RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 PPP1R18Q6NYC8 613 aa23.55■■□□□ 1.36
PNKP-215ENST00000600910 CCDC12Q8WUD4 166 aaPredicted RBP23.55■■□□□ 1.36
PNKP-215ENST00000600910 HOMER2Q9NSB8 354 aa23.55■■□□□ 1.36
PNKP-215ENST00000600910 MORF4L1Q9UBU8 362 aa23.55■■□□□ 1.36
PNKP-215ENST00000600910 CPA4Q9UI42 421 aa23.55■■□□□ 1.36
PNKP-215ENST00000600910 KCNJ14Q9UNX9 436 aa23.55■■□□□ 1.36
PNKP-215ENST00000600910 PDCP20941 246 aa23.55■■□□□ 1.36
PNKP-215ENST00000600910 RIOX2Q8IUF8 465 aa23.55■■□□□ 1.36
PNKP-215ENST00000600910 GPRC5AQ8NFJ5 357 aa23.55■■□□□ 1.36
PNKP-215ENST00000600910 CCDC148Q8NFR7 591 aa23.55■■□□□ 1.36
PNKP-215ENST00000600910 MOV10L1Q9BXT6 1211 aaKnown RBP23.55■■□□□ 1.36
PNKP-215ENST00000600910 CEP350Q5VT06 3117 aa23.55■■□□□ 1.36
PNKP-215ENST00000600910 SYT1P21579 422 aa23.54■■□□□ 1.36
PNKP-215ENST00000600910 FAM110CQ1W6H9 321 aa23.54■■□□□ 1.36
PNKP-215ENST00000600910 KRT40Q6A162 431 aa23.54■■□□□ 1.36
PNKP-215ENST00000600910 FBXO18Q8NFZ0 1043 aa23.54■■□□□ 1.36
PNKP-215ENST00000600910 TRERF1Q96PN7 1200 aa23.54■■□□□ 1.36
PNKP-215ENST00000600910 PHF20Q9BVI0 1012 aa23.54■■□□□ 1.36
PNKP-215ENST00000600910 MRPL11Q9Y3B7 192 aaKnown RBP23.54■■□□□ 1.36
PNKP-215ENST00000600910 SMCO2A6NFE2 343 aa23.53■■□□□ 1.36
PNKP-215ENST00000600910 NLRP5P59047 1200 aa23.53■■□□□ 1.36
PNKP-215ENST00000600910 MUM1L1Q5H9M0 696 aa23.53■■□□□ 1.36
PNKP-215ENST00000600910 RNF146Q9NTX7 359 aa23.53■■□□□ 1.36
PNKP-215ENST00000600910 H3BQV1 296 aa23.52■■□□□ 1.36
PNKP-215ENST00000600910 OPLAHO14841 1288 aa23.52■■□□□ 1.36
PNKP-215ENST00000600910 BCRP11274 1271 aa23.52■■□□□ 1.36
PNKP-215ENST00000600910 TKFCQ3LXA3 575 aa23.52■■□□□ 1.36
PNKP-215ENST00000600910 IFFO2Q5TF58 517 aa23.52■■□□□ 1.36
PNKP-215ENST00000600910 C17orf99Q6UX52 265 aa23.52■■□□□ 1.36
PNKP-215ENST00000600910 FAM177A1Q8N128 213 aaPredicted RBP23.52■■□□□ 1.36
PNKP-215ENST00000600910 CLEC4DQ8WXI8 215 aa23.52■■□□□ 1.36
PNKP-215ENST00000600910 ZMYND12Q9H0C1 365 aa23.52■■□□□ 1.36
PNKP-215ENST00000600910 RNF186Q9NXI6 227 aa23.52■■□□□ 1.36
PNKP-215ENST00000600910 ESYT2A0FGR8 921 aa23.51■■□□□ 1.35
PNKP-215ENST00000600910 TRPA1O75762 1119 aa23.51■■□□□ 1.35
PNKP-215ENST00000600910 SLC25A27O95847 323 aa23.51■■□□□ 1.35
PNKP-215ENST00000600910 MMP1P03956 469 aa23.51■■□□□ 1.35
PNKP-215ENST00000600910 CCNA1P78396 465 aa23.51■■□□□ 1.35
PNKP-215ENST00000600910 NCAPG2Q86XI2 1143 aa23.51■■□□□ 1.35
PNKP-215ENST00000600910 R3HDMLQ9H3Y0 253 aa23.51■■□□□ 1.35
PNKP-215ENST00000600910 VPS37CA5D8V6 355 aaPredicted RBP23.51■■□□□ 1.35
PNKP-215ENST00000600910 NFIBO00712 420 aa23.51■■□□□ 1.35
PNKP-215ENST00000600910 STX6O43752 255 aa23.51■■□□□ 1.35
PNKP-215ENST00000600910 ERCC3P19447 782 aa23.51■■□□□ 1.35
PNKP-215ENST00000600910 DDIT3P35638 169 aa23.51■■□□□ 1.35
PNKP-215ENST00000600910 ADCY7P51828 1080 aa23.51■■□□□ 1.35
PNKP-215ENST00000600910 DNAJC5GQ8N7S2 189 aa23.51■■□□□ 1.35
PNKP-215ENST00000600910 PORCNQ9H237 461 aa23.51■■□□□ 1.35
PNKP-215ENST00000600910 PSTPIP2Q9H939 334 aa23.51■■□□□ 1.35
PNKP-215ENST00000600910 C6orf50Q9HD87 102 aa23.51■■□□□ 1.35
PNKP-215ENST00000600910 TBC1D8O95759 1140 aa23.5■■□□□ 1.35
PNKP-215ENST00000600910 CALML3P27482 149 aa23.5■■□□□ 1.35
PNKP-215ENST00000600910 GNA11P29992 359 aa23.5■■□□□ 1.35
PNKP-215ENST00000600910 NPY5RQ15761 445 aa23.5■■□□□ 1.35
PNKP-215ENST00000600910 CHST13Q8NET6 341 aa23.5■■□□□ 1.35
PNKP-215ENST00000600910 CUL5Q93034 780 aa23.5■■□□□ 1.35
PNKP-215ENST00000600910 ACAD9Q9H845 621 aa23.5■■□□□ 1.35
PNKP-215ENST00000600910 RIC8AQ9NPQ8 531 aa23.5■■□□□ 1.35
PNKP-215ENST00000600910 ADAMTS3O15072 1205 aa23.49■■□□□ 1.35
PNKP-215ENST00000600910 COPB2P35606 906 aa23.49■■□□□ 1.35
PNKP-215ENST00000600910 PKP1Q13835 747 aa23.49■■□□□ 1.35
PNKP-215ENST00000600910 RGS22Q8NE09 1264 aa23.49■■□□□ 1.35
PNKP-215ENST00000600910 SHCBP1Q8NEM2 672 aa23.49■■□□□ 1.35
PNKP-215ENST00000600910 CFHR5Q9BXR6 569 aa23.49■■□□□ 1.35
PNKP-215ENST00000600910 EFCC1Q9HA90 598 aa23.49■■□□□ 1.35
PNKP-215ENST00000600910 PCDHA4Q9UN74 947 aa23.49■■□□□ 1.35
PNKP-215ENST00000600910 CFBP00751 764 aa23.48■■□□□ 1.35
PNKP-215ENST00000600910 MRPL12P52815 198 aaKnown RBP23.48■■□□□ 1.35
PNKP-215ENST00000600910 GALNT17Q6IS24 598 aa23.48■■□□□ 1.35
PNKP-215ENST00000600910 MCF2L2Q86YR7 1114 aa23.48■■□□□ 1.35
PNKP-215ENST00000600910 TBC1D5Q92609 795 aa23.48■■□□□ 1.35
PNKP-215ENST00000600910 MROH8Q9H579 483 aa23.48■■□□□ 1.35
PNKP-215ENST00000600910 FBXO40Q9UH90 709 aa23.48■■□□□ 1.35
PNKP-215ENST00000600910 MTMR6Q9Y217 621 aa23.48■■□□□ 1.35
PNKP-215ENST00000600910 MAP2K1Q02750 393 aaPredicted RBP23.48■■□□□ 1.35
PNKP-215ENST00000600910 SAFBQ15424 915 aaKnown RBP eCLIP23.48■■□□□ 1.35
PNKP-215ENST00000600910 WDR78Q5VTH9 848 aa23.48■■□□□ 1.35
PNKP-215ENST00000600910 CCAR1Q8IX12 1150 aaKnown RBP23.48■■□□□ 1.35
PNKP-215ENST00000600910 DIS3L2Q8IYB7 885 aaKnown RBP23.48■■□□□ 1.35
PNKP-215ENST00000600910 BLIDQ8IZY5 108 aa23.48■■□□□ 1.35
PNKP-215ENST00000600910 DAGLBQ8NCG7 672 aa23.48■■□□□ 1.35
PNKP-215ENST00000600910 OXER1Q8TDS5 423 aa23.48■■□□□ 1.35
PNKP-215ENST00000600910 GLT8D2Q9H1C3 349 aa23.48■■□□□ 1.35
PNKP-215ENST00000600910 BRMS1Q9HCU9 246 aa23.48■■□□□ 1.35
PNKP-215ENST00000600910 MEIS2O14770 477 aa23.47■■□□□ 1.35
PNKP-215ENST00000600910 PDIA4P13667 645 aaKnown RBP23.47■■□□□ 1.35
PNKP-215ENST00000600910 KRT2P35908 639 aa23.47■■□□□ 1.35
PNKP-215ENST00000600910 UBE2SQ16763 222 aa23.47■■□□□ 1.35
PNKP-215ENST00000600910 USP17L6PQ6QN14 398 aa23.47■■□□□ 1.35
PNKP-215ENST00000600910 NSMFQ6X4W1 530 aa23.47■■□□□ 1.35
PNKP-215ENST00000600910 BICD2Q8TD16 824 aa23.47■■□□□ 1.35
PNKP-215ENST00000600910 RBBP6Q7Z6E9 1792 aaKnown RBP23.46■■□□□ 1.35
PNKP-215ENST00000600910 BTBD18B2RXH4 712 aa23.46■■□□□ 1.35
PNKP-215ENST00000600910 MCTP1Q6DN14 999 aa23.46■■□□□ 1.35
PNKP-215ENST00000600910 GCOM1H8Y6P7 765 aaPredicted RBP23.45■■□□□ 1.34
PNKP-215ENST00000600910 POLR2MP0CAP2 368 aa23.45■■□□□ 1.34
PNKP-215ENST00000600910 HOXA13P31271 388 aaPredicted RBP23.45■■□□□ 1.34
PNKP-215ENST00000600910 HSD17B4P51659 736 aa23.45■■□□□ 1.34
PNKP-215ENST00000600910 NR5A1Q13285 461 aa23.45■■□□□ 1.34
PNKP-215ENST00000600910 RNF207Q6ZRF8 634 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms