RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 SH2B2O14492 632 aaPredicted RBP10.27□□□□□ -0.77
SSBP4-208ENST00000600628 IFIT3O14879 490 aaKnown RBP10.27□□□□□ -0.77
SSBP4-208ENST00000600628 MSCO60682 206 aa10.27□□□□□ -0.77
SSBP4-208ENST00000600628 PARP1P09874 1014 aaKnown RBP10.27□□□□□ -0.77
SSBP4-208ENST00000600628 GOLGA8HP0CJ92 632 aa10.27□□□□□ -0.77
SSBP4-208ENST00000600628 TAL1P17542 331 aaPredicted RBP10.27□□□□□ -0.77
SSBP4-208ENST00000600628 SMARCA1P28370 1054 aa10.27□□□□□ -0.77
SSBP4-208ENST00000600628 MCM5P33992 734 aa10.27□□□□□ -0.77
SSBP4-208ENST00000600628 CNTN2Q02246 1040 aa10.27□□□□□ -0.77
SSBP4-208ENST00000600628 ADCK5Q3MIX3 580 aa10.27□□□□□ -0.77
SSBP4-208ENST00000600628 CHST3Q7LGC8 479 aa10.27□□□□□ -0.77
SSBP4-208ENST00000600628 RALYLQ86SE5 291 aaKnown RBP10.27□□□□□ -0.77
SSBP4-208ENST00000600628 IL17RAQ96F46 866 aa10.27□□□□□ -0.77
SSBP4-208ENST00000600628 HTATIP2Q9BUP3 242 aa10.27□□□□□ -0.77
SSBP4-208ENST00000600628 DDX20Q9UHI6 824 aaKnown RBP10.27□□□□□ -0.77
SSBP4-208ENST00000600628 CCPG1Q9ULG6 757 aa10.27□□□□□ -0.77
SSBP4-208ENST00000600628 KLRF2D3W0D1 207 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 ADCY6O43306 1168 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 PRC1O43663 620 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 PPP1R11O60927 126 aaPredicted RBP10.26□□□□□ -0.77
SSBP4-208ENST00000600628 ALAS1P13196 640 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 EDNRBP24530 442 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 IKQ13123 557 aaPredicted RBP10.26□□□□□ -0.77
SSBP4-208ENST00000600628 WTAPQ15007 396 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 SART3Q15020 963 aaKnown RBP10.26□□□□□ -0.77
SSBP4-208ENST00000600628 QRICH1Q2TAL8 776 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 TMEM67Q5HYA8 995 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 PRAMEF19Q5SWL8 479 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 RNF20Q5VTR2 975 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 CCDC174Q6PII3 467 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 CASC1Q6TDU7 716 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 NECAB2Q7Z6G3 386 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 TMTC2Q8N394 836 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 DIS3LQ8TF46 1054 aaKnown RBP10.26□□□□□ -0.77
SSBP4-208ENST00000600628 DPF3Q92784 378 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 CHMP4CQ96CF2 233 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 PAWRQ96IZ0 340 aaKnown RBP10.26□□□□□ -0.77
SSBP4-208ENST00000600628 SPZ1Q9BXG8 430 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 USP26Q9BXU7 913 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 UBA5Q9GZZ9 404 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 CTDP1Q9Y5B0 961 aaPredicted RBP10.26□□□□□ -0.77
SSBP4-208ENST00000600628 KIAA1217Q5T5P2 1943 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 NID2Q14112 1375 aa10.26□□□□□ -0.77
SSBP4-208ENST00000600628 ZBTB5O15062 677 aa10.25□□□□□ -0.77
SSBP4-208ENST00000600628 DDAH1O94760 285 aa10.25□□□□□ -0.77
SSBP4-208ENST00000600628 FUT2Q10981 343 aa10.25□□□□□ -0.77
SSBP4-208ENST00000600628 CDC37Q16543 378 aaPredicted RBP10.25□□□□□ -0.77
SSBP4-208ENST00000600628 CCSAPQ6IQ19 270 aaPredicted RBP10.25□□□□□ -0.77
SSBP4-208ENST00000600628 DHX32Q7L7V1 743 aaKnown RBP10.25□□□□□ -0.77
SSBP4-208ENST00000600628 ZNF654Q8IZM8 581 aa10.25□□□□□ -0.77
SSBP4-208ENST00000600628 ANKRD35Q8N283 1001 aa10.25□□□□□ -0.77
SSBP4-208ENST00000600628 DDX11Q96FC9 970 aa10.25□□□□□ -0.77
SSBP4-208ENST00000600628 NEK1Q96PY6 1258 aa10.25□□□□□ -0.77
SSBP4-208ENST00000600628 ABHD16BQ9H3Z7 469 aa10.25□□□□□ -0.77
SSBP4-208ENST00000600628 HOMER2Q9NSB8 354 aa10.25□□□□□ -0.77
SSBP4-208ENST00000600628 MTMR7Q9Y216 660 aa10.25□□□□□ -0.77
SSBP4-208ENST00000600628 SNX14Q9Y5W7 946 aa10.25□□□□□ -0.77
SSBP4-208ENST00000600628 RBM47A0AV96 593 aaKnown RBP10.24□□□□□ -0.77
SSBP4-208ENST00000600628 H0YGN5 161 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 POTEB2H3BUK9 544 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 CTAGE5O15320 804 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 ADAMTS4O75173 837 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 REC8O95072 547 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 CNGA1P29973 690 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 SLC4A3P48751 1232 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 HSD17B4P51659 736 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 RCAN1P53805 252 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 EVCP57679 992 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 RPS6P62753 249 aaKnown RBP10.24□□□□□ -0.77
SSBP4-208ENST00000600628 BAATQ14032 418 aaPredicted RBP10.24□□□□□ -0.77
SSBP4-208ENST00000600628 KRT32Q14532 448 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 SNX17Q15036 470 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 C1orf53Q5VUE5 145 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 TAPT1Q6NXT6 567 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 ARMCX2Q7L311 632 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 CCDC144CPQ8IYA2 1237 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 SAMD3Q8N6K7 520 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 KLHDC9Q8NEP7 349 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 DNERQ8NFT8 737 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 UPF3AQ9H1J1 476 aaKnown RBP10.24□□□□□ -0.77
SSBP4-208ENST00000600628 FAM217BQ9NTX9 383 aaPredicted RBP10.24□□□□□ -0.77
SSBP4-208ENST00000600628 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.24□□□□□ -0.77
SSBP4-208ENST00000600628 ISY1Q9ULR0 285 aaKnown RBP10.24□□□□□ -0.77
SSBP4-208ENST00000600628 ABCB11O95342 1321 aa10.24□□□□□ -0.77
SSBP4-208ENST00000600628 ERICH2A1L162 156 aa10.23□□□□□ -0.77
SSBP4-208ENST00000600628 ASB14A6NK59 587 aa10.23□□□□□ -0.77
SSBP4-208ENST00000600628 DNM1LO00429 736 aa10.23□□□□□ -0.77
SSBP4-208ENST00000600628 HMGB1P09429 215 aaKnown RBP10.23□□□□□ -0.77
SSBP4-208ENST00000600628 CST5P28325 142 aaPredicted RBP10.23□□□□□ -0.77
SSBP4-208ENST00000600628 ACVR2BQ13705 512 aa10.23□□□□□ -0.77
SSBP4-208ENST00000600628 APOA5Q6Q788 366 aa10.23□□□□□ -0.77
SSBP4-208ENST00000600628 SLC30A10Q6XR72 485 aa10.23□□□□□ -0.77
SSBP4-208ENST00000600628 CATIPQ7Z7H3 387 aa10.23□□□□□ -0.77
SSBP4-208ENST00000600628 TBC1D5Q92609 795 aa10.23□□□□□ -0.77
SSBP4-208ENST00000600628 PURBQ96QR8 312 aaKnown RBP10.23□□□□□ -0.77
SSBP4-208ENST00000600628 PRO3102Q9H379 93 aa10.23□□□□□ -0.77
SSBP4-208ENST00000600628 C11orf49Q9H6J7 331 aa10.23□□□□□ -0.77
SSBP4-208ENST00000600628 MAP3K20Q9NYL2 800 aaKnown RBP10.23□□□□□ -0.77
SSBP4-208ENST00000600628 COL20A1Q9P218 1284 aa10.23□□□□□ -0.77
SSBP4-208ENST00000600628 GNEQ9Y223 722 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms