RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 SPAG5Q96R06 1193 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 AP1M1Q9BXS5 423 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 CAPS2Q9BXY5 557 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 ARFGAP3Q9NP61 516 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 XPO7Q9UIA9 1087 aaKnown RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 MAP4K5Q9Y4K4 846 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 USP32Q8NFA0 1604 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 MED14O60244 1454 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 GTPBP10A4D1E9 387 aaKnown RBP5.28□□□□□ -1.56
LINC01109-201ENST00000603837 LGR5O75473 907 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 BBOX1O75936 387 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 ABL1P00519 1130 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 COL6A1P12109 1028 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 GRM5P41594 1212 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 SCNN1DP51172 638 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 SFSWAPQ12872 951 aaKnown RBP5.28□□□□□ -1.56
LINC01109-201ENST00000603837 TMEM95Q3KNT9 176 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 RCSD1Q6JBY9 416 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 SHQ1Q6PI26 577 aaKnown RBP5.28□□□□□ -1.56
LINC01109-201ENST00000603837 OTUD6AQ7L8S5 288 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 NUP133Q8WUM0 1156 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 KCTD15Q96SI1 283 aaPredicted RBP5.28□□□□□ -1.56
LINC01109-201ENST00000603837 MMADHCQ9H3L0 296 aaPredicted RBP5.28□□□□□ -1.56
LINC01109-201ENST00000603837 ZIM2Q9NZV7 527 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 ZMAT5Q9UDW3 170 aaKnown RBP5.28□□□□□ -1.56
LINC01109-201ENST00000603837 MROH1Q8NDA8 1641 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 SCAF11Q99590 1463 aaKnown RBP5.28□□□□□ -1.56
LINC01109-201ENST00000603837 H7C1W4 665 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 STXBP3O00186 592 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 SRGAP3O43295 1099 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 SGTAO43765 313 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 TIPRLO75663 272 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 SMPD1P17405 629 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 MX1P20591 662 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 VAMP1P23763 118 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 FSHRP23945 695 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 HOXA10P31260 410 aaPredicted RBP5.28□□□□□ -1.56
LINC01109-201ENST00000603837 CDR1P51861 262 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 IQCB1Q15051 598 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 GPATCH4Q5T3I0 446 aaKnown RBP5.28□□□□□ -1.56
LINC01109-201ENST00000603837 IRGCQ6NXR0 463 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 RASSF3Q86WH2 238 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 ZGPATQ8N5A5 531 aaKnown RBP5.28□□□□□ -1.56
LINC01109-201ENST00000603837 FAM81AQ8TBF8 368 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 BICD2Q8TD16 824 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 SH3TC2Q8TF17 1288 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 CACTINQ8WUQ7 758 aaKnown RBP5.28□□□□□ -1.56
LINC01109-201ENST00000603837 NACC2Q96BF6 587 aa5.28□□□□□ -1.56
LINC01109-201ENST00000603837 RBM17Q96I25 401 aaKnown RBP5.28□□□□□ -1.56
LINC01109-201ENST00000603837 ZNF521Q96K83 1311 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 ORC4O43929 436 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 GADD45BO75293 160 aaPredicted RBP5.27□□□□□ -1.57
LINC01109-201ENST00000603837 BAIAP3O94812 1187 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 ZNF24P17028 368 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 COPAP53621 1224 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 SLC8A3P57103 927 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 KCNB1Q14721 858 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 ASIC2Q16515 512 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 TKFCQ3LXA3 575 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 PKDCCQ504Y2 493 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 ARMC9Q7Z3E5 817 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 TRMT2AQ8IZ69 625 aaKnown RBP5.27□□□□□ -1.57
LINC01109-201ENST00000603837 KIRREL3Q8IZU9 778 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 GIMAP1Q8WWP7 306 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 CCDC114Q96M63 670 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 DESI2Q9BSY9 194 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 TRIM7Q9C029 511 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 HOMER2Q9NSB8 354 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 RGL1Q9NZL6 768 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 DNAI1Q9UI46 699 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 IPPQ9Y573 584 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 CAPN7Q9Y6W3 813 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 FAM169AQ9Y6X4 670 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 AATKQ6ZMQ8 1374 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 CLTCL1P53675 1640 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 CCDC163A0A0D9SF12 145 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 FOXD2O60548 495 aaPredicted RBP5.27□□□□□ -1.57
LINC01109-201ENST00000603837 MYCP01106 439 aaPredicted RBP5.27□□□□□ -1.57
LINC01109-201ENST00000603837 EZRP15311 586 aaKnown RBP5.27□□□□□ -1.57
LINC01109-201ENST00000603837 POU3F3P20264 500 aaPredicted RBP5.27□□□□□ -1.57
LINC01109-201ENST00000603837 GBP2P32456 591 aaPredicted RBP5.27□□□□□ -1.57
LINC01109-201ENST00000603837 GJA8P48165 433 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 SEPHS1P49903 392 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 GNAI1P63096 354 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 NR5A1Q13285 461 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 LVRNQ6Q4G3 990 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.27□□□□□ -1.57
LINC01109-201ENST00000603837 C11orf74Q86VG3 221 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 MCF2L2Q86YR7 1114 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 MFN1Q8IWA4 741 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 CNNM3Q8NE01 707 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 C1orf74Q96LT6 269 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 TESK2Q96S53 571 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 SERINC2Q96SA4 455 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 FUT8Q9BYC5 575 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 BICC1Q9H694 974 aaKnown RBP5.27□□□□□ -1.57
LINC01109-201ENST00000603837 C2CD2Q9Y426 696 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 SHPRHQ149N8 1683 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 TRIM64A6NGJ6 449 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 TRIM64BA6NI03 449 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms