RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 CRY2Q49AN0 593 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 FBXO38Q6PIJ6 1188 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 USP17L6PQ6QN14 398 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 KRT25Q7Z3Z0 450 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 SH3RF1Q7Z6J0 888 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 CSGALNACT2Q8N6G5 542 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 TEKT1Q969V4 418 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 CCDC47Q96A33 483 aaKnown RBP12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 CALML4Q96GE6 196 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 MTMR4Q9NYA4 1195 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■■■□ 19.6
ARHGEF1-220ENST00000600274 PDS5AQ29RF7 1337 aaKnown RBP12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 BTAF1O14981 1849 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 A0A1B0GTH6 734 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 PSMA7O14818 248 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 MCM6Q14566 821 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 ZYXQ15942 572 aaKnown RBP12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 ENOX2Q16206 610 aaKnown RBP12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 TSR1Q2NL82 804 aaKnown RBP12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 ZNF569Q5MCW4 686 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 RAD9BQ6WBX8 426 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 REXO1L1PQ8IX06 675 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 ERO1AQ96HE7 468 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 ADD3Q9UEY8 706 aaKnown RBP12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 FAM170AA1A519 330 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 B4DLN1 442 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 CCDC175P0C221 793 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 KIF4BQ2VIQ3 1234 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 NAALADL2Q58DX5 795 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 ZNF658Q5TYW1 1059 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 CDC42EP5Q6NZY7 148 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 TRMT1LQ7Z2T5 733 aaKnown RBP12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 SNX29Q8TEQ0 813 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 TANGO6Q9C0B7 1094 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 OGFRQ9NZT2 677 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 TIAM2Q8IVF5 1701 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 ARAP2Q8WZ64 1704 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 SLC37A4O43826 429 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 C2CD5Q86YS7 1000 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 C4orf32Q8N8J7 132 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 CTAGE1Q96RT6 745 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 RNF225M0QZC1 329 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 TRIM21P19474 475 aaKnown RBP12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 ARL6IP4Q66PJ3 421 aaKnown RBP12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 ADGRF4Q8IZF3 695 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 LRRC15Q8TF66 581 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 ATP6V0A2Q9Y487 856 aa12.94□□□□□ -0.34
ARHGEF1-220ENST00000600274 TNRC6CQ9HCJ0 1690 aaKnown RBP12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 STX10O60499 249 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 GYPCP04921 128 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 SLC1A4P43007 532 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 KLK7P49862 253 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 STK4Q13043 487 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 TCP11X2Q5H9J9 407 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 RGS22Q8NE09 1264 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 SPATA20Q8TB22 786 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 GUCA1BQ9UMX6 200 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 ECM29Q5VYK3 1845 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 BCORQ6W2J9 1755 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 TTLL1O95922 423 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 ANKRD7Q92527 254 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 COA1Q9GZY4 146 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 CLRN2A0PK11 232 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 FANCGO15287 622 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 ABL1P00519 1130 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 SRGNP10124 158 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 CRKP46108 304 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 TMEM266Q2M3C6 531 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 TMEM139Q8IV31 216 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 SP8Q8IXZ3 490 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 KRT222Q8N1A0 295 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 ZMYND12Q9H0C1 365 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 TDRD3Q9H7E2 651 aaKnown RBP12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 SH3GLB2Q9NR46 395 aa12.93□□□□□ -0.34
ARHGEF1-220ENST00000600274 WNK3Q9BYP7 1800 aa12.92□□□□□ -0.34
ARHGEF1-220ENST00000600274 KRT18P05783 430 aaKnown RBP12.92□□□□□ -0.34
ARHGEF1-220ENST00000600274 AOC3Q16853 763 aa12.92□□□□□ -0.34
ARHGEF1-220ENST00000600274 CHP1Q99653 195 aa12.92□□□□□ -0.34
ARHGEF1-220ENST00000600274 LZTS2Q9BRK4 669 aa12.92□□□□□ -0.34
ARHGEF1-220ENST00000600274 KANSL2Q9H9L4 492 aa12.92□□□□□ -0.34
ARHGEF1-220ENST00000600274 RWDD2AQ9UIY3 292 aa12.92□□□□□ -0.34
ARHGEF1-220ENST00000600274 KIF5CO60282 957 aa12.92□□□□□ -0.34
ARHGEF1-220ENST00000600274 MFAP3LO75121 409 aa12.92□□□□□ -0.34
ARHGEF1-220ENST00000600274 TRIM65Q6PJ69 517 aa12.92□□□□□ -0.34
ARHGEF1-220ENST00000600274 NLGN1Q8N2Q7 840 aa12.92□□□□□ -0.34
ARHGEF1-220ENST00000600274 CRAMP1Q96RY5 1269 aa12.92□□□□□ -0.34
ARHGEF1-220ENST00000600274 NUDT12Q9BQG2 462 aa12.92□□□□□ -0.34
ARHGEF1-220ENST00000600274 SPZ1Q9BXG8 430 aa12.92□□□□□ -0.34
ARHGEF1-220ENST00000600274 PPP1R1BQ9UD71 204 aaPredicted RBP12.92□□□□□ -0.34
ARHGEF1-220ENST00000600274 TNNT3P45378 269 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 TBX2Q13207 712 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 SEPT2Q15019 361 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 SLC30A10Q6XR72 485 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 NELFCDQ8IXH7 590 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 CERKQ8TCT0 537 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 PYM1Q9BRP8 204 aaKnown RBP12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 TRIM10Q9UDY6 481 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 SEC31AO94979 1220 aaKnown RBP12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 TBC1D8BQ0IIM8 1120 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 CDKAL1Q5VV42 579 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms