RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 PPIGQ13427 754 aaKnown RBP eCLIP17.24■□□□□ 0.35
EBI3-202ENST00000599339 RRP12Q5JTH9 1297 aaKnown RBP17.24■□□□□ 0.35
EBI3-202ENST00000599339 MFSD5Q6N075 450 aa17.24■□□□□ 0.35
EBI3-202ENST00000599339 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.24■□□□□ 0.35
EBI3-202ENST00000599339 AP5M1Q9H0R1 490 aa17.24■□□□□ 0.35
EBI3-202ENST00000599339 PNMA2Q9UL42 364 aa17.24■□□□□ 0.35
EBI3-202ENST00000599339 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.23■□□□□ 0.35
EBI3-202ENST00000599339 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.23■□□□□ 0.35
EBI3-202ENST00000599339 FGAP02671 866 aa17.23■□□□□ 0.35
EBI3-202ENST00000599339 TOP1P11387 765 aaKnown RBP17.23■□□□□ 0.35
EBI3-202ENST00000599339 PCP11498 1178 aaKnown RBP17.23■□□□□ 0.35
EBI3-202ENST00000599339 SNAP25P60880 206 aa17.23■□□□□ 0.35
EBI3-202ENST00000599339 AAMPQ13685 434 aa17.23■□□□□ 0.35
EBI3-202ENST00000599339 NSMFQ6X4W1 530 aa17.23■□□□□ 0.35
EBI3-202ENST00000599339 TLK2Q86UE8 772 aa17.23■□□□□ 0.35
EBI3-202ENST00000599339 TMEM199Q8N511 208 aa17.23■□□□□ 0.35
EBI3-202ENST00000599339 SEZ6LQ9BYH1 1024 aa17.23■□□□□ 0.35
EBI3-202ENST00000599339 TCP11L1Q9NUJ3 509 aa17.23■□□□□ 0.35
EBI3-202ENST00000599339 CYP39A1Q9NYL5 469 aa17.23■□□□□ 0.35
EBI3-202ENST00000599339 ADD3Q9UEY8 706 aaKnown RBP17.23■□□□□ 0.35
EBI3-202ENST00000599339 ZMYM6O95789 1325 aa17.22■□□□□ 0.35
EBI3-202ENST00000599339 A0A0D9SFI3 127 aa17.22■□□□□ 0.35
EBI3-202ENST00000599339 TRIM6-TRIM34B2RNG4 842 aa17.22■□□□□ 0.35
EBI3-202ENST00000599339 MFAP1P55081 439 aaKnown RBP17.22■□□□□ 0.35
EBI3-202ENST00000599339 IRX5P78411 483 aaPredicted RBP17.22■□□□□ 0.35
EBI3-202ENST00000599339 BEX3Q00994 111 aa17.22■□□□□ 0.35
EBI3-202ENST00000599339 FSCN1Q16658 493 aaKnown RBP17.22■□□□□ 0.35
EBI3-202ENST00000599339 MUM1L1Q5H9M0 696 aa17.22■□□□□ 0.35
EBI3-202ENST00000599339 IQSEC1Q6DN90 963 aa17.22■□□□□ 0.35
EBI3-202ENST00000599339 BTNL9Q6UXG8 535 aa17.22■□□□□ 0.35
EBI3-202ENST00000599339 FAM227BQ96M60 508 aa17.22■□□□□ 0.35
EBI3-202ENST00000599339 RANBP17Q9H2T7 1088 aaKnown RBP17.22■□□□□ 0.35
EBI3-202ENST00000599339 VTA1Q9NP79 307 aa17.22■□□□□ 0.35
EBI3-202ENST00000599339 GNEQ9Y223 722 aaKnown RBP17.22■□□□□ 0.35
EBI3-202ENST00000599339 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.21■□□□□ 0.35
EBI3-202ENST00000599339 CTAGE5O15320 804 aa17.21■□□□□ 0.35
EBI3-202ENST00000599339 HSPD1P10809 573 aaKnown RBP17.21■□□□□ 0.35
EBI3-202ENST00000599339 SYDE2Q5VT97 1194 aa17.21■□□□□ 0.35
EBI3-202ENST00000599339 RASGRP2Q7LDG7 609 aa17.21■□□□□ 0.35
EBI3-202ENST00000599339 FAM126BQ8IXS8 530 aa17.21■□□□□ 0.35
EBI3-202ENST00000599339 MAFAQ8NHW3 353 aaPredicted RBP17.21■□□□□ 0.35
EBI3-202ENST00000599339 TMEM47Q9BQJ4 181 aa17.21■□□□□ 0.35
EBI3-202ENST00000599339 TTYH1Q9H313 450 aaPredicted RBP17.21■□□□□ 0.35
EBI3-202ENST00000599339 Q9Y3F1 56 aa17.21■□□□□ 0.35
EBI3-202ENST00000599339 CCDC171Q6TFL3 1326 aa17.21■□□□□ 0.34
EBI3-202ENST00000599339 LOC102724159A0A0B4J2E5 919 aa17.2■□□□□ 0.34
EBI3-202ENST00000599339 DYNC1LI2O43237 492 aaPredicted RBP17.2■□□□□ 0.34
EBI3-202ENST00000599339 FOSL2P15408 326 aa17.2■□□□□ 0.34
EBI3-202ENST00000599339 SMPD1P17405 629 aa17.2■□□□□ 0.34
EBI3-202ENST00000599339 SLC16A2P36021 539 aa17.2■□□□□ 0.34
EBI3-202ENST00000599339 NMIQ13287 307 aaPredicted RBP17.2■□□□□ 0.34
EBI3-202ENST00000599339 PWP2Q15269 919 aaKnown RBP17.2■□□□□ 0.34
EBI3-202ENST00000599339 TTBK2Q6IQ55 1244 aa17.2■□□□□ 0.34
EBI3-202ENST00000599339 PSRC1Q6PGN9 363 aaPredicted RBP17.2■□□□□ 0.34
EBI3-202ENST00000599339 CXCL17Q6UXB2 119 aa17.2■□□□□ 0.34
EBI3-202ENST00000599339 MFSD6Q6ZSS7 791 aa17.2■□□□□ 0.34
EBI3-202ENST00000599339 EEPD1Q7L9B9 569 aa17.2■□□□□ 0.34
EBI3-202ENST00000599339 FBXO16Q8IX29 292 aaPredicted RBP17.2■□□□□ 0.34
EBI3-202ENST00000599339 MYLIPQ8WY64 445 aa17.2■□□□□ 0.34
EBI3-202ENST00000599339 TTC14Q96N46 770 aa17.2■□□□□ 0.34
EBI3-202ENST00000599339 MPHOSPH6Q99547 160 aaKnown RBP17.2■□□□□ 0.34
EBI3-202ENST00000599339 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.2■□□□□ 0.34
EBI3-202ENST00000599339 PPP1R12CQ9BZL4 782 aa17.2■□□□□ 0.34
EBI3-202ENST00000599339 RNF41Q9H4P4 317 aaPredicted RBP17.2■□□□□ 0.34
EBI3-202ENST00000599339 ASTN1O14525 1302 aa17.2■□□□□ 0.34
EBI3-202ENST00000599339 LRRC37A2A6NM11 1700 aa17.19■□□□□ 0.34
EBI3-202ENST00000599339 PTPDC1A2A3K4 754 aa17.19■□□□□ 0.34
EBI3-202ENST00000599339 DNAJB2P25686 324 aa17.19■□□□□ 0.34
EBI3-202ENST00000599339 ITGA7Q13683 1181 aa17.19■□□□□ 0.34
EBI3-202ENST00000599339 BAATQ14032 418 aaPredicted RBP17.19■□□□□ 0.34
EBI3-202ENST00000599339 AKNAD1Q5T1N1 836 aa17.19■□□□□ 0.34
EBI3-202ENST00000599339 TAPT1Q6NXT6 567 aa17.19■□□□□ 0.34
EBI3-202ENST00000599339 KIAA1211Q6ZU35 1233 aa17.19■□□□□ 0.34
EBI3-202ENST00000599339 MORC4Q8TE76 937 aa17.19■□□□□ 0.34
EBI3-202ENST00000599339 RILPL2Q969X0 211 aa17.19■□□□□ 0.34
EBI3-202ENST00000599339 LNPKQ9C0E8 428 aa17.19■□□□□ 0.34
EBI3-202ENST00000599339 MTIF3Q9H2K0 278 aaKnown RBP17.19■□□□□ 0.34
EBI3-202ENST00000599339 RWDD1Q9H446 243 aaPredicted RBP17.19■□□□□ 0.34
EBI3-202ENST00000599339 GPCPD1Q9NPB8 672 aa17.19■□□□□ 0.34
EBI3-202ENST00000599339 FRMPD2Q68DX3 1309 aaPredicted RBP17.19■□□□□ 0.34
EBI3-202ENST00000599339 PDHBP11177 359 aa17.18■□□□□ 0.34
EBI3-202ENST00000599339 CSF2RAP15509 400 aa17.18■□□□□ 0.34
EBI3-202ENST00000599339 NT5C2P49902 561 aa17.18■□□□□ 0.34
EBI3-202ENST00000599339 ALDH5A1P51649 535 aaPredicted RBP17.18■□□□□ 0.34
EBI3-202ENST00000599339 HAND2P61296 217 aa17.18■□□□□ 0.34
EBI3-202ENST00000599339 ZNF589Q86UQ0 364 aaPredicted RBP17.18■□□□□ 0.34
EBI3-202ENST00000599339 SLC43A3Q8NBI5 491 aa17.18■□□□□ 0.34
EBI3-202ENST00000599339 ESR2Q92731 530 aa17.18■□□□□ 0.34
EBI3-202ENST00000599339 PDGFCQ9NRA1 345 aa17.18■□□□□ 0.34
EBI3-202ENST00000599339 CD4P01730 458 aa17.17■□□□□ 0.34
EBI3-202ENST00000599339 DUSP28Q4G0W2 176 aa17.17■□□□□ 0.34
EBI3-202ENST00000599339 TMEM240Q5SV17 173 aa17.17■□□□□ 0.34
EBI3-202ENST00000599339 HIPK3Q9H422 1215 aa17.17■□□□□ 0.34
EBI3-202ENST00000599339 DDX49Q9Y6V7 483 aaKnown RBP17.17■□□□□ 0.34
EBI3-202ENST00000599339 B4DLN1 442 aa17.16■□□□□ 0.34
EBI3-202ENST00000599339 NFIBO00712 420 aa17.16■□□□□ 0.34
EBI3-202ENST00000599339 SDSP20132 328 aa17.16■□□□□ 0.34
EBI3-202ENST00000599339 CALML3P27482 149 aa17.16■□□□□ 0.34
EBI3-202ENST00000599339 MRPL12P52815 198 aaKnown RBP17.16■□□□□ 0.34
EBI3-202ENST00000599339 ZNF543Q08ER8 600 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms