RNA–Protein interactions for RNA: ENST00000600944.5

CPT1C-223, Transcript of carnitine palmitoyltransferase 1C, human

TSL 2

Gene CPT1C, Length 1,027 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPT1C-223	ENST00000600944	SMPD1	P17405	629 aa		18.66	■□□□□ 0.58
CPT1C-223	ENST00000600944	RARS	P54136	660 aa	Known RBP	18.66	■□□□□ 0.58
CPT1C-223	ENST00000600944	PTCRA	Q6ISU1	281 aa	Predicted RBP	18.66	■□□□□ 0.58
CPT1C-223	ENST00000600944	TNN	Q9UQP3	1299 aa		18.66	■□□□□ 0.58
CPT1C-223	ENST00000600944	COG6	Q9Y2V7	657 aa		18.66	■□□□□ 0.58
CPT1C-223	ENST00000600944	TRANK1	O15050	2925 aa		18.66	■□□□□ 0.58
CPT1C-223	ENST00000600944	BRWD1	Q9NSI6	2320 aa		18.65	■□□□□ 0.58
CPT1C-223	ENST00000600944	ASB14	A6NK59	587 aa		18.65	■□□□□ 0.58
CPT1C-223	ENST00000600944	IPO8	O15397	1037 aa	Known RBP	18.65	■□□□□ 0.58
CPT1C-223	ENST00000600944	DCX	O43602	365 aa		18.65	■□□□□ 0.58
CPT1C-223	ENST00000600944	MBD4	O95243	580 aa		18.65	■□□□□ 0.58
CPT1C-223	ENST00000600944	NDUFB10	O96000	172 aa		18.65	■□□□□ 0.58
CPT1C-223	ENST00000600944	RFC2	P35250	354 aa		18.65	■□□□□ 0.58
CPT1C-223	ENST00000600944	C16orf86	Q6ZW13	317 aa		18.65	■□□□□ 0.58
CPT1C-223	ENST00000600944	FBXO16	Q8IX29	292 aa	Predicted RBP	18.65	■□□□□ 0.58
CPT1C-223	ENST00000600944	SSH3	Q8TE77	659 aa		18.65	■□□□□ 0.58
CPT1C-223	ENST00000600944	CRBN	Q96SW2	442 aa		18.65	■□□□□ 0.58
CPT1C-223	ENST00000600944	BCL11A	Q9H165	835 aa		18.65	■□□□□ 0.58
CPT1C-223	ENST00000600944	KCNH6	Q9H252	994 aa		18.65	■□□□□ 0.58
CPT1C-223	ENST00000600944	USP17L12	C9JPN9	530 aa		18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944	USP17L21	D6R901	530 aa		18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944		F5H6K3	240 aa		18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944	GOLIM4	O00461	696 aa		18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944	ATP2A1	O14983	1001 aa		18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944	MYL3	P08590	195 aa		18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944	TRIM27	P14373	513 aa		18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944	ATP8B2	P98198	1209 aa		18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944	KLRC3	Q07444	240 aa		18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944	LEXM	Q3ZCV2	418 aa		18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944	C12orf60	Q5U649	245 aa		18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944	STK11IP	Q8N1F8	1099 aa		18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944	ACAD9	Q9H845	621 aa		18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944	GPHN	Q9NQX3	736 aa	Predicted RBP	18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944	ATP8A2	Q9NTI2	1148 aa		18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944	DDX49	Q9Y6V7	483 aa	Known RBP	18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944	SCN5A	Q14524	2016 aa		18.64	■□□□□ 0.57
CPT1C-223	ENST00000600944	LCHN	A4D1U4	455 aa		18.63	■□□□□ 0.57
CPT1C-223	ENST00000600944	EP400NL	Q6ZTU2	488 aa		18.63	■□□□□ 0.57
CPT1C-223	ENST00000600944	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	18.63	■□□□□ 0.57
CPT1C-223	ENST00000600944	SLC38A10	Q9HBR0	1119 aa		18.63	■□□□□ 0.57
CPT1C-223	ENST00000600944	PDGFC	Q9NRA1	345 aa		18.63	■□□□□ 0.57
CPT1C-223	ENST00000600944	LMCD1	Q9NZU5	365 aa		18.63	■□□□□ 0.57
CPT1C-223	ENST00000600944	NOD1	Q9Y239	953 aa		18.63	■□□□□ 0.57
CPT1C-223	ENST00000600944	KIAA1211	Q6ZU35	1233 aa		18.62	■□□□□ 0.57
CPT1C-223	ENST00000600944	TMCO2	Q7Z6W1	182 aa	Predicted RBP	18.62	■□□□□ 0.57
CPT1C-223	ENST00000600944	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	18.62	■□□□□ 0.57
CPT1C-223	ENST00000600944	POLR3E	Q9NVU0	708 aa		18.62	■□□□□ 0.57
CPT1C-223	ENST00000600944	BAZ2A	Q9UIF9	1905 aa	Known RBP	18.62	■□□□□ 0.57
CPT1C-223	ENST00000600944	SOWAHB	A6NEL2	793 aa		18.61	■□□□□ 0.57
CPT1C-223	ENST00000600944	BAIAP3	O94812	1187 aa		18.61	■□□□□ 0.57
CPT1C-223	ENST00000600944	IQCF3	P0C7M6	154 aa		18.61	■□□□□ 0.57
CPT1C-223	ENST00000600944	CHMP4BP1	P59074	171 aa		18.61	■□□□□ 0.57
CPT1C-223	ENST00000600944	IK	Q13123	557 aa	Predicted RBP	18.61	■□□□□ 0.57
CPT1C-223	ENST00000600944	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	18.61	■□□□□ 0.57
CPT1C-223	ENST00000600944	FAM133A	Q8N9E0	248 aa		18.61	■□□□□ 0.57
CPT1C-223	ENST00000600944	PPP1R13L	Q8WUF5	828 aa		18.61	■□□□□ 0.57
CPT1C-223	ENST00000600944	RNF146	Q9NTX7	359 aa		18.61	■□□□□ 0.57
CPT1C-223	ENST00000600944	TCRBV5S4A2T	A0A5A2	114 aa		18.6	■□□□□ 0.57
CPT1C-223	ENST00000600944	BFSP2	Q13515	415 aa		18.6	■□□□□ 0.57
CPT1C-223	ENST00000600944	TMEM63B	Q5T3F8	832 aa		18.6	■□□□□ 0.57
CPT1C-223	ENST00000600944	IQSEC1	Q6DN90	963 aa		18.6	■□□□□ 0.57
CPT1C-223	ENST00000600944	TGS1	Q96RS0	853 aa	Known RBP	18.6	■□□□□ 0.57
CPT1C-223	ENST00000600944	MKNK2	Q9HBH9	465 aa		18.6	■□□□□ 0.57
CPT1C-223	ENST00000600944	A1CF	Q9NQ94	594 aa	Known RBP	18.6	■□□□□ 0.57
CPT1C-223	ENST00000600944	CLIP2	Q9UDT6	1046 aa		18.6	■□□□□ 0.57
CPT1C-223	ENST00000600944	FEM1B	Q9UK73	627 aa		18.6	■□□□□ 0.57
CPT1C-223	ENST00000600944	NOP58	Q9Y2X3	529 aa	Known RBP	18.6	■□□□□ 0.57
CPT1C-223	ENST00000600944		Q9Y3F1	56 aa		18.6	■□□□□ 0.57
CPT1C-223	ENST00000600944	SLC4A4	Q9Y6R1	1079 aa		18.6	■□□□□ 0.57
CPT1C-223	ENST00000600944	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	18.59	■□□□□ 0.57
CPT1C-223	ENST00000600944		H3BQ06	376 aa	Predicted RBP	18.59	■□□□□ 0.57
CPT1C-223	ENST00000600944	OAZ1	P54368	228 aa		18.59	■□□□□ 0.57
CPT1C-223	ENST00000600944	SLFNL1	Q499Z3	407 aa		18.59	■□□□□ 0.57
CPT1C-223	ENST00000600944	HFE2	Q6ZVN8	426 aa		18.59	■□□□□ 0.57
CPT1C-223	ENST00000600944	TMEM57	Q8N5G2	664 aa		18.59	■□□□□ 0.57
CPT1C-223	ENST00000600944	SUGCT	Q9HAC7	445 aa		18.59	■□□□□ 0.57
CPT1C-223	ENST00000600944	IL1RAPL2	Q9NP60	686 aa		18.59	■□□□□ 0.57
CPT1C-223	ENST00000600944	EXOC6B	Q9Y2D4	811 aa		18.59	■□□□□ 0.57
CPT1C-223	ENST00000600944	GRXCR2	A6NFK2	248 aa		18.58	■□□□□ 0.56
CPT1C-223	ENST00000600944	PITPNM1	O00562	1244 aa		18.58	■□□□□ 0.56
CPT1C-223	ENST00000600944	CPT1A	P50416	773 aa		18.58	■□□□□ 0.56
CPT1C-223	ENST00000600944	WDR5	P61964	334 aa	Known RBP	18.58	■□□□□ 0.56
CPT1C-223	ENST00000600944	PURA	Q00577	322 aa	Known RBP	18.58	■□□□□ 0.56
CPT1C-223	ENST00000600944	PUS10	Q3MIT2	529 aa	Known RBP	18.58	■□□□□ 0.56
CPT1C-223	ENST00000600944	FAM117B	Q6P1L5	589 aa		18.58	■□□□□ 0.56
CPT1C-223	ENST00000600944	ERC1	Q8IUD2	1116 aa		18.58	■□□□□ 0.56
CPT1C-223	ENST00000600944	LRRC47	Q8N1G4	583 aa	Known RBP	18.58	■□□□□ 0.56
CPT1C-223	ENST00000600944	ANKS1A	Q92625	1134 aa		18.58	■□□□□ 0.56
CPT1C-223	ENST00000600944	MFSD14A	Q96MC6	490 aa		18.58	■□□□□ 0.56
CPT1C-223	ENST00000600944	PHOX2B	Q99453	314 aa		18.58	■□□□□ 0.56
CPT1C-223	ENST00000600944	MTG1	Q9BT17	334 aa	Predicted RBP	18.58	■□□□□ 0.56
CPT1C-223	ENST00000600944	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	18.58	■□□□□ 0.56
CPT1C-223	ENST00000600944	NYAP2	Q9P242	653 aa		18.58	■□□□□ 0.56
CPT1C-223	ENST00000600944	ALAS1	P13196	640 aa		18.57	■□□□□ 0.56
CPT1C-223	ENST00000600944	DEFB103A	P81534	67 aa		18.57	■□□□□ 0.56
CPT1C-223	ENST00000600944	NBPF20	Q3BBV1	942 aa		18.57	■□□□□ 0.56
CPT1C-223	ENST00000600944	BRDT	Q58F21	947 aa	Predicted RBP	18.57	■□□□□ 0.56
CPT1C-223	ENST00000600944	TAPT1	Q6NXT6	567 aa		18.57	■□□□□ 0.56
CPT1C-223	ENST00000600944	TRMT2A	Q8IZ69	625 aa	Known RBP	18.57	■□□□□ 0.56
CPT1C-223	ENST00000600944	OR6J1	Q8NGC5	347 aa		18.57	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms