RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 NRBP1Q9UHY1 535 aa32.81■■■□□ 2.84
SSBP4-206ENST00000599699 PLXNA1Q9UIW2 1896 aa32.81■■■□□ 2.84
SSBP4-206ENST00000599699 SYNGAP1Q96PV0 1343 aa32.8■■■□□ 2.84
SSBP4-206ENST00000599699 TNRC18O15417 2968 aaPredicted RBP32.8■■■□□ 2.84
SSBP4-206ENST00000599699 PTPDC1A2A3K4 754 aa32.8■■■□□ 2.84
SSBP4-206ENST00000599699 SEPT4O43236 478 aa32.8■■■□□ 2.84
SSBP4-206ENST00000599699 DDAH1O94760 285 aa32.8■■■□□ 2.84
SSBP4-206ENST00000599699 HSPA4P34932 840 aa32.8■■■□□ 2.84
SSBP4-206ENST00000599699 CTCFLQ8NI51 663 aaPredicted RBP32.8■■■□□ 2.84
SSBP4-206ENST00000599699 LIFRP42702 1097 aa32.79■■■□□ 2.84
SSBP4-206ENST00000599699 BAATQ14032 418 aaPredicted RBP32.79■■■□□ 2.84
SSBP4-206ENST00000599699 MAMDC4Q6UXC1 1216 aa32.79■■■□□ 2.84
SSBP4-206ENST00000599699 DHX32Q7L7V1 743 aaKnown RBP32.79■■■□□ 2.84
SSBP4-206ENST00000599699 FBXO11Q86XK2 927 aa32.79■■■□□ 2.84
SSBP4-206ENST00000599699 CLEC4DQ8WXI8 215 aa32.79■■■□□ 2.84
SSBP4-206ENST00000599699 FGD4Q96M96 766 aa32.79■■■□□ 2.84
SSBP4-206ENST00000599699 MKI67P46013 3256 aaKnown RBP32.78■■■□□ 2.84
SSBP4-206ENST00000599699 KIF5BP33176 963 aa32.78■■■□□ 2.84
SSBP4-206ENST00000599699 ANO1Q5XXA6 986 aa32.78■■■□□ 2.84
SSBP4-206ENST00000599699 UBE2Q1Q7Z7E8 422 aa32.78■■■□□ 2.84
SSBP4-206ENST00000599699 PAWRQ96IZ0 340 aaKnown RBP32.78■■■□□ 2.84
SSBP4-206ENST00000599699 TCEANC2Q96MN5 208 aa32.78■■■□□ 2.84
SSBP4-206ENST00000599699 ZHX1Q9UKY1 873 aaPredicted RBP32.78■■■□□ 2.84
SSBP4-206ENST00000599699 SLC12A7Q9Y666 1083 aa32.78■■■□□ 2.84
SSBP4-206ENST00000599699 ABCB11O95342 1321 aa32.77■■■□□ 2.84
SSBP4-206ENST00000599699 SOWAHBA6NEL2 793 aa32.77■■■□□ 2.84
SSBP4-206ENST00000599699 HMGB1P09429 215 aaKnown RBP32.77■■■□□ 2.84
SSBP4-206ENST00000599699 RNF207Q6ZRF8 634 aa32.77■■■□□ 2.84
SSBP4-206ENST00000599699 ARMCX2Q7L311 632 aa32.77■■■□□ 2.84
SSBP4-206ENST00000599699 NECAB2Q7Z6G3 386 aa32.77■■■□□ 2.84
SSBP4-206ENST00000599699 HOMER1Q86YM7 354 aa32.77■■■□□ 2.84
SSBP4-206ENST00000599699 DIS3LQ8TF46 1054 aaKnown RBP32.77■■■□□ 2.84
SSBP4-206ENST00000599699 CDKN2AIPQ9NXV6 580 aaPredicted RBP32.77■■■□□ 2.84
SSBP4-206ENST00000599699 SNX14Q9Y5W7 946 aa32.77■■■□□ 2.84
SSBP4-206ENST00000599699 SNAI1O95863 264 aaPredicted RBP32.76■■■□□ 2.83
SSBP4-206ENST00000599699 CALML3P27482 149 aa32.76■■■□□ 2.83
SSBP4-206ENST00000599699 CCDC144CPQ8IYA2 1237 aa32.76■■■□□ 2.83
SSBP4-206ENST00000599699 KCNB2Q92953 911 aa32.76■■■□□ 2.83
SSBP4-206ENST00000599699 JAKMIP1Q96N16 626 aaKnown RBP32.76■■■□□ 2.83
SSBP4-206ENST00000599699 MAP3K14Q99558 947 aa32.76■■■□□ 2.83
SSBP4-206ENST00000599699 ASB14A6NK59 587 aa32.75■■■□□ 2.83
SSBP4-206ENST00000599699 ZBTB5O15062 677 aa32.75■■■□□ 2.83
SSBP4-206ENST00000599699 CALM1P0DP23 149 aa32.75■■■□□ 2.83
SSBP4-206ENST00000599699 CALM2P0DP24 149 aa32.75■■■□□ 2.83
SSBP4-206ENST00000599699 CALM3P0DP25 149 aa32.75■■■□□ 2.83
SSBP4-206ENST00000599699 FGD1P98174 961 aa32.75■■■□□ 2.83
SSBP4-206ENST00000599699 EXOSC10Q01780 885 aaKnown RBP32.75■■■□□ 2.83
SSBP4-206ENST00000599699 SLC30A10Q6XR72 485 aa32.75■■■□□ 2.83
SSBP4-206ENST00000599699 SYNE3Q6ZMZ3 975 aa32.75■■■□□ 2.83
SSBP4-206ENST00000599699 PURBQ96QR8 312 aaKnown RBP32.75■■■□□ 2.83
SSBP4-206ENST00000599699 HTATIP2Q9BUP3 242 aa32.75■■■□□ 2.83
SSBP4-206ENST00000599699 AMNQ9BXJ7 453 aa32.75■■■□□ 2.83
SSBP4-206ENST00000599699 SMCHD1A6NHR9 2005 aa32.75■■■□□ 2.83
SSBP4-206ENST00000599699 ZNF865P0CJ78 1059 aaPredicted RBP32.74■■■□□ 2.83
SSBP4-206ENST00000599699 RAB11FIP4Q86YS3 637 aa32.74■■■□□ 2.83
SSBP4-206ENST00000599699 RIOX1Q9H6W3 641 aa32.74■■■□□ 2.83
SSBP4-206ENST00000599699 MRPL11Q9Y3B7 192 aaKnown RBP32.74■■■□□ 2.83
SSBP4-206ENST00000599699 MYCNP04198 464 aaPredicted RBP32.73■■■□□ 2.83
SSBP4-206ENST00000599699 RXRAP19793 462 aa32.73■■■□□ 2.83
SSBP4-206ENST00000599699 ACVR2BQ13705 512 aa32.73■■■□□ 2.83
SSBP4-206ENST00000599699 PIBF1Q8WXW3 757 aa32.73■■■□□ 2.83
SSBP4-206ENST00000599699 MTMR8Q96EF0 704 aa32.73■■■□□ 2.83
SSBP4-206ENST00000599699 PIGSQ96S52 555 aa32.73■■■□□ 2.83
SSBP4-206ENST00000599699 ABHD16BQ9H3Z7 469 aa32.73■■■□□ 2.83
SSBP4-206ENST00000599699 ADD3Q9UEY8 706 aaKnown RBP32.73■■■□□ 2.83
SSBP4-206ENST00000599699 EPB41L2O43491 1005 aaKnown RBP32.72■■■□□ 2.83
SSBP4-206ENST00000599699 RARBP10826 455 aa32.72■■■□□ 2.83
SSBP4-206ENST00000599699 AKR1A1P14550 325 aa32.72■■■□□ 2.83
SSBP4-206ENST00000599699 RPS6P62753 249 aaKnown RBP32.72■■■□□ 2.83
SSBP4-206ENST00000599699 SLC35G1Q2M3R5 365 aa32.72■■■□□ 2.83
SSBP4-206ENST00000599699 SGMS1Q86VZ5 419 aa32.72■■■□□ 2.83
SSBP4-206ENST00000599699 DPF3Q92784 378 aa32.72■■■□□ 2.83
SSBP4-206ENST00000599699 C11orf49Q9H6J7 331 aa32.72■■■□□ 2.83
SSBP4-206ENST00000599699 FAM184BQ9ULE4 1060 aa32.72■■■□□ 2.83
SSBP4-206ENST00000599699 PDE4DIPQ5VU43 2346 aa32.72■■■□□ 2.83
SSBP4-206ENST00000599699 CPA1P15085 419 aa32.71■■■□□ 2.83
SSBP4-206ENST00000599699 GNAQP50148 359 aa32.71■■■□□ 2.83
SSBP4-206ENST00000599699 MNX1P50219 401 aaPredicted RBP32.71■■■□□ 2.83
SSBP4-206ENST00000599699 BLOC1S2Q6QNY1 142 aa32.71■■■□□ 2.83
SSBP4-206ENST00000599699 MICU3Q86XE3 530 aa32.71■■■□□ 2.83
SSBP4-206ENST00000599699 MCF2L2Q86YR7 1114 aa32.71■■■□□ 2.83
SSBP4-206ENST00000599699 ARRDC4Q8NCT1 418 aa32.71■■■□□ 2.83
SSBP4-206ENST00000599699 LZTS2Q9BRK4 669 aa32.71■■■□□ 2.83
SSBP4-206ENST00000599699 USP26Q9BXU7 913 aa32.71■■■□□ 2.83
SSBP4-206ENST00000599699 PCDHA1Q9Y5I3 950 aa32.71■■■□□ 2.83
SSBP4-206ENST00000599699 CYTH3O43739 400 aa32.7■■■□□ 2.83
SSBP4-206ENST00000599699 PSMA5P28066 241 aa32.7■■■□□ 2.83
SSBP4-206ENST00000599699 RGS22Q8NE09 1264 aa32.7■■■□□ 2.83
SSBP4-206ENST00000599699 ASTN1O14525 1302 aa32.7■■■□□ 2.82
SSBP4-206ENST00000599699 PNMA6FA0A0J9YX94 578 aa32.69■■■□□ 2.82
SSBP4-206ENST00000599699 PPP1R11O60927 126 aaPredicted RBP32.69■■■□□ 2.82
SSBP4-206ENST00000599699 TRAF1Q13077 416 aa32.69■■■□□ 2.82
SSBP4-206ENST00000599699 XPNPEP3Q9NQH7 507 aa32.69■■■□□ 2.82
SSBP4-206ENST00000599699 DDX49Q9Y6V7 483 aaKnown RBP32.69■■■□□ 2.82
SSBP4-206ENST00000599699 ALDH5A1P51649 535 aaPredicted RBP32.68■■■□□ 2.82
SSBP4-206ENST00000599699 GJC2Q5T442 439 aaPredicted RBP32.68■■■□□ 2.82
SSBP4-206ENST00000599699 FANCBQ8NB91 859 aa32.68■■■□□ 2.82
SSBP4-206ENST00000599699 RRP36Q96EU6 259 aaKnown RBP32.68■■■□□ 2.82
SSBP4-206ENST00000599699 SPZ1Q9BXG8 430 aa32.68■■■□□ 2.82
SSBP4-206ENST00000599699 NAP1L2Q9ULW6 460 aaPredicted RBP32.68■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms