RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ARVCFO00192 962 aa15.54■□□□□ 0.08
RPS28-204ENST00000602140 CTAGE5O15320 804 aa15.54■□□□□ 0.08
RPS28-204ENST00000602140 BEX3Q00994 111 aa15.54■□□□□ 0.08
RPS28-204ENST00000602140 TTBK2Q6IQ55 1244 aa15.54■□□□□ 0.08
RPS28-204ENST00000602140 DCAF4Q8WV16 495 aa15.54■□□□□ 0.08
RPS28-204ENST00000602140 CDX2Q99626 313 aaPredicted RBP15.54■□□□□ 0.08
RPS28-204ENST00000602140 CYP39A1Q9NYL5 469 aa15.54■□□□□ 0.08
RPS28-204ENST00000602140 TBX21Q9UL17 535 aa15.54■□□□□ 0.08
RPS28-204ENST00000602140 ICAM1P05362 532 aa15.53■□□□□ 0.08
RPS28-204ENST00000602140 HSPD1P10809 573 aaKnown RBP15.53■□□□□ 0.08
RPS28-204ENST00000602140 SLC16A2P36021 539 aa15.53■□□□□ 0.08
RPS28-204ENST00000602140 NKX3-2P78367 333 aa15.53■□□□□ 0.08
RPS28-204ENST00000602140 NMIQ13287 307 aaPredicted RBP15.53■□□□□ 0.08
RPS28-204ENST00000602140 NSMFQ6X4W1 530 aa15.53■□□□□ 0.08
RPS28-204ENST00000602140 ZNF589Q86UQ0 364 aaPredicted RBP15.53■□□□□ 0.08
RPS28-204ENST00000602140 PURBQ96QR8 312 aaKnown RBP15.53■□□□□ 0.08
RPS28-204ENST00000602140 LNPKQ9C0E8 428 aa15.53■□□□□ 0.08
RPS28-204ENST00000602140 RANBP17Q9H2T7 1088 aaKnown RBP15.53■□□□□ 0.08
RPS28-204ENST00000602140 TTYH1Q9H313 450 aaPredicted RBP15.53■□□□□ 0.08
RPS28-204ENST00000602140 GNEQ9Y223 722 aaKnown RBP15.53■□□□□ 0.08
RPS28-204ENST00000602140 EYSQ5T1H1 3165 aa15.53■□□□□ 0.08
RPS28-204ENST00000602140 FRMPD2Q68DX3 1309 aaPredicted RBP15.52■□□□□ 0.08
RPS28-204ENST00000602140 TRIM6-TRIM34B2RNG4 842 aa15.52■□□□□ 0.08
RPS28-204ENST00000602140 TOP1P11387 765 aaKnown RBP15.52■□□□□ 0.08
RPS28-204ENST00000602140 PTGS1P23219 599 aa15.52■□□□□ 0.08
RPS28-204ENST00000602140 HAND2P61296 217 aa15.52■□□□□ 0.08
RPS28-204ENST00000602140 SYDE2Q5VT97 1194 aa15.52■□□□□ 0.08
RPS28-204ENST00000602140 MFSD5Q6N075 450 aa15.52■□□□□ 0.08
RPS28-204ENST00000602140 CXCL17Q6UXB2 119 aa15.52■□□□□ 0.08
RPS28-204ENST00000602140 BTNL9Q6UXG8 535 aa15.52■□□□□ 0.08
RPS28-204ENST00000602140 EEPD1Q7L9B9 569 aa15.52■□□□□ 0.08
RPS28-204ENST00000602140 TLK2Q86UE8 772 aa15.52■□□□□ 0.08
RPS28-204ENST00000602140 FAM126BQ8IXS8 530 aa15.52■□□□□ 0.08
RPS28-204ENST00000602140 RILPL2Q969X0 211 aa15.52■□□□□ 0.08
RPS28-204ENST00000602140 TMEM47Q9BQJ4 181 aa15.52■□□□□ 0.08
RPS28-204ENST00000602140 GPCPD1Q9NPB8 672 aa15.52■□□□□ 0.08
RPS28-204ENST00000602140 PDGFCQ9NRA1 345 aa15.52■□□□□ 0.08
RPS28-204ENST00000602140 TCP11L1Q9NUJ3 509 aa15.52■□□□□ 0.08
RPS28-204ENST00000602140 TLR3O15455 904 aaKnown RBP15.51■□□□□ 0.07
RPS28-204ENST00000602140 DYNC1LI2O43237 492 aaPredicted RBP15.51■□□□□ 0.07
RPS28-204ENST00000602140 SMPD1P17405 629 aa15.51■□□□□ 0.07
RPS28-204ENST00000602140 BAATQ14032 418 aaPredicted RBP15.51■□□□□ 0.07
RPS28-204ENST00000602140 FSCN1Q16658 493 aaKnown RBP15.51■□□□□ 0.07
RPS28-204ENST00000602140 TAPT1Q6NXT6 567 aa15.51■□□□□ 0.07
RPS28-204ENST00000602140 TICAM2Q86XR7 235 aa15.51■□□□□ 0.07
RPS28-204ENST00000602140 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.51■□□□□ 0.07
RPS28-204ENST00000602140 FBXO16Q8IX29 292 aaPredicted RBP15.51■□□□□ 0.07
RPS28-204ENST00000602140 MYLIPQ8WY64 445 aa15.51■□□□□ 0.07
RPS28-204ENST00000602140 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.51■□□□□ 0.073e-13■■■□□ 14.8
RPS28-204ENST00000602140 PPP1R12CQ9BZL4 782 aa15.51■□□□□ 0.07
RPS28-204ENST00000602140 AP5M1Q9H0R1 490 aa15.51■□□□□ 0.07
RPS28-204ENST00000602140 CDH23Q9H251 3354 aa15.51■□□□□ 0.07
RPS28-204ENST00000602140 ZMYM6O95789 1325 aa15.5■□□□□ 0.07
RPS28-204ENST00000602140 CCDC171Q6TFL3 1326 aa15.5■□□□□ 0.07
RPS28-204ENST00000602140 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.5■□□□□ 0.07
RPS28-204ENST00000602140 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.5■□□□□ 0.07
RPS28-204ENST00000602140 PDHBP11177 359 aa15.5■□□□□ 0.07
RPS28-204ENST00000602140 PPIGQ13427 754 aaKnown RBP eCLIP15.5■□□□□ 0.07
RPS28-204ENST00000602140 TMEM63BQ5T3F8 832 aa15.5■□□□□ 0.07
RPS28-204ENST00000602140 IQSEC1Q6DN90 963 aa15.5■□□□□ 0.07
RPS28-204ENST00000602140 B4GALNT3Q6L9W6 998 aa15.5■□□□□ 0.07
RPS28-204ENST00000602140 MFSD6Q6ZSS7 791 aa15.5■□□□□ 0.07
RPS28-204ENST00000602140 LRRC37A2A6NM11 1700 aa15.49■□□□□ 0.07
RPS28-204ENST00000602140 PTPDC1A2A3K4 754 aa15.49■□□□□ 0.07
RPS28-204ENST00000602140 NFIBO00712 420 aa15.49■□□□□ 0.07
RPS28-204ENST00000602140 ZEB2O60315 1214 aa15.49■□□□□ 0.07
RPS28-204ENST00000602140 CABYRO75952 493 aa15.49■□□□□ 0.07
RPS28-204ENST00000602140 CD4P01730 458 aa15.49■□□□□ 0.07
RPS28-204ENST00000602140 CSF2RAP15509 400 aa15.49■□□□□ 0.07
RPS28-204ENST00000602140 ITGA7Q13683 1181 aa15.49■□□□□ 0.07
RPS28-204ENST00000602140 AKNAD1Q5T1N1 836 aa15.49■□□□□ 0.07
RPS28-204ENST00000602140 KIAA1211Q6ZU35 1233 aa15.49■□□□□ 0.07
RPS28-204ENST00000602140 C16orf59Q7L2K0 433 aa15.49■□□□□ 0.07
RPS28-204ENST00000602140 SMC5Q8IY18 1101 aa15.49■□□□□ 0.07
RPS28-204ENST00000602140 TMEM199Q8N511 208 aa15.49■□□□□ 0.07
RPS28-204ENST00000602140 MAFAQ8NHW3 353 aaPredicted RBP15.49■□□□□ 0.07
RPS28-204ENST00000602140 MORC4Q8TE76 937 aa15.49■□□□□ 0.07
RPS28-204ENST00000602140 VTA1Q9NP79 307 aa15.49■□□□□ 0.07
RPS28-204ENST00000602140 ADD3Q9UEY8 706 aaKnown RBP15.49■□□□□ 0.07
RPS28-204ENST00000602140 TMEM265A0A087WTH1 108 aa15.48■□□□□ 0.07
RPS28-204ENST00000602140 ACRP10323 421 aa15.48■□□□□ 0.07
RPS28-204ENST00000602140 PCP11498 1178 aaKnown RBP15.48■□□□□ 0.07
RPS28-204ENST00000602140 SDSP20132 328 aa15.48■□□□□ 0.07
RPS28-204ENST00000602140 DNAJB2P25686 324 aa15.48■□□□□ 0.07
RPS28-204ENST00000602140 CYP2C18P33260 490 aa15.48■□□□□ 0.07
RPS28-204ENST00000602140 ALDH5A1P51649 535 aaPredicted RBP15.48■□□□□ 0.07
RPS28-204ENST00000602140 ZNF543Q08ER8 600 aa15.48■□□□□ 0.07
RPS28-204ENST00000602140 AAMPQ13685 434 aa15.48■□□□□ 0.07
RPS28-204ENST00000602140 TMEM240Q5SV17 173 aa15.48■□□□□ 0.07
RPS28-204ENST00000602140 TBC1D10CQ8IV04 446 aa15.48■□□□□ 0.07
RPS28-204ENST00000602140 SLC43A3Q8NBI5 491 aa15.48■□□□□ 0.07
RPS28-204ENST00000602140 TTC14Q96N46 770 aa15.48■□□□□ 0.07
RPS28-204ENST00000602140 RWDD1Q9H446 243 aaPredicted RBP15.48■□□□□ 0.07
RPS28-204ENST00000602140 Q9Y3F1 56 aa15.48■□□□□ 0.07
RPS28-204ENST00000602140 GRIN2DO15399 1336 aa15.47■□□□□ 0.07
RPS28-204ENST00000602140 LCTP09848 1927 aa15.47■□□□□ 0.07
RPS28-204ENST00000602140 FOSL2P15408 326 aa15.47■□□□□ 0.07
RPS28-204ENST00000602140 CALML3P27482 149 aa15.47■□□□□ 0.07
RPS28-204ENST00000602140 MFAP1P55081 439 aaKnown RBP15.47■□□□□ 0.07
RPS28-204ENST00000602140 SLC30A10Q6XR72 485 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms