RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 RANBP17Q9H2T7 1088 aaKnown RBP25.3■■□□□ 1.64
PPFIA3-211ENST00000602848 STX1AQ16623 288 aa25.3■■□□□ 1.64
PPFIA3-211ENST00000602848 DTHD1Q6ZMT9 781 aa25.3■■□□□ 1.64
PPFIA3-211ENST00000602848 CNNM3Q8NE01 707 aa25.3■■□□□ 1.64
PPFIA3-211ENST00000602848 ANO10Q9NW15 660 aa25.3■■□□□ 1.64
PPFIA3-211ENST00000602848 VWA3AA6NCI4 1184 aa25.29■■□□□ 1.64
PPFIA3-211ENST00000602848 FOSP01100 380 aaPredicted RBP25.29■■□□□ 1.64
PPFIA3-211ENST00000602848 FAM200AQ8TCP9 573 aa25.29■■□□□ 1.64
PPFIA3-211ENST00000602848 DCPSQ96C86 337 aaKnown RBP25.29■■□□□ 1.64
PPFIA3-211ENST00000602848 PICK1Q9NRD5 415 aa25.29■■□□□ 1.64
PPFIA3-211ENST00000602848 TMEM260Q9NX78 707 aa25.29■■□□□ 1.64
PPFIA3-211ENST00000602848 DOCK1Q14185 1865 aa25.28■■□□□ 1.64
PPFIA3-211ENST00000602848 GCFC2P16383 781 aaKnown RBP25.28■■□□□ 1.64
PPFIA3-211ENST00000602848 LETM2Q2VYF4 491 aa25.28■■□□□ 1.64
PPFIA3-211ENST00000602848 LONRF3Q496Y0 759 aa25.28■■□□□ 1.64
PPFIA3-211ENST00000602848 NOL9Q5SY16 702 aaKnown RBP25.28■■□□□ 1.64
PPFIA3-211ENST00000602848 PPP4R3AQ6IN85 833 aa25.28■■□□□ 1.64
PPFIA3-211ENST00000602848 ZNF526Q8TF50 670 aaPredicted RBP25.28■■□□□ 1.64
PPFIA3-211ENST00000602848 PNMA2Q9UL42 364 aa25.28■■□□□ 1.64
PPFIA3-211ENST00000602848 SCN4AP35499 1836 aa25.28■■□□□ 1.64
PPFIA3-211ENST00000602848 CCNT1O60563 726 aaKnown RBP25.27■■□□□ 1.64
PPFIA3-211ENST00000602848 INPP5BP32019 993 aa25.27■■□□□ 1.64
PPFIA3-211ENST00000602848 ZRSR1Q15695 479 aaKnown RBP25.27■■□□□ 1.64
PPFIA3-211ENST00000602848 SPECC1Q5M775 1068 aa25.27■■□□□ 1.64
PPFIA3-211ENST00000602848 USP50Q70EL3 339 aaPredicted RBP25.27■■□□□ 1.64
PPFIA3-211ENST00000602848 RNF214Q8ND24 703 aa25.27■■□□□ 1.64
PPFIA3-211ENST00000602848 KLRG1Q96E93 195 aa25.27■■□□□ 1.64
PPFIA3-211ENST00000602848 AK8Q96MA6 479 aa25.27■■□□□ 1.64
PPFIA3-211ENST00000602848 GLIS2Q9BZE0 524 aaPredicted RBP25.27■■□□□ 1.64
PPFIA3-211ENST00000602848 POLR2DO15514 142 aaKnown RBP25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 NEMFO60524 1076 aa25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 OR52Z1P0C646 297 aa25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 USP11P51784 963 aa25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 ZNF784Q8NCA9 323 aaPredicted RBP25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 ZC3H15Q8WU90 426 aaKnown RBP25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 SYMPKQ92797 1274 aaKnown RBP25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 WRNIP1Q96S55 665 aa25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 PANK2Q9BZ23 570 aa25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 NMRK2Q9NPI5 230 aa25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 TUBE1Q9UJT0 475 aa25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 PIK3CDO00329 1044 aa25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 FDX1P10109 184 aa25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 TXLNAP40222 546 aa25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 ANO6Q4KMQ2 910 aa25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 PRPF38AQ8NAV1 312 aaKnown RBP25.26■■□□□ 1.63
PPFIA3-211ENST00000602848 C19orf81C9J6K1 198 aa25.25■■□□□ 1.63
PPFIA3-211ENST00000602848 PTPRAP18433 802 aa25.25■■□□□ 1.63
PPFIA3-211ENST00000602848 ZYXQ15942 572 aaKnown RBP25.25■■□□□ 1.63
PPFIA3-211ENST00000602848 IL17AQ16552 155 aa25.25■■□□□ 1.63
PPFIA3-211ENST00000602848 UBE2SQ16763 222 aa25.25■■□□□ 1.63
PPFIA3-211ENST00000602848 SULF1Q8IWU6 871 aa25.25■■□□□ 1.63
PPFIA3-211ENST00000602848 MEIS2O14770 477 aa25.24■■□□□ 1.63
PPFIA3-211ENST00000602848 SLFN14P0C7P3 912 aa25.24■■□□□ 1.63
PPFIA3-211ENST00000602848 MDM2Q00987 491 aaPredicted RBP25.24■■□□□ 1.63
PPFIA3-211ENST00000602848 CCDC173Q0VFZ6 552 aa25.24■■□□□ 1.63
PPFIA3-211ENST00000602848 MOXD1Q6UVY6 613 aa25.24■■□□□ 1.63
PPFIA3-211ENST00000602848 ZNF280CQ8ND82 737 aa25.24■■□□□ 1.63
PPFIA3-211ENST00000602848 KIFC2Q96AC6 838 aa25.24■■□□□ 1.63
PPFIA3-211ENST00000602848 EPSTI1Q96J88 318 aa25.24■■□□□ 1.63
PPFIA3-211ENST00000602848 NAT10Q9H0A0 1025 aaKnown RBP25.24■■□□□ 1.63
PPFIA3-211ENST00000602848 TMEM60Q9H2L4 133 aa25.24■■□□□ 1.63
PPFIA3-211ENST00000602848 MRPL11Q9Y3B7 192 aaKnown RBP25.24■■□□□ 1.63
PPFIA3-211ENST00000602848 BACE1P56817 501 aa25.23■■□□□ 1.63
PPFIA3-211ENST00000602848 USP49Q70CQ1 688 aa25.23■■□□□ 1.63
PPFIA3-211ENST00000602848 IQUBQ8NA54 791 aa25.23■■□□□ 1.63
PPFIA3-211ENST00000602848 C12orf42Q96LP6 360 aa25.23■■□□□ 1.63
PPFIA3-211ENST00000602848 SLF1Q9BQI6 1058 aa25.23■■□□□ 1.63
PPFIA3-211ENST00000602848 SERTAD1Q9UHV2 236 aa25.23■■□□□ 1.63
PPFIA3-211ENST00000602848 ABCB11O95342 1321 aa25.23■■□□□ 1.63
PPFIA3-211ENST00000602848 ACTN4O43707 911 aaKnown RBP25.23■■□□□ 1.63
PPFIA3-211ENST00000602848 CCDC84Q86UT8 332 aaPredicted RBP25.23■■□□□ 1.63
PPFIA3-211ENST00000602848 MTMR9Q96QG7 549 aa25.23■■□□□ 1.63
PPFIA3-211ENST00000602848 PPP1R9BQ96SB3 815 aa25.23■■□□□ 1.63
PPFIA3-211ENST00000602848 CCSER1Q9C0I3 900 aa25.23■■□□□ 1.63
PPFIA3-211ENST00000602848 RRAGCQ9HB90 399 aa25.23■■□□□ 1.63
PPFIA3-211ENST00000602848 ZNF165P49910 485 aa25.22■■□□□ 1.63
PPFIA3-211ENST00000602848 NLRP12P59046 1061 aa25.22■■□□□ 1.63
PPFIA3-211ENST00000602848 SNAP25P60880 206 aa25.22■■□□□ 1.63
PPFIA3-211ENST00000602848 USH1GQ495M9 461 aa25.22■■□□□ 1.63
PPFIA3-211ENST00000602848 CEP57L1Q8IYX8 460 aa25.22■■□□□ 1.63
PPFIA3-211ENST00000602848 ZKSCAN4Q969J2 545 aaPredicted RBP25.22■■□□□ 1.63
PPFIA3-211ENST00000602848 ANO3Q9BYT9 981 aa25.22■■□□□ 1.63
PPFIA3-211ENST00000602848 CYP3A7-CYP3A51PA0A087WV96 503 aa25.21■■□□□ 1.63
PPFIA3-211ENST00000602848 SSC5DA1L4H1 1573 aa25.21■■□□□ 1.63
PPFIA3-211ENST00000602848 USP17L15C9J2P7 530 aa25.21■■□□□ 1.63
PPFIA3-211ENST00000602848 USP17L13C9JLJ4 530 aa25.21■■□□□ 1.63
PPFIA3-211ENST00000602848 USP17L11C9JVI0 530 aa25.21■■□□□ 1.63
PPFIA3-211ENST00000602848 USP17L18D6R9N7 530 aa25.21■■□□□ 1.63
PPFIA3-211ENST00000602848 USP17L22D6RA61 530 aa25.21■■□□□ 1.63
PPFIA3-211ENST00000602848 USP17L17D6RBQ6 530 aa25.21■■□□□ 1.63
PPFIA3-211ENST00000602848 USP17L19D6RCP7 530 aa25.21■■□□□ 1.63
PPFIA3-211ENST00000602848 USP17L20D6RJB6 530 aa25.21■■□□□ 1.63
PPFIA3-211ENST00000602848 CYP3A7P24462 503 aa25.21■■□□□ 1.63
PPFIA3-211ENST00000602848 USP17L24Q0WX57 530 aa25.21■■□□□ 1.63
PPFIA3-211ENST00000602848 SPP2Q13103 211 aa25.21■■□□□ 1.63
PPFIA3-211ENST00000602848 PRAMEF18Q5VWM3 479 aa25.21■■□□□ 1.63
PPFIA3-211ENST00000602848 USP17L6PQ6QN14 398 aa25.21■■□□□ 1.63
PPFIA3-211ENST00000602848 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.21■■□□□ 1.633e-7■■■□□ 16.8
PPFIA3-211ENST00000602848 EMILIN3Q9NT22 766 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms