RNA–Protein interactions for RNA: ENST00000606102.1

HMGN2P28-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 28, humanhuman

BASIC

Gene HMGN2P28, Length 262 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P28-201ENST00000606102 FAM153BP0C7A2 387 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 TRIM27P14373 513 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 VCAM1P19320 739 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 POU3F3P20264 500 aaPredicted RBP4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 MCCP23508 829 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 CD96P40200 585 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 ERVK-24P63145 666 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 SUMO1P63165 101 aaKnown RBP4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 PTPN11Q06124 597 aaPredicted RBP4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 RING1Q06587 406 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 FAPQ12884 760 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 MINDY4Q4G0A6 757 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 INO80DQ53TQ3 878 aaPredicted RBP4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 C10orf62Q5T681 223 aaPredicted RBP4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 VHLLQ6RSH7 139 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 FAM214BQ7L5A3 538 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 LRRTM3Q86VH5 581 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 TP53INP2Q8IXH6 220 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 TOP6BLQ8N6T0 577 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 RNF214Q8ND24 703 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 USP7Q93009 1102 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 HOOK2Q96ED9 719 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 FBXL18Q96ME1 805 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 SCLT1Q96NL6 688 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 TTC1Q99614 292 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 DUSP23Q9BVJ7 150 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 EHMT1Q9H9B1 1298 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 BRMS1Q9HCU9 246 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 PCOLCE2Q9UKZ9 415 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 PLAGL2Q9UPG8 496 aa4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 APOBEC2Q9Y235 224 aaKnown RBP4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 MRPS23Q9Y3D9 190 aaKnown RBP4.8□□□□□ -1.64
HMGN2P28-201ENST00000606102 A0A1W2PQH9 124 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 ANO9A1A5B4 782 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 RASSF10A6NK89 507 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 ERC2O15083 957 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 GPR39O43194 453 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 CILPO75339 1184 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 TCEA3O75764 348 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 ATE1O95260 518 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 F2P00734 622 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 OXCT1P55809 520 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 POU5F1Q01860 360 aaKnown RBP4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 RPL6Q02878 288 aaKnown RBP4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 HSP90AA2PQ14568 343 aaPredicted RBP4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 C21orf62-AS1Q17RA5 79 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 BBS9Q3SYG4 887 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 ANO1Q5XXA6 986 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 BNC2Q6ZN30 1099 aaPredicted RBP4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 TTC6Q86TZ1 520 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 C12orf40Q86WS4 652 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 ZNF354CQ86Y25 554 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 SPICE1Q8N0Z3 855 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 UBR7Q8N806 425 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 PI4K2BQ8TCG2 481 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 JARID2Q92833 1246 aaPredicted RBP4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 HEXIM2Q96MH2 286 aaKnown RBP4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 HERPUD2Q9BSE4 406 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 DHRS4Q9BTZ2 278 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 SELENOOQ9BVL4 669 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 TARS2Q9BW92 718 aaKnown RBP4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 TNKS2Q9H2K2 1166 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 GOLGA2P5Q9HBQ8 144 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 PUF60Q9UHX1 559 aaKnown RBP4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 FBXO2Q9UK22 296 aaPredicted RBP4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 PCDHB14Q9Y5E9 798 aa4.79□□□□□ -1.64
HMGN2P28-201ENST00000606102 FAM221AA4D161 298 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 MEIS3P2A8K0S8 358 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 B2RBV5 119 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 B4E1Z4 1266 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 CCER2I3L3R5 266 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 SUSD5O60279 629 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 EFCAB14O75071 495 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 ITGB5P18084 799 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 DDIT3P35638 169 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 CCNFP41002 786 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 HTR3AP46098 478 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 CDK8P49336 464 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 INPP5AQ14642 412 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 SART3Q15020 963 aaKnown RBP4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 LRRC41Q15345 812 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 SLC10A6Q3KNW5 377 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 CYP27C1Q4G0S4 372 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 DRC7Q8IY82 874 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 OR2W6PQ8NHA6 318 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 LEO1Q8WVC0 666 aaPredicted RBP4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 TMEM40Q8WWA1 233 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 TRIM63Q969Q1 353 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 GAL3ST3Q96A11 431 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 ACSBG1Q96GR2 724 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 SLC39A13Q96H72 371 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 KRTAP9-9Q9BYP9 154 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 INO80BQ9C086 356 aaPredicted RBP4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 PPCSQ9HAB8 311 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 MAP3K20Q9NYL2 800 aaKnown RBP4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 PNMA8BQ9ULN7 279 aaPredicted RBP4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 RNF114Q9Y508 228 aa4.78□□□□□ -1.64
HMGN2P28-201ENST00000606102 TRBV23-1A0A0A0MS06 115 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms