RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 UBE2OQ9C0C9 1292 aaKnown RBP26.6■■□□□ 1.85
SSBP4-209ENST00000601357 ASB14A6NK59 587 aa26.59■■□□□ 1.85
SSBP4-209ENST00000601357 CHMLP26374 656 aa26.59■■□□□ 1.85
SSBP4-209ENST00000601357 CST5P28325 142 aaPredicted RBP26.59■■□□□ 1.85
SSBP4-209ENST00000601357 MDM2Q00987 491 aaPredicted RBP26.59■■□□□ 1.85
SSBP4-209ENST00000601357 GPATCH4Q5T3I0 446 aaKnown RBP26.59■■□□□ 1.85
SSBP4-209ENST00000601357 TDHQ8IZJ6 230 aa26.59■■□□□ 1.85
SSBP4-209ENST00000601357 ENAHQ8N8S7 591 aaPredicted RBP26.59■■□□□ 1.85
SSBP4-209ENST00000601357 PNMA1Q8ND90 353 aa26.59■■□□□ 1.85
SSBP4-209ENST00000601357 ZSCAN10Q96SZ4 725 aaPredicted RBP26.59■■□□□ 1.85
SSBP4-209ENST00000601357 UPF3AQ9H1J1 476 aaKnown RBP26.59■■□□□ 1.85
SSBP4-209ENST00000601357 CNNM2Q9H8M5 875 aa26.59■■□□□ 1.85
SSBP4-209ENST00000601357 ACLYP53396 1101 aa26.58■■□□□ 1.85
SSBP4-209ENST00000601357 KRT23Q9C075 422 aa26.58■■□□□ 1.85
SSBP4-209ENST00000601357 MYADML2A6NDP7 307 aa26.57■■□□□ 1.84
SSBP4-209ENST00000601357 MOXD2PA6NHM9 499 aa26.57■■□□□ 1.84
SSBP4-209ENST00000601357 NFIBO00712 420 aa26.57■■□□□ 1.84
SSBP4-209ENST00000601357 GJA9P57773 515 aa26.57■■□□□ 1.84
SSBP4-209ENST00000601357 NKX3-2P78367 333 aa26.57■■□□□ 1.84
SSBP4-209ENST00000601357 NSMFQ6X4W1 530 aa26.57■■□□□ 1.84
SSBP4-209ENST00000601357 MORC4Q8TE76 937 aa26.57■■□□□ 1.84
SSBP4-209ENST00000601357 RUFY2Q8WXA3 655 aa26.57■■□□□ 1.84
SSBP4-209ENST00000601357 CLEC4DQ8WXI8 215 aa26.57■■□□□ 1.84
SSBP4-209ENST00000601357 PDLIM7Q9NR12 457 aa26.57■■□□□ 1.84
SSBP4-209ENST00000601357 PNMA2Q9UL42 364 aa26.57■■□□□ 1.84
SSBP4-209ENST00000601357 WDR19Q8NEZ3 1342 aa26.57■■□□□ 1.84
SSBP4-209ENST00000601357 GOLGA8HP0CJ92 632 aa26.56■■□□□ 1.84
SSBP4-209ENST00000601357 IRX5P78411 483 aaPredicted RBP26.56■■□□□ 1.84
SSBP4-209ENST00000601357 KCNA10Q16322 511 aa26.56■■□□□ 1.84
SSBP4-209ENST00000601357 LRIT3Q3SXY7 679 aa26.56■■□□□ 1.84
SSBP4-209ENST00000601357 PURBQ96QR8 312 aaKnown RBP26.56■■□□□ 1.84
SSBP4-209ENST00000601357 KAT14Q9H8E8 782 aa26.56■■□□□ 1.84
SSBP4-209ENST00000601357 PRKAG2Q9UGJ0 569 aa26.56■■□□□ 1.84
SSBP4-209ENST00000601357 DDX49Q9Y6V7 483 aaKnown RBP26.56■■□□□ 1.84
SSBP4-209ENST00000601357 TNKSO95271 1327 aa26.56■■□□□ 1.84
SSBP4-209ENST00000601357 LAMA2P24043 3122 aaKnown RBP26.56■■□□□ 1.84
SSBP4-209ENST00000601357 CTAGE5O15320 804 aa26.55■■□□□ 1.84
SSBP4-209ENST00000601357 TLE2Q04725 743 aa26.55■■□□□ 1.84
SSBP4-209ENST00000601357 BAATQ14032 418 aaPredicted RBP26.55■■□□□ 1.84
SSBP4-209ENST00000601357 LRCH3Q96II8 777 aa26.55■■□□□ 1.84
SSBP4-209ENST00000601357 LBHD1Q9BQE6 289 aaPredicted RBP26.55■■□□□ 1.84
SSBP4-209ENST00000601357 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.54■■□□□ 1.84
SSBP4-209ENST00000601357 C6orf222P0C671 652 aaPredicted RBP26.54■■□□□ 1.84
SSBP4-209ENST00000601357 PTH1RQ03431 593 aa26.54■■□□□ 1.84
SSBP4-209ENST00000601357 NUP133Q8WUM0 1156 aa26.54■■□□□ 1.84
SSBP4-209ENST00000601357 TNFAIP2Q03169 654 aa26.53■■□□□ 1.84
SSBP4-209ENST00000601357 SH3RF1Q7Z6J0 888 aa26.53■■□□□ 1.84
SSBP4-209ENST00000601357 UBA5Q9GZZ9 404 aa26.53■■□□□ 1.84
SSBP4-209ENST00000601357 CPVLQ9H3G5 476 aa26.53■■□□□ 1.84
SSBP4-209ENST00000601357 GNEQ9Y223 722 aaKnown RBP26.53■■□□□ 1.84
SSBP4-209ENST00000601357 LOC102724159A0A0B4J2E5 919 aa26.52■■□□□ 1.84
SSBP4-209ENST00000601357 TRIM43BA6NCK2 446 aa26.52■■□□□ 1.84
SSBP4-209ENST00000601357 SGSM2O43147 1006 aa26.52■■□□□ 1.84
SSBP4-209ENST00000601357 CYP21A2P08686 494 aa26.52■■□□□ 1.84
SSBP4-209ENST00000601357 PWP2Q15269 919 aaKnown RBP26.52■■□□□ 1.84
SSBP4-209ENST00000601357 SEC23AQ15436 765 aa26.52■■□□□ 1.84
SSBP4-209ENST00000601357 ASPRV1Q53RT3 343 aa26.52■■□□□ 1.84
SSBP4-209ENST00000601357 TAPT1Q6NXT6 567 aa26.52■■□□□ 1.84
SSBP4-209ENST00000601357 SLC30A10Q6XR72 485 aa26.52■■□□□ 1.84
SSBP4-209ENST00000601357 ANKRD33Q7Z3H0 272 aa26.52■■□□□ 1.84
SSBP4-209ENST00000601357 PCSK9Q8NBP7 692 aaKnown RBP26.52■■□□□ 1.84
SSBP4-209ENST00000601357 TRIM43Q96BQ3 446 aaPredicted RBP26.52■■□□□ 1.84
SSBP4-209ENST00000601357 UBAC1Q9BSL1 405 aa26.52■■□□□ 1.84
SSBP4-209ENST00000601357 SPC25Q9HBM1 224 aa26.52■■□□□ 1.84
SSBP4-209ENST00000601357 PRDM5Q9NQX1 630 aaPredicted RBP26.52■■□□□ 1.84
SSBP4-209ENST00000601357 STARD7Q9NQZ5 370 aa26.52■■□□□ 1.84
SSBP4-209ENST00000601357 ADD3Q9UEY8 706 aaKnown RBP26.52■■□□□ 1.84
SSBP4-209ENST00000601357 ELP1O95163 1332 aa26.51■■□□□ 1.83
SSBP4-209ENST00000601357 ASGR1P07306 291 aa26.51■■□□□ 1.83
SSBP4-209ENST00000601357 ALDH5A1P51649 535 aaPredicted RBP26.51■■□□□ 1.83
SSBP4-209ENST00000601357 CYB5R4Q7L1T6 521 aa26.51■■□□□ 1.83
SSBP4-209ENST00000601357 VTA1Q9NP79 307 aa26.51■■□□□ 1.83
SSBP4-209ENST00000601357 PTPDC1A2A3K4 754 aa26.5■■□□□ 1.83
SSBP4-209ENST00000601357 GNASQ5JWF2 1037 aa26.5■■□□□ 1.83
SSBP4-209ENST00000601357 IQSEC1Q6DN90 963 aa26.5■■□□□ 1.83
SSBP4-209ENST00000601357 GPR153Q6NV75 609 aa26.5■■□□□ 1.83
SSBP4-209ENST00000601357 RNF207Q6ZRF8 634 aa26.5■■□□□ 1.83
SSBP4-209ENST00000601357 FBXO16Q8IX29 292 aaPredicted RBP26.5■■□□□ 1.83
SSBP4-209ENST00000601357 ADGRF4Q8IZF3 695 aa26.5■■□□□ 1.83
SSBP4-209ENST00000601357 TOX2Q96NM4 488 aa26.5■■□□□ 1.83
SSBP4-209ENST00000601357 PDGFCQ9NRA1 345 aa26.5■■□□□ 1.83
SSBP4-209ENST00000601357 CLTBP09497 229 aa26.49■■□□□ 1.83
SSBP4-209ENST00000601357 SMPD1P17405 629 aa26.49■■□□□ 1.83
SSBP4-209ENST00000601357 RPS6P62753 249 aaKnown RBP26.49■■□□□ 1.83
SSBP4-209ENST00000601357 CDC37Q16543 378 aaPredicted RBP26.49■■□□□ 1.83
SSBP4-209ENST00000601357 IFIT1BQ5T764 474 aaKnown RBP26.49■■□□□ 1.83
SSBP4-209ENST00000601357 EEPD1Q7L9B9 569 aa26.49■■□□□ 1.83
SSBP4-209ENST00000601357 RGS22Q8NE09 1264 aa26.49■■□□□ 1.83
SSBP4-209ENST00000601357 GLT1D1Q96MS3 346 aa26.49■■□□□ 1.83
SSBP4-209ENST00000601357 U3KPZ7 1027 aaPredicted RBP26.49■■□□□ 1.83
SSBP4-209ENST00000601357 KIAA0355O15063 1070 aa26.48■■□□□ 1.83
SSBP4-209ENST00000601357 PQBP1O60828 265 aaKnown RBP26.48■■□□□ 1.83
SSBP4-209ENST00000601357 PARP1P09874 1014 aaKnown RBP26.48■■□□□ 1.83
SSBP4-209ENST00000601357 ITGB8P26012 769 aa26.48■■□□□ 1.83
SSBP4-209ENST00000601357 CDK7P50613 346 aa26.48■■□□□ 1.83
SSBP4-209ENST00000601357 FAAP100Q0VG06 881 aa26.48■■□□□ 1.83
SSBP4-209ENST00000601357 TLK2Q86UE8 772 aa26.48■■□□□ 1.83
SSBP4-209ENST00000601357 BADQ92934 168 aa26.48■■□□□ 1.83
SSBP4-209ENST00000601357 MAF1Q9H063 256 aa26.48■■□□□ 1.83
SSBP4-209ENST00000601357 Q9Y3F1 56 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms