RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	TRIM58	Q8NG06	486 aa		18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	KAT2B	Q92831	832 aa		18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	MAGEB6P1	A0A0J9YX57	407 aa		18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	EPB41	P11171	864 aa	Known RBP	18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	SWT1	Q5T5J6	900 aa	Known RBP	18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	SUSD4	Q5VX71	490 aa		18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	MCTP2	Q6DN12	878 aa		18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	ANKRD18A	Q8IVF6	992 aa		18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	DUSP9	Q99956	384 aa	Known RBP	18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	HINFP	Q9BQA5	517 aa		18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	BTG4	Q9NY30	223 aa		18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	SLIT2	O94813	1529 aa		18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	ZNF263	O14978	683 aa		18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	MYL1	P05976	194 aa		18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	IL6ST	P40189	918 aa	Predicted RBP	18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	SF3B2	Q13435	895 aa	Known RBP	18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	SPATA4	Q8NEY3	305 aa		18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	DHTKD1	Q96HY7	919 aa	Predicted RBP	18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	LRWD1	Q9UFC0	647 aa		18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	DLEC1	Q9Y238	1755 aa		18.51	■□□□□ 0.55
CAPN12-211	ENST00000601685	TACC1	O75410	805 aa		18.5	■□□□□ 0.55
CAPN12-211	ENST00000601685	FGR	P09769	529 aa		18.5	■□□□□ 0.55
CAPN12-211	ENST00000601685	SKOR1	P84550	965 aa		18.5	■□□□□ 0.55
CAPN12-211	ENST00000601685	SPA17	Q15506	151 aa		18.5	■□□□□ 0.55
CAPN12-211	ENST00000601685	PFKFB3	Q16875	520 aa	Predicted RBP	18.5	■□□□□ 0.55
CAPN12-211	ENST00000601685	FIGN	Q5HY92	759 aa		18.5	■□□□□ 0.55
CAPN12-211	ENST00000601685	CSGALNACT2	Q8N6G5	542 aa		18.5	■□□□□ 0.55
CAPN12-211	ENST00000601685	CYP2D7	A0A087X1C5	515 aa		18.5	■□□□□ 0.55
CAPN12-211	ENST00000601685		A0A1W2PQJ5	194 aa		18.5	■□□□□ 0.55
CAPN12-211	ENST00000601685	EPHB4	P54760	987 aa		18.5	■□□□□ 0.55
CAPN12-211	ENST00000601685	ALS2CL	Q60I27	953 aa		18.5	■□□□□ 0.55
CAPN12-211	ENST00000601685	SMCR8	Q8TEV9	937 aa	Predicted RBP	18.5	■□□□□ 0.55
CAPN12-211	ENST00000601685	CEP89	Q96ST8	783 aa		18.5	■□□□□ 0.55
CAPN12-211	ENST00000601685	USO1	O60763	962 aa	Known RBP	18.49	■□□□□ 0.55
CAPN12-211	ENST00000601685	EMB	Q6PCB8	327 aa		18.49	■□□□□ 0.55
CAPN12-211	ENST00000601685	POTED	Q86YR6	584 aa		18.49	■□□□□ 0.55
CAPN12-211	ENST00000601685	CCDC42	Q96M95	316 aa		18.49	■□□□□ 0.55
CAPN12-211	ENST00000601685	SH2D4A	Q9H788	454 aa		18.49	■□□□□ 0.55
CAPN12-211	ENST00000601685	KBTBD4	Q9NVX7	518 aa		18.49	■□□□□ 0.55
CAPN12-211	ENST00000601685	CAPN6	Q9Y6Q1	641 aa		18.49	■□□□□ 0.55
CAPN12-211	ENST00000601685		A6NNZ2	444 aa		18.49	■□□□□ 0.55
CAPN12-211	ENST00000601685	PC	P11498	1178 aa	Known RBP	18.49	■□□□□ 0.55
CAPN12-211	ENST00000601685	VEGFA	P15692	232 aa	Predicted RBP	18.49	■□□□□ 0.55
CAPN12-211	ENST00000601685	CCDC96	Q2M329	555 aa		18.49	■□□□□ 0.55
CAPN12-211	ENST00000601685	TUBB8	Q3ZCM7	444 aa		18.49	■□□□□ 0.55
CAPN12-211	ENST00000601685	KRT26	Q7Z3Y9	468 aa		18.49	■□□□□ 0.55
CAPN12-211	ENST00000601685	TSEN2	Q8NCE0	465 aa	Known RBP	18.49	■□□□□ 0.55
CAPN12-211	ENST00000601685	PCMTD1	Q96MG8	357 aa	Predicted RBP	18.49	■□□□□ 0.55
CAPN12-211	ENST00000601685	RIOK1	Q9BRS2	568 aa	Known RBP	18.49	■□□□□ 0.55
CAPN12-211	ENST00000601685	CAVIN3	Q969G5	261 aa		18.48	■□□□□ 0.55
CAPN12-211	ENST00000601685	CNOT6L	Q96LI5	555 aa	Known RBP	18.48	■□□□□ 0.55
CAPN12-211	ENST00000601685	ERGIC2	Q96RQ1	377 aa		18.48	■□□□□ 0.55
CAPN12-211	ENST00000601685	NCAPG	Q9BPX3	1015 aa		18.48	■□□□□ 0.55
CAPN12-211	ENST00000601685	RABEP2	Q9H5N1	569 aa		18.48	■□□□□ 0.55
CAPN12-211	ENST00000601685	TCP1	P17987	556 aa	Known RBP	18.48	■□□□□ 0.55
CAPN12-211	ENST00000601685	CCNE1	P24864	410 aa		18.48	■□□□□ 0.55
CAPN12-211	ENST00000601685	SLC7A5	Q01650	507 aa		18.48	■□□□□ 0.55
CAPN12-211	ENST00000601685	TTMP	Q5BVD1	217 aa		18.48	■□□□□ 0.55
CAPN12-211	ENST00000601685	MIIP	Q5JXC2	388 aa		18.48	■□□□□ 0.55
CAPN12-211	ENST00000601685	DTHD1	Q6ZMT9	781 aa		18.48	■□□□□ 0.55
CAPN12-211	ENST00000601685	FAM114A1	Q8IWE2	563 aa		18.48	■□□□□ 0.55
CAPN12-211	ENST00000601685	P2RX5	Q93086	422 aa		18.48	■□□□□ 0.55
CAPN12-211	ENST00000601685	ARL8A	Q96BM9	186 aa		18.48	■□□□□ 0.55
CAPN12-211	ENST00000601685	OSBPL9	Q96SU4	736 aa		18.48	■□□□□ 0.55
CAPN12-211	ENST00000601685	PCDHA13	Q9Y5I0	950 aa		18.48	■□□□□ 0.55
CAPN12-211	ENST00000601685	PP2D1	A8MPX8	630 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	CALML3	P27482	149 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	TNFRSF8	P28908	595 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	HNRNPH3	P31942	346 aa	Known RBP	18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	INPP5B	P32019	993 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	HAUS3	Q68CZ6	603 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	BLID	Q8IZY5	108 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	RASSF8	Q8NHQ8	419 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	BRIP1	Q9BX63	1249 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	MLXIP	Q9HAP2	919 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	BICDL2	A1A5D9	508 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	HSF2BP	O75031	334 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	PLEK	P08567	350 aa	Predicted RBP	18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	HNRNPH1	P31943	449 aa	Known RBP	18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	MTIF2	P46199	727 aa	Known RBP	18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	NOC4L	Q9BVI4	516 aa	Known RBP	18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	IFIH1	Q9BYX4	1025 aa	Known RBP	18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	CCSER1	Q9C0I3	900 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	STIM2	Q9P246	746 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	ABCF2	Q9UG63	623 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	HYOU1	Q9Y4L1	999 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	FAM205A	Q6ZU69	1335 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	NHSL1	Q5SYE7	1610 aa		18.47	■□□□□ 0.55
CAPN12-211	ENST00000601685	MOCS3	O95396	460 aa		18.46	■□□□□ 0.55
CAPN12-211	ENST00000601685	ANKRD40	Q6AI12	368 aa		18.46	■□□□□ 0.55
CAPN12-211	ENST00000601685	TTC19	Q6DKK2	380 aa	Predicted RBP	18.46	■□□□□ 0.55
CAPN12-211	ENST00000601685	IQCD	Q96DY2	449 aa		18.46	■□□□□ 0.55
CAPN12-211	ENST00000601685	RUFY1	Q96T51	708 aa		18.46	■□□□□ 0.55
CAPN12-211	ENST00000601685	PLAGL2	Q9UPG8	496 aa		18.46	■□□□□ 0.55
CAPN12-211	ENST00000601685	ATXN2	Q99700	1313 aa	Known RBP	18.46	■□□□□ 0.55
CAPN12-211	ENST00000601685	IGHMBP2	P38935	993 aa	Known RBP	18.46	■□□□□ 0.55
CAPN12-211	ENST00000601685	UBA7	P41226	1012 aa		18.46	■□□□□ 0.55
CAPN12-211	ENST00000601685	MATR3	P43243	847 aa	Known RBP eCLIP	18.46	■□□□□ 0.55
CAPN12-211	ENST00000601685	MRPS25	P82663	173 aa	Known RBP	18.46	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms