RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 ABCF2Q9UG63 623 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 KATNA1O75449 491 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 MFAP3P55082 362 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 MAGEE1Q9HCI5 957 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 RAB3GAP2Q9H2M9 1393 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 DYTNA2CJ06 578 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 SMCO2A6NFE2 343 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 GNAT3A8MTJ3 354 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 F8W8V4 182 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 CSE1LP55060 971 aaKnown RBP3.7□□□□□ -1.82
NEB-218ENST00000603639 PTK2Q05397 1052 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 CNBD2Q96M20 576 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 GSAPA4D1B5 854 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 TSGA10IPQ3SY00 556 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 NOL8Q76FK4 1167 aaKnown RBP3.7□□□□□ -1.82
NEB-218ENST00000603639 MIEF2Q96C03 454 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 ANTXR1Q9H6X2 564 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 ARHGEF40Q8TER5 1519 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 TJP3O95049 919 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 KRT7P08729 469 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 CCT8P50990 548 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 IRX5P78411 483 aaPredicted RBP3.7□□□□□ -1.82
NEB-218ENST00000603639 NR1I3Q14994 352 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 MAPKAPK5Q8IW41 473 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 PYGBP11216 843 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 ADAM9Q13443 819 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 WASHC2DQ5SRD0 308 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 BPIFA3Q9BQP9 254 aa3.7□□□□□ -1.82
NEB-218ENST00000603639 ZBED4O75132 1171 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 KRT14P02533 472 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 GHRP10912 638 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 MKRN3Q13064 507 aaKnown RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 PRUNE1Q86TP1 453 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 RASSF3Q86WH2 238 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 C1orf131Q8NDD1 294 aaKnown RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 EXOC7Q9UPT5 735 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 CCDC61Q9Y6R9 512 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 CARMIL3Q8ND23 1372 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 SNX1Q13596 522 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 CTTNQ14247 550 aaKnown RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 KCTD21Q4G0X4 260 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 UNC13BO14795 1591 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 IFIT5Q13325 482 aaKnown RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 VAT1LQ9HCJ6 419 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 CABP5Q9NP86 173 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 C20orf96Q9NUD7 363 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 FBXO2Q9UK22 296 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 RIMS2Q9UQ26 1411 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 EXOC3O60645 756 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 CLCN2P51788 898 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 SFMBT2Q5VUG0 894 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 PCF11O94913 1555 aaKnown RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 RAP1GDS1P52306 607 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 DAB2IPQ5VWQ8 1189 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 KLHDC4Q8TBB5 520 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 SYN2Q92777 582 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 EML4Q9HC35 981 aaKnown RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 UBE4BO95155 1302 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 PTPRCP08575 1304 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 TOMM70O94826 608 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 GJB2P29033 226 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 SPG7Q9UQ90 795 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 GNGT2O14610 69 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 SGSM2O43147 1006 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 PRPF40BQ6NWY9 871 aaKnown RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 PEX26Q7Z412 305 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 TUBGCP3Q96CW5 907 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 GCOM2Q9BZD3 368 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 RUSC2Q8N2Y8 1516 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 ABTB2Q8N961 1025 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 KIF2CQ99661 725 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 SAR1AQ9NR31 198 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 PDE6AP16499 860 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 TPP2P29144 1249 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 KLC1Q07866 573 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 TTC13Q8NBP0 860 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 CORO1CQ9ULV4 474 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 ZFYVE9O95405 1425 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 PATL1Q86TB9 770 aaKnown RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 TRIM55Q9BYV6 548 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 TRIM15Q9C019 465 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 MRPL47Q9HD33 250 aaKnown RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 HGSO14964 777 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 FKBP6O75344 327 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 PRR29P0C7W0 189 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 PPARGP37231 505 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 IL12RB1P42701 662 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 ATN1P54259 1190 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 TSPYL4Q9UJ04 414 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 KDM5CP41229 1560 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 PARP1P09874 1014 aaKnown RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 PSMC4P43686 418 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 AASDHQ4L235 1098 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 HDGFL1Q5TGJ6 251 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 ANO1Q5XXA6 986 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 E4F1Q66K89 784 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 GRK7Q8WTQ7 553 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 FAM187AA6NFU0 413 aa3.69□□□□□ -1.82
NEB-218ENST00000603639 ACTN3Q08043 901 aaPredicted RBP3.69□□□□□ -1.82
NEB-218ENST00000603639 ATAD3BQ5T9A4 648 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms