RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 ESR2Q92731 530 aa13.46□□□□□ -0.25
HIF3A-217ENST00000600236 TMEM47Q9BQJ4 181 aa13.46□□□□□ -0.25
HIF3A-217ENST00000600236 UPF3AQ9H1J1 476 aaKnown RBP13.46□□□□□ -0.25
HIF3A-217ENST00000600236 RANBP17Q9H2T7 1088 aaKnown RBP13.46□□□□□ -0.25
HIF3A-217ENST00000600236 OSBPL3Q9H4L5 887 aa13.46□□□□□ -0.25
HIF3A-217ENST00000600236 MTMR10Q9NXD2 777 aa13.46□□□□□ -0.25
HIF3A-217ENST00000600236 ADD3Q9UEY8 706 aaKnown RBP13.46□□□□□ -0.25
HIF3A-217ENST00000600236 MYH4Q9Y623 1939 aa13.46□□□□□ -0.25
HIF3A-217ENST00000600236 MYADML2A6NDP7 307 aa13.45□□□□□ -0.26
HIF3A-217ENST00000600236 ZNF213O14771 459 aa13.45□□□□□ -0.26
HIF3A-217ENST00000600236 TLR3O15455 904 aaKnown RBP13.45□□□□□ -0.26
HIF3A-217ENST00000600236 SNAP25P60880 206 aa13.45□□□□□ -0.26
HIF3A-217ENST00000600236 NUCB1Q02818 461 aa13.45□□□□□ -0.26
HIF3A-217ENST00000600236 FPGSQ05932 587 aa13.45□□□□□ -0.26
HIF3A-217ENST00000600236 CCSAPQ6IQ19 270 aaPredicted RBP13.45□□□□□ -0.26
HIF3A-217ENST00000600236 MPHOSPH6Q99547 160 aaKnown RBP13.45□□□□□ -0.26
HIF3A-217ENST00000600236 AP5M1Q9H0R1 490 aa13.45□□□□□ -0.26
HIF3A-217ENST00000600236 CYP39A1Q9NYL5 469 aa13.45□□□□□ -0.26
HIF3A-217ENST00000600236 FRMPD2Q68DX3 1309 aaPredicted RBP13.44□□□□□ -0.26
HIF3A-217ENST00000600236 LOC102724159A0A0B4J2E5 919 aa13.44□□□□□ -0.26
HIF3A-217ENST00000600236 SOWAHBA6NEL2 793 aa13.44□□□□□ -0.26
HIF3A-217ENST00000600236 CABYRO75952 493 aa13.44□□□□□ -0.26
HIF3A-217ENST00000600236 PDHBP11177 359 aa13.44□□□□□ -0.26
HIF3A-217ENST00000600236 SLC16A2P36021 539 aa13.44□□□□□ -0.26
HIF3A-217ENST00000600236 FAAP100Q0VG06 881 aa13.44□□□□□ -0.26
HIF3A-217ENST00000600236 PWP2Q15269 919 aaKnown RBP13.44□□□□□ -0.26
HIF3A-217ENST00000600236 MUM1L1Q5H9M0 696 aa13.44□□□□□ -0.26
HIF3A-217ENST00000600236 C9orf50Q5SZB4 431 aa13.44□□□□□ -0.26
HIF3A-217ENST00000600236 RASGRP2Q7LDG7 609 aa13.44□□□□□ -0.26
HIF3A-217ENST00000600236 TLK2Q86UE8 772 aa13.44□□□□□ -0.26
HIF3A-217ENST00000600236 IQCA1Q86XH1 822 aa13.44□□□□□ -0.26
HIF3A-217ENST00000600236 PLEKHM2Q8IWE5 1019 aa13.44□□□□□ -0.26
HIF3A-217ENST00000600236 RNPC3Q96LT9 517 aaKnown RBP13.44□□□□□ -0.26
HIF3A-217ENST00000600236 KATNBL1Q9H079 304 aa13.44□□□□□ -0.26
HIF3A-217ENST00000600236 VTA1Q9NP79 307 aa13.44□□□□□ -0.26
HIF3A-217ENST00000600236 GPCPD1Q9NPB8 672 aa13.44□□□□□ -0.26
HIF3A-217ENST00000600236 PLXNA1Q9UIW2 1896 aa13.44□□□□□ -0.26
HIF3A-217ENST00000600236 PTPDC1A2A3K4 754 aa13.43□□□□□ -0.26
HIF3A-217ENST00000600236 ARVCFO00192 962 aa13.43□□□□□ -0.26
HIF3A-217ENST00000600236 ADCY6O43306 1168 aa13.43□□□□□ -0.26
HIF3A-217ENST00000600236 NKX3-2P78367 333 aa13.43□□□□□ -0.26
HIF3A-217ENST00000600236 SMAD3P84022 425 aaKnown RBP13.43□□□□□ -0.26
HIF3A-217ENST00000600236 GPATCH4Q5T3I0 446 aaKnown RBP13.43□□□□□ -0.26
HIF3A-217ENST00000600236 IQSEC1Q6DN90 963 aa13.43□□□□□ -0.26
HIF3A-217ENST00000600236 TTBK2Q6IQ55 1244 aa13.43□□□□□ -0.26
HIF3A-217ENST00000600236 CWC27Q6UX04 472 aaKnown RBP13.43□□□□□ -0.26
HIF3A-217ENST00000600236 DGKHQ86XP1 1220 aa13.43□□□□□ -0.26
HIF3A-217ENST00000600236 TBC1D10CQ8IV04 446 aa13.43□□□□□ -0.26
HIF3A-217ENST00000600236 SEZ6LQ9BYH1 1024 aa13.43□□□□□ -0.26
HIF3A-217ENST00000600236 Q9Y3F1 56 aa13.43□□□□□ -0.26
HIF3A-217ENST00000600236 LTBP2Q14767 1821 aa13.42□□□□□ -0.26
HIF3A-217ENST00000600236 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.42□□□□□ -0.26
HIF3A-217ENST00000600236 B4DLN1 442 aa13.42□□□□□ -0.26
HIF3A-217ENST00000600236 TIMP1P01033 207 aa13.42□□□□□ -0.26
HIF3A-217ENST00000600236 IGHDP01880 384 aa13.42□□□□□ -0.26
HIF3A-217ENST00000600236 ITGB8P26012 769 aa13.42□□□□□ -0.26
HIF3A-217ENST00000600236 MRPL12P52815 198 aaKnown RBP13.42□□□□□ -0.26
HIF3A-217ENST00000600236 ZNF543Q08ER8 600 aa13.42□□□□□ -0.26
HIF3A-217ENST00000600236 PPIGQ13427 754 aaKnown RBP eCLIP13.42□□□□□ -0.26
HIF3A-217ENST00000600236 BAATQ14032 418 aaPredicted RBP13.42□□□□□ -0.26
HIF3A-217ENST00000600236 FSCN1Q16658 493 aaKnown RBP13.42□□□□□ -0.26
HIF3A-217ENST00000600236 IMMTQ16891 758 aaKnown RBP13.42□□□□□ -0.26
HIF3A-217ENST00000600236 EEPD1Q7L9B9 569 aa13.42□□□□□ -0.26
HIF3A-217ENST00000600236 FBXO16Q8IX29 292 aaPredicted RBP13.42□□□□□ -0.26
HIF3A-217ENST00000600236 TMEM199Q8N511 208 aa13.42□□□□□ -0.26
HIF3A-217ENST00000600236 EXOC6Q8TAG9 804 aa13.42□□□□□ -0.26
HIF3A-217ENST00000600236 CTNNA3Q9UI47 895 aa13.42□□□□□ -0.26
HIF3A-217ENST00000600236 GNEQ9Y223 722 aaKnown RBP13.42□□□□□ -0.26
HIF3A-217ENST00000600236 ZNFX1Q9P2E3 1918 aaKnown RBP13.42□□□□□ -0.26
HIF3A-217ENST00000600236 NEDD4P46934 1319 aa13.41□□□□□ -0.26
HIF3A-217ENST00000600236 WDR19Q8NEZ3 1342 aa13.41□□□□□ -0.26
HIF3A-217ENST00000600236 DYNC1LI2O43237 492 aaPredicted RBP13.41□□□□□ -0.26
HIF3A-217ENST00000600236 SNHG28P0DPA3 235 aa13.41□□□□□ -0.26
HIF3A-217ENST00000600236 SMPD1P17405 629 aa13.41□□□□□ -0.26
HIF3A-217ENST00000600236 CALML3P27482 149 aa13.41□□□□□ -0.26
HIF3A-217ENST00000600236 CDK7P50613 346 aa13.41□□□□□ -0.26
HIF3A-217ENST00000600236 ALDH5A1P51649 535 aaPredicted RBP13.41□□□□□ -0.26
HIF3A-217ENST00000600236 BEX3Q00994 111 aa13.41□□□□□ -0.26
HIF3A-217ENST00000600236 MFSD5Q6N075 450 aa13.41□□□□□ -0.26
HIF3A-217ENST00000600236 RNF207Q6ZRF8 634 aa13.41□□□□□ -0.26
HIF3A-217ENST00000600236 KIAA1211Q6ZU35 1233 aa13.41□□□□□ -0.26
HIF3A-217ENST00000600236 MORC4Q8TE76 937 aa13.41□□□□□ -0.26
HIF3A-217ENST00000600236 FAM161BQ96MY7 647 aa13.41□□□□□ -0.26
HIF3A-217ENST00000600236 DSCC1Q9BVC3 393 aa13.41□□□□□ -0.26
HIF3A-217ENST00000600236 KAT14Q9H8E8 782 aa13.41□□□□□ -0.26
HIF3A-217ENST00000600236 TBX21Q9UL17 535 aa13.41□□□□□ -0.26
HIF3A-217ENST00000600236 TMEM265A0A087WTH1 108 aa13.4□□□□□ -0.26
HIF3A-217ENST00000600236 NFIBO00712 420 aa13.4□□□□□ -0.26
HIF3A-217ENST00000600236 CTAGE5O15320 804 aa13.4□□□□□ -0.26
HIF3A-217ENST00000600236 KDM4AO75164 1064 aa13.4□□□□□ -0.26
HIF3A-217ENST00000600236 IRX5P78411 483 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-217ENST00000600236 BRDTQ58F21 947 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-217ENST00000600236 CXCL17Q6UXB2 119 aa13.4□□□□□ -0.26
HIF3A-217ENST00000600236 FAM126BQ8IXS8 530 aa13.4□□□□□ -0.26
HIF3A-217ENST00000600236 ZKSCAN3Q9BRR0 538 aa13.4□□□□□ -0.26
HIF3A-217ENST00000600236 KRT23Q9C075 422 aa13.4□□□□□ -0.26
HIF3A-217ENST00000600236 RAD50Q92878 1312 aa13.39□□□□□ -0.27
HIF3A-217ENST00000600236 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-217ENST00000600236 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-217ENST00000600236 PDE4DQ08499 809 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms