAB3-219ENST00000606690 NMIQ13287 307 aaPredicted RBP16.91■□□□□ 0.3
NECAB3-219ENST00000606690 MUM1L1Q5H9M0 696 aa16.91■□□□□ 0.3
NECAB3-219ENST00000606690 IQSEC1Q6DN90 963 aa16.91■□□□□ 0.3
NECAB3-219ENST00000606690 MFSD5Q6N075 450 aa16.91■□□□□ 0.3
NECAB3-219ENST00000606690 MFSD6Q6ZSS7 791 aa16.91■□□□□ 0.3
NECAB3-219ENST00000606690 RASGRP2Q7LDG7 609 aa16.91■□□□□ 0.3
NECAB3-219ENST00000606690 CDX2Q99626 313 aaPredicted RBP16.91■□□□□ 0.3
NECAB3-219ENST00000606690 TMEM47Q9BQJ4 181 aa16.91■□□□□ 0.3
NECAB3-219ENST00000606690 SEMA6BQ9H3T3 888 aa16.91■□□□□ 0.3
NECAB3-219ENST00000606690 VTA1Q9NP79 307 aa16.91■□□□□ 0.3
NECAB3-219ENST00000606690 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.9■□□□□ 0.3
NECAB3-219ENST00000606690 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.9■□□□□ 0.3
NECAB3-219ENST00000606690 SLC16A2P36021 539 aa16.9■□□□□ 0.3
NECAB3-219ENST00000606690 EPHB4P54760 987 aa16.9■□□□□ 0.3
NECAB3-219ENST00000606690 HAND2P61296 217 aa16.9■□□□□ 0.3
NECAB3-219ENST00000606690 NKX3-2P78367 333 aa16.9■□□□□ 0.3
NECAB3-219ENST00000606690 BEX3Q00994 111 aa16.9■□□□□ 0.3
NECAB3-219ENST00000606690 FSCN1Q16658 493 aaKnown RBP16.9■□□□□ 0.3
NECAB3-219ENST00000606690 BTNL9Q6UXG8 535 aa16.9■□□□□ 0.3
NECAB3-219ENST00000606690 EEPD1Q7L9B9 569 aa16.9■□□□□ 0.3
NECAB3-219ENST00000606690 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.9■□□□□ 0.3
NECAB3-219ENST00000606690 FBXO16Q8IX29 292 aaPredicted RBP16.9■□□□□ 0.3
NECAB3-219ENST00000606690 TTC14Q96N46 770 aa16.9■□□□□ 0.3
NECAB3-219ENST00000606690 MPHOSPH6Q99547 160 aaKnown RBP16.9■□□□□ 0.3
NECAB3-219ENST00000606690 SEZ6LQ9BYH1 1024 aa16.9■□□□□ 0.3
NECAB3-219ENST00000606690 GPCPD1Q9NPB8 672 aa16.9■□□□□ 0.3
NECAB3-219ENST00000606690 Q9Y3F1 56 aa16.9■□□□□ 0.3
NECAB3-219ENST00000606690 FRMPD2Q68DX3 1309 aaPredicted RBP16.9■□□□□ 0.3
NECAB3-219ENST00000606690 LOC102724159A0A0B4J2E5 919 aa16.89■□□□□ 0.29
NECAB3-219ENST00000606690 PTPDC1A2A3K4 754 aa16.89■□□□□ 0.29
NECAB3-219ENST00000606690 DYNC1LI2O43237 492 aaPredicted RBP16.89■□□□□ 0.29
NECAB3-219ENST00000606690 PWP2Q15269 919 aaKnown RBP16.89■□□□□ 0.29
NECAB3-219ENST00000606690 AKNAD1Q5T1N1 836 aa16.89■□□□□ 0.29
NECAB3-219ENST00000606690 TTBK2Q6IQ55 1244 aa16.89■□□□□ 0.29
NECAB3-219ENST00000606690 B4GALNT3Q6L9W6 998 aa16.89■□□□□ 0.29
NECAB3-219ENST00000606690 CXCL17Q6UXB2 119 aa16.89■□□□□ 0.29
NECAB3-219ENST00000606690 KIAA1211Q6ZU35 1233 aa16.89■□□□□ 0.29
NECAB3-219ENST00000606690 ZNF589Q86UQ0 364 aaPredicted RBP16.89■□□□□ 0.29
NECAB3-219ENST00000606690 FAM126BQ8IXS8 530 aa16.89■□□□□ 0.29
NECAB3-219ENST00000606690 ESR2Q92731 530 aa16.89■□□□□ 0.29
NECAB3-219ENST00000606690 PPP1R12CQ9BZL4 782 aa16.89■□□□□ 0.29
NECAB3-219ENST00000606690 GNEQ9Y223 722 aaKnown RBP16.89■□□□□ 0.29
NECAB3-219ENST00000606690 SMCHD1A6NHR9 2005 aa16.89■□□□□ 0.29
NECAB3-219ENST00000606690 CTAGE5O15320 804 aa16.88■□□□□ 0.29
NECAB3-219ENST00000606690 PDHBP11177 359 aa16.88■□□□□ 0.29
NECAB3-219ENST00000606690 FOSL2P15408 326 aa16.88■□□□□ 0.29
NECAB3-219ENST00000606690 SMPD1P17405 629 aa16.88■□□□□ 0.29
NECAB3-219ENST00000606690 NT5C2P49902 561 aa16.88■□□□□ 0.29
NECAB3-219ENST00000606690 BAATQ14032 418 aaPredicted RBP16.88■□□□□ 0.29
NECAB3-219ENST00000606690 PSRC1Q6PGN9 363 aaPredicted RBP16.88■□□□□ 0.29
NECAB3-219ENST00000606690 MTIF3Q9H2K0 278 aaKnown RBP16.88■□□□□ 0.29
NECAB3-219ENST00000606690 ZNF213O14771 459 aa16.87■□□□□ 0.29
NECAB3-219ENST00000606690 CSF2RAP15509 400 aa16.87■□□□□ 0.29
NECAB3-219ENST00000606690 DNAJB2P25686 324 aa16.87■□□□□ 0.29
NECAB3-219ENST00000606690 ALDH5A1P51649 535 aaPredicted RBP16.87■□□□□ 0.29
NECAB3-219ENST00000606690 ITGA7Q13683 1181 aa16.87■□□□□ 0.29
NECAB3-219ENST00000606690 TAPT1Q6NXT6 567 aa16.87■□□□□ 0.29
NECAB3-219ENST00000606690 CHD1LQ86WJ1 897 aa16.87■□□□□ 0.29
NECAB3-219ENST00000606690 SMC5Q8IY18 1101 aa16.87■□□□□ 0.29
NECAB3-219ENST00000606690 MAFAQ8NHW3 353 aaPredicted RBP16.87■□□□□ 0.29
NECAB3-219ENST00000606690 MYLIPQ8WY64 445 aa16.87■□□□□ 0.29
NECAB3-219ENST00000606690 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.87■□□□□ 0.297e-7■■□□□ 11.6
NECAB3-219ENST00000606690 TTYH1Q9H313 450 aaPredicted RBP16.87■□□□□ 0.29
NECAB3-219ENST00000606690 PDGFCQ9NRA1 345 aa16.87■□□□□ 0.29
NECAB3-219ENST00000606690 DIAPH3Q9NSV4 1193 aa16.87■□□□□ 0.29
NECAB3-219ENST00000606690 ASTN1O14525 1302 aa16.87■□□□□ 0.29
NECAB3-219ENST00000606690 DNAH12Q6ZR08 3092 aa16.86■□□□□ 0.29
NECAB3-219ENST00000606690 B4DLN1 442 aa16.86■□□□□ 0.29
NECAB3-219ENST00000606690 HIP1O00291 1037 aa16.86■□□□□ 0.29
NECAB3-219ENST00000606690 NFIBO00712 420 aa16.86■□□□□ 0.29
NECAB3-219ENST00000606690 SDSP20132 328 aa16.86■□□□□ 0.29
NECAB3-219ENST00000606690 CALML3P27482 149 aa16.86■□□□□ 0.29
NECAB3-219ENST00000606690 MRPL12P52815 198 aaKnown RBP16.86■□□□□ 0.29
NECAB3-219ENST00000606690 ZNF543Q08ER8 600 aa16.86■□□□□ 0.29
NECAB3-219ENST00000606690 CCDC178Q5BJE1 867 aa16.86■□□□□ 0.29
NECAB3-219ENST00000606690 GPATCH4Q5T3I0 446 aaKnown RBP16.86■□□□□ 0.29
NECAB3-219ENST00000606690 RNF207Q6ZRF8 634 aa16.86■□□□□ 0.29
NECAB3-219ENST00000606690 IQCA1Q86XH1 822 aa16.86■□□□□ 0.29
NECAB3-219ENST00000606690 MORC4Q8TE76 937 aa16.86■□□□□ 0.29
NECAB3-219ENST00000606690 YTHDC1Q96MU7 727 aaKnown RBP16.86■□□□□ 0.29
NECAB3-219ENST00000606690 HIPK3Q9H422 1215 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms