RNA–Protein interactions for RNA: ENST00000601582.1

SYMPK-216, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-216ENST00000601582 LCTP09848 1927 aa13.76□□□□□ -0.21
SYMPK-216ENST00000601582 PQBP1O60828 265 aaKnown RBP13.75□□□□□ -0.21
SYMPK-216ENST00000601582 C6orf222P0C671 652 aaPredicted RBP13.75□□□□□ -0.21
SYMPK-216ENST00000601582 PCP11498 1178 aaKnown RBP13.75□□□□□ -0.21
SYMPK-216ENST00000601582 PTGS1P23219 599 aa13.75□□□□□ -0.21
SYMPK-216ENST00000601582 NSMFQ6X4W1 530 aa13.75□□□□□ -0.21
SYMPK-216ENST00000601582 RNF41Q9H4P4 317 aaPredicted RBP13.75□□□□□ -0.21
SYMPK-216ENST00000601582 STARD7Q9NQZ5 370 aa13.75□□□□□ -0.21
SYMPK-216ENST00000601582 MOXD2PA6NHM9 499 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 ASB14A6NK59 587 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 NFIBO00712 420 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 CTAGE5O15320 804 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 KDM4AO75164 1064 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 ASGR1P07306 291 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 CLTBP09497 229 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 SNHG28P0DPA3 235 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 GJA9P57773 515 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 ZNF543Q08ER8 600 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 BAATQ14032 418 aaPredicted RBP13.74□□□□□ -0.21
SYMPK-216ENST00000601582 SHHQ15465 462 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 C9orf50Q5SZB4 431 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 TMEM63BQ5T3F8 832 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 GPR153Q6NV75 609 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 EEPD1Q7L9B9 569 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 DEFB123Q8N688 67 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 NUP133Q8WUM0 1156 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 ESR2Q92731 530 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 UPF3AQ9H1J1 476 aaKnown RBP13.74□□□□□ -0.21
SYMPK-216ENST00000601582 PDGFCQ9NRA1 345 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 LAMA4Q16363 1823 aa13.74□□□□□ -0.21
SYMPK-216ENST00000601582 B4E1Z4 1266 aa13.73□□□□□ -0.21
SYMPK-216ENST00000601582 HIP1O00291 1037 aa13.73□□□□□ -0.21
SYMPK-216ENST00000601582 GOLGA8HP0CJ92 632 aa13.73□□□□□ -0.21
SYMPK-216ENST00000601582 GSPT1P15170 499 aaKnown RBP13.73□□□□□ -0.21
SYMPK-216ENST00000601582 CST5P28325 142 aaPredicted RBP13.73□□□□□ -0.21
SYMPK-216ENST00000601582 BEX3Q00994 111 aa13.73□□□□□ -0.21
SYMPK-216ENST00000601582 TNFAIP2Q03169 654 aa13.73□□□□□ -0.21
SYMPK-216ENST00000601582 FAAP100Q0VG06 881 aa13.73□□□□□ -0.21
SYMPK-216ENST00000601582 GNASQ5JWF2 1037 aa13.73□□□□□ -0.21
SYMPK-216ENST00000601582 TAPT1Q6NXT6 567 aa13.73□□□□□ -0.21
SYMPK-216ENST00000601582 NOL8Q76FK4 1167 aaKnown RBP13.73□□□□□ -0.21
SYMPK-216ENST00000601582 ANKRD33Q7Z3H0 272 aa13.73□□□□□ -0.21
SYMPK-216ENST00000601582 DGKHQ86XP1 1220 aa13.73□□□□□ -0.21
SYMPK-216ENST00000601582 PCSK9Q8NBP7 692 aaKnown RBP13.73□□□□□ -0.21
SYMPK-216ENST00000601582 TOX2Q96NM4 488 aa13.73□□□□□ -0.21
SYMPK-216ENST00000601582 DSCC1Q9BVC3 393 aa13.73□□□□□ -0.21
SYMPK-216ENST00000601582 UBA5Q9GZZ9 404 aa13.73□□□□□ -0.21
SYMPK-216ENST00000601582 CPVLQ9H3G5 476 aa13.73□□□□□ -0.21
SYMPK-216ENST00000601582 SPC25Q9HBM1 224 aa13.73□□□□□ -0.21
SYMPK-216ENST00000601582 GNEQ9Y223 722 aaKnown RBP13.73□□□□□ -0.21
SYMPK-216ENST00000601582 KIAA0355O15063 1070 aa13.72□□□□□ -0.21
SYMPK-216ENST00000601582 SMPD1P17405 629 aa13.72□□□□□ -0.21
SYMPK-216ENST00000601582 CDK7P50613 346 aa13.72□□□□□ -0.21
SYMPK-216ENST00000601582 EPHB4P54760 987 aa13.72□□□□□ -0.21
SYMPK-216ENST00000601582 TTC22Q5TAA0 569 aa13.72□□□□□ -0.21
SYMPK-216ENST00000601582 FBXO16Q8IX29 292 aaPredicted RBP13.72□□□□□ -0.21
SYMPK-216ENST00000601582 CLEC4DQ8WXI8 215 aa13.72□□□□□ -0.21
SYMPK-216ENST00000601582 VTI1AQ96AJ9 217 aa13.72□□□□□ -0.21
SYMPK-216ENST00000601582 GLT1D1Q96MS3 346 aa13.72□□□□□ -0.21
SYMPK-216ENST00000601582 TMEM39AQ9NV64 488 aa13.72□□□□□ -0.21
SYMPK-216ENST00000601582 ZSWIM5Q9P217 1185 aa13.72□□□□□ -0.21
SYMPK-216ENST00000601582 LRRC37A2A6NM11 1700 aa13.72□□□□□ -0.21
SYMPK-216ENST00000601582 ELP1O95163 1332 aa13.71□□□□□ -0.21
SYMPK-216ENST00000601582 PTPDC1A2A3K4 754 aa13.71□□□□□ -0.21
SYMPK-216ENST00000601582 DCDC2CA8MYV0 355 aa13.71□□□□□ -0.21
SYMPK-216ENST00000601582 DYNC1LI2O43237 492 aaPredicted RBP13.71□□□□□ -0.21
SYMPK-216ENST00000601582 RAG1P15918 1043 aa13.71□□□□□ -0.21
SYMPK-216ENST00000601582 NKX3-2P78367 333 aa13.71□□□□□ -0.21
SYMPK-216ENST00000601582 IMMTQ16891 758 aaKnown RBP13.71□□□□□ -0.21
SYMPK-216ENST00000601582 SLC30A10Q6XR72 485 aa13.71□□□□□ -0.21
SYMPK-216ENST00000601582 IQCA1Q86XH1 822 aa13.71□□□□□ -0.21
SYMPK-216ENST00000601582 PNMA1Q8ND90 353 aa13.71□□□□□ -0.21
SYMPK-216ENST00000601582 MORC4Q8TE76 937 aa13.71□□□□□ -0.21
SYMPK-216ENST00000601582 ZSCAN10Q96SZ4 725 aaPredicted RBP13.71□□□□□ -0.21
SYMPK-216ENST00000601582 MTMR10Q9NXD2 777 aa13.71□□□□□ -0.21
SYMPK-216ENST00000601582 ARVCFO00192 962 aa13.7□□□□□ -0.22
SYMPK-216ENST00000601582 CALML3P27482 149 aa13.7□□□□□ -0.22
SYMPK-216ENST00000601582 ALDH5A1P51649 535 aaPredicted RBP13.7□□□□□ -0.22
SYMPK-216ENST00000601582 IQSEC1Q6DN90 963 aa13.7□□□□□ -0.22
SYMPK-216ENST00000601582 RNF207Q6ZRF8 634 aa13.7□□□□□ -0.22
SYMPK-216ENST00000601582 KIAA1211Q6ZU35 1233 aa13.7□□□□□ -0.22
SYMPK-216ENST00000601582 TLK2Q86UE8 772 aa13.7□□□□□ -0.22
SYMPK-216ENST00000601582 ENAHQ8N8S7 591 aaPredicted RBP13.7□□□□□ -0.22
SYMPK-216ENST00000601582 ANKS1AQ92625 1134 aa13.7□□□□□ -0.22
SYMPK-216ENST00000601582 KAT14Q9H8E8 782 aa13.7□□□□□ -0.22
SYMPK-216ENST00000601582 CTNNA3Q9UI47 895 aa13.7□□□□□ -0.22
SYMPK-216ENST00000601582 A0A0U1RQG5 324 aaPredicted RBP13.69□□□□□ -0.22
SYMPK-216ENST00000601582 RPS6P62753 249 aaKnown RBP13.69□□□□□ -0.22
SYMPK-216ENST00000601582 FSCN1Q16658 493 aaKnown RBP13.69□□□□□ -0.22
SYMPK-216ENST00000601582 USH1GQ495M9 461 aa13.69□□□□□ -0.22
SYMPK-216ENST00000601582 CCDC178Q5BJE1 867 aa13.69□□□□□ -0.22
SYMPK-216ENST00000601582 GPATCH4Q5T3I0 446 aaKnown RBP13.69□□□□□ -0.22
SYMPK-216ENST00000601582 CXCL17Q6UXB2 119 aa13.69□□□□□ -0.22
SYMPK-216ENST00000601582 AP5M1Q9H0R1 490 aa13.69□□□□□ -0.22
SYMPK-216ENST00000601582 VTA1Q9NP79 307 aa13.69□□□□□ -0.22
SYMPK-216ENST00000601582 ADD3Q9UEY8 706 aaKnown RBP13.69□□□□□ -0.22
SYMPK-216ENST00000601582 TBX21Q9UL17 535 aa13.69□□□□□ -0.22
SYMPK-216ENST00000601582 LAMA2P24043 3122 aaKnown RBP13.69□□□□□ -0.22
SYMPK-216ENST00000601582 TNKSO95271 1327 aa13.68□□□□□ -0.22
SYMPK-216ENST00000601582 WDR19Q8NEZ3 1342 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms