RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 PPP1R11O60927 126 aaPredicted RBP18.38■□□□□ 0.53
RPS28-203ENST00000600659 SNAI1O95863 264 aaPredicted RBP18.38■□□□□ 0.53
RPS28-203ENST00000600659 ZNF865P0CJ78 1059 aaPredicted RBP18.38■□□□□ 0.53
RPS28-203ENST00000600659 LIFRP42702 1097 aa18.38■□□□□ 0.53
RPS28-203ENST00000600659 QRICH1Q2TAL8 776 aa18.38■□□□□ 0.53
RPS28-203ENST00000600659 ZNF654Q8IZM8 581 aa18.38■□□□□ 0.53
RPS28-203ENST00000600659 DIS3LQ8TF46 1054 aaKnown RBP18.38■□□□□ 0.53
RPS28-203ENST00000600659 NEK1Q96PY6 1258 aa18.38■□□□□ 0.53
RPS28-203ENST00000600659 KATNBL1Q9H079 304 aa18.38■□□□□ 0.53
RPS28-203ENST00000600659 SYNGAP1Q96PV0 1343 aa18.37■□□□□ 0.53
RPS28-203ENST00000600659 MSL3Q8N5Y2 521 aaKnown RBP18.37■□□□□ 0.53
RPS28-203ENST00000600659 TCEANC2Q96MN5 208 aa18.37■□□□□ 0.53
RPS28-203ENST00000600659 PURBQ96QR8 312 aaKnown RBP18.37■□□□□ 0.53
RPS28-203ENST00000600659 MAP3K14Q99558 947 aa18.37■□□□□ 0.53
RPS28-203ENST00000600659 RIOX1Q9H6W3 641 aa18.37■□□□□ 0.53
RPS28-203ENST00000600659 DDX20Q9UHI6 824 aaKnown RBP18.37■□□□□ 0.53
RPS28-203ENST00000600659 NRBP1Q9UHY1 535 aa18.37■□□□□ 0.53
RPS28-203ENST00000600659 PFASO15067 1338 aa18.36■□□□□ 0.53
RPS28-203ENST00000600659 EPB41L2O43491 1005 aaKnown RBP18.36■□□□□ 0.53
RPS28-203ENST00000600659 DDAH1O94760 285 aa18.36■□□□□ 0.53
RPS28-203ENST00000600659 FARP2O94887 1054 aaPredicted RBP18.36■□□□□ 0.53
RPS28-203ENST00000600659 REC8O95072 547 aa18.36■□□□□ 0.53
RPS28-203ENST00000600659 CPA1P15085 419 aa18.36■□□□□ 0.53
RPS28-203ENST00000600659 SLC30A10Q6XR72 485 aa18.36■□□□□ 0.53
RPS28-203ENST00000600659 SGMS1Q86VZ5 419 aa18.36■□□□□ 0.53
RPS28-203ENST00000600659 USP26Q9BXU7 913 aa18.36■□□□□ 0.53
RPS28-203ENST00000600659 DDX49Q9Y6V7 483 aaKnown RBP18.36■□□□□ 0.53
RPS28-203ENST00000600659 POTEB2H3BUK9 544 aa18.35■□□□□ 0.53
RPS28-203ENST00000600659 OPLAHO14841 1288 aa18.35■□□□□ 0.53
RPS28-203ENST00000600659 SEPT4O43236 478 aa18.35■□□□□ 0.53
RPS28-203ENST00000600659 TFRCP02786 760 aaKnown RBP18.35■□□□□ 0.53
RPS28-203ENST00000600659 CAPN2P17655 700 aa18.35■□□□□ 0.53
RPS28-203ENST00000600659 USH1GQ495M9 461 aa18.35■□□□□ 0.53
RPS28-203ENST00000600659 NSMFQ6X4W1 530 aa18.35■□□□□ 0.53
RPS28-203ENST00000600659 DHX32Q7L7V1 743 aaKnown RBP18.35■□□□□ 0.53
RPS28-203ENST00000600659 CATIPQ7Z7H3 387 aa18.35■□□□□ 0.53
RPS28-203ENST00000600659 ANKLE1Q8NAG6 615 aa18.35■□□□□ 0.53
RPS28-203ENST00000600659 ADCY6O43306 1168 aa18.34■□□□□ 0.53
RPS28-203ENST00000600659 RXRAP19793 462 aa18.34■□□□□ 0.53
RPS28-203ENST00000600659 BAATQ14032 418 aaPredicted RBP18.34■□□□□ 0.53
RPS28-203ENST00000600659 KRT32Q14532 448 aa18.34■□□□□ 0.53
RPS28-203ENST00000600659 ARMCX2Q7L311 632 aa18.34■□□□□ 0.53
RPS28-203ENST00000600659 CCDC144CPQ8IYA2 1237 aa18.34■□□□□ 0.53
RPS28-203ENST00000600659 VAT1LQ9HCJ6 419 aa18.34■□□□□ 0.53
RPS28-203ENST00000600659 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.34■□□□□ 0.53
RPS28-203ENST00000600659 PNMA2Q9UL42 364 aa18.34■□□□□ 0.53
RPS28-203ENST00000600659 COL6A1P12109 1028 aa18.33■□□□□ 0.53
RPS28-203ENST00000600659 CNGA1P29973 690 aa18.33■□□□□ 0.53
RPS28-203ENST00000600659 RPS6P62753 249 aaKnown RBP18.33■□□□□ 0.53
RPS28-203ENST00000600659 ANO1Q5XXA6 986 aa18.33■□□□□ 0.53
RPS28-203ENST00000600659 RAB11FIP4Q86YS3 637 aa18.33■□□□□ 0.53
RPS28-203ENST00000600659 MORC4Q8TE76 937 aa18.33■□□□□ 0.53
RPS28-203ENST00000600659 NUP133Q8WUM0 1156 aa18.33■□□□□ 0.53
RPS28-203ENST00000600659 TBC1D5Q92609 795 aa18.33■□□□□ 0.53
RPS28-203ENST00000600659 LENG1Q96BZ8 264 aaPredicted RBP18.33■□□□□ 0.53
RPS28-203ENST00000600659 PAWRQ96IZ0 340 aaKnown RBP18.33■□□□□ 0.53
RPS28-203ENST00000600659 PIGSQ96S52 555 aa18.33■□□□□ 0.53
RPS28-203ENST00000600659 BRPF3Q9ULD4 1205 aa18.33■□□□□ 0.53
RPS28-203ENST00000600659 ABCB11O95342 1321 aa18.32■□□□□ 0.52
RPS28-203ENST00000600659 ZBTB5O15062 677 aa18.32■□□□□ 0.52
RPS28-203ENST00000600659 CEP290O15078 2479 aa18.32■□□□□ 0.52
RPS28-203ENST00000600659 MSCO60682 206 aa18.32■□□□□ 0.52
RPS28-203ENST00000600659 PLEKHA8P1O95397 391 aa18.32■□□□□ 0.52
RPS28-203ENST00000600659 GHRHRQ02643 423 aa18.32■□□□□ 0.52
RPS28-203ENST00000600659 APOA5Q6Q788 366 aa18.32■□□□□ 0.52
RPS28-203ENST00000600659 FBXO11Q86XK2 927 aa18.32■□□□□ 0.52
RPS28-203ENST00000600659 TMTC2Q8N394 836 aa18.32■□□□□ 0.52
RPS28-203ENST00000600659 JAKMIP1Q96N16 626 aaKnown RBP18.32■□□□□ 0.52
RPS28-203ENST00000600659 AGXT2Q9BYV1 514 aa18.32■□□□□ 0.52
RPS28-203ENST00000600659 CCDC69A6NI79 296 aa18.31■□□□□ 0.52
RPS28-203ENST00000600659 DHX16O60231 1041 aaKnown RBP18.31■□□□□ 0.52
RPS28-203ENST00000600659 ALDH5A1P51649 535 aaPredicted RBP18.31■□□□□ 0.52
RPS28-203ENST00000600659 SRBD1Q8N5C6 995 aaKnown RBP18.31■□□□□ 0.52
RPS28-203ENST00000600659 RGS22Q8NE09 1264 aa18.31■□□□□ 0.52
RPS28-203ENST00000600659 SPZ1Q9BXG8 430 aa18.31■□□□□ 0.52
RPS28-203ENST00000600659 COL20A1Q9P218 1284 aa18.31■□□□□ 0.52
RPS28-203ENST00000600659 KIAA1217Q5T5P2 1943 aa18.31■□□□□ 0.52
RPS28-203ENST00000600659 DNAH12Q6ZR08 3092 aa18.31■□□□□ 0.52
RPS28-203ENST00000600659 PTPDC1A2A3K4 754 aa18.3■□□□□ 0.52
RPS28-203ENST00000600659 ACVR2BQ13705 512 aa18.3■□□□□ 0.52
RPS28-203ENST00000600659 NFXL1Q6ZNB6 911 aa18.3■□□□□ 0.52
RPS28-203ENST00000600659 RNF207Q6ZRF8 634 aa18.3■□□□□ 0.52
RPS28-203ENST00000600659 MICU3Q86XE3 530 aa18.3■□□□□ 0.52
RPS28-203ENST00000600659 HOMER1Q86YM7 354 aa18.3■□□□□ 0.52
RPS28-203ENST00000600659 FBXL16Q8N461 479 aa18.3■□□□□ 0.52
RPS28-203ENST00000600659 CTCFLQ8NI51 663 aaPredicted RBP18.3■□□□□ 0.52
RPS28-203ENST00000600659 AMNQ9BXJ7 453 aa18.3■□□□□ 0.52
RPS28-203ENST00000600659 ABHD16BQ9H3Z7 469 aa18.3■□□□□ 0.52
RPS28-203ENST00000600659 CNPY2Q9Y2B0 182 aa18.3■□□□□ 0.52
RPS28-203ENST00000600659 SLC12A7Q9Y666 1083 aa18.3■□□□□ 0.52
RPS28-203ENST00000600659 ADAMTS4O75173 837 aa18.29■□□□□ 0.52
RPS28-203ENST00000600659 HMGB1P09429 215 aaKnown RBP18.29■□□□□ 0.52
RPS28-203ENST00000600659 AKR1A1P14550 325 aa18.29■□□□□ 0.52
RPS28-203ENST00000600659 RPS6KB1P23443 525 aa18.29■□□□□ 0.52
RPS28-203ENST00000600659 EDNRBP24530 442 aa18.29■□□□□ 0.52
RPS28-203ENST00000600659 SMARCA1P28370 1054 aa18.29■□□□□ 0.52
RPS28-203ENST00000600659 TMTC3Q6ZXV5 915 aa18.29■□□□□ 0.52
RPS28-203ENST00000600659 CMTR1Q8N1G2 835 aaKnown RBP18.29■□□□□ 0.52
RPS28-203ENST00000600659 FAM217BQ9NTX9 383 aaPredicted RBP18.29■□□□□ 0.52
RPS28-203ENST00000600659 ZHX1Q9UKY1 873 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms