RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 DNAJC25-GNG10A0A024R161 153 aa14.04□□□□□ -0.16
ZNF548-209ENST00000598895 POTEB2H3BUK9 544 aa14.04□□□□□ -0.16
ZNF548-209ENST00000598895 CYBAP13498 195 aa14.04□□□□□ -0.16
ZNF548-209ENST00000598895 HSPA4P34932 840 aa14.04□□□□□ -0.16
ZNF548-209ENST00000598895 QRICH1Q2TAL8 776 aa14.04□□□□□ -0.16
ZNF548-209ENST00000598895 HOMER1Q86YM7 354 aa14.04□□□□□ -0.16
ZNF548-209ENST00000598895 TMEM87BQ96K49 555 aa14.04□□□□□ -0.16
ZNF548-209ENST00000598895 JAKMIP1Q96N16 626 aaKnown RBP14.04□□□□□ -0.16
ZNF548-209ENST00000598895 TINF2Q9BSI4 451 aa14.04□□□□□ -0.16
ZNF548-209ENST00000598895 SNX14Q9Y5W7 946 aa14.04□□□□□ -0.16
ZNF548-209ENST00000598895 PTPDC1A2A3K4 754 aa14.03□□□□□ -0.16
ZNF548-209ENST00000598895 PALM3A6NDB9 673 aaPredicted RBP14.03□□□□□ -0.16
ZNF548-209ENST00000598895 SOWAHBA6NEL2 793 aa14.03□□□□□ -0.16
ZNF548-209ENST00000598895 FARP2O94887 1054 aaPredicted RBP14.03□□□□□ -0.16
ZNF548-209ENST00000598895 IGHA2P01877 340 aa14.03□□□□□ -0.16
ZNF548-209ENST00000598895 MYCNP04198 464 aaPredicted RBP14.03□□□□□ -0.16
ZNF548-209ENST00000598895 CALML3P27482 149 aa14.03□□□□□ -0.16
ZNF548-209ENST00000598895 TROAPQ12815 778 aa14.03□□□□□ -0.16
ZNF548-209ENST00000598895 SLC35G1Q2M3R5 365 aa14.03□□□□□ -0.16
ZNF548-209ENST00000598895 SLC30A10Q6XR72 485 aa14.03□□□□□ -0.16
ZNF548-209ENST00000598895 DIS3LQ8TF46 1054 aaKnown RBP14.03□□□□□ -0.16
ZNF548-209ENST00000598895 CLEC4DQ8WXI8 215 aa14.03□□□□□ -0.16
ZNF548-209ENST00000598895 FGD4Q96M96 766 aa14.03□□□□□ -0.16
ZNF548-209ENST00000598895 CRISPLD2Q9H0B8 497 aa14.03□□□□□ -0.16
ZNF548-209ENST00000598895 CYP39A1Q9NYL5 469 aa14.03□□□□□ -0.16
ZNF548-209ENST00000598895 DDX20Q9UHI6 824 aaKnown RBP14.03□□□□□ -0.16
ZNF548-209ENST00000598895 DIS3Q9Y2L1 958 aaKnown RBP14.03□□□□□ -0.16
ZNF548-209ENST00000598895 MCM3APO60318 1980 aa14.03□□□□□ -0.16
ZNF548-209ENST00000598895 KIAA0100Q14667 2235 aaKnown RBP14.03□□□□□ -0.16
ZNF548-209ENST00000598895 PFASO15067 1338 aa14.02□□□□□ -0.17
ZNF548-209ENST00000598895 WDR19Q8NEZ3 1342 aa14.02□□□□□ -0.17
ZNF548-209ENST00000598895 BAATQ14032 418 aaPredicted RBP14.02□□□□□ -0.17
ZNF548-209ENST00000598895 KRT32Q14532 448 aa14.02□□□□□ -0.17
ZNF548-209ENST00000598895 LHX8Q68G74 356 aa14.02□□□□□ -0.17
ZNF548-209ENST00000598895 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.02□□□□□ -0.17
ZNF548-209ENST00000598895 DHX32Q7L7V1 743 aaKnown RBP14.02□□□□□ -0.17
ZNF548-209ENST00000598895 FBXO11Q86XK2 927 aa14.02□□□□□ -0.17
ZNF548-209ENST00000598895 CMTR1Q8N1G2 835 aaKnown RBP14.02□□□□□ -0.17
ZNF548-209ENST00000598895 FAM133AQ8N9E0 248 aa14.02□□□□□ -0.17
ZNF548-209ENST00000598895 IL27Q8NEV9 243 aa14.02□□□□□ -0.17
ZNF548-209ENST00000598895 CTCFLQ8NI51 663 aaPredicted RBP14.02□□□□□ -0.17
ZNF548-209ENST00000598895 PAWRQ96IZ0 340 aaKnown RBP14.02□□□□□ -0.17
ZNF548-209ENST00000598895 PIGSQ96S52 555 aa14.02□□□□□ -0.17
ZNF548-209ENST00000598895 C22orf23Q9BZE7 217 aa14.02□□□□□ -0.17
ZNF548-209ENST00000598895 ZHX1Q9UKY1 873 aaPredicted RBP14.02□□□□□ -0.17
ZNF548-209ENST00000598895 SLC12A7Q9Y666 1083 aa14.02□□□□□ -0.17
ZNF548-209ENST00000598895 ASTN1O14525 1302 aa14.01□□□□□ -0.17
ZNF548-209ENST00000598895 CYTH3O43739 400 aa14.01□□□□□ -0.17
ZNF548-209ENST00000598895 PPP1R11O60927 126 aaPredicted RBP14.01□□□□□ -0.17
ZNF548-209ENST00000598895 DDAH1O94760 285 aa14.01□□□□□ -0.17
ZNF548-209ENST00000598895 PLEKHA8P1O95397 391 aa14.01□□□□□ -0.17
ZNF548-209ENST00000598895 SNAI1O95863 264 aaPredicted RBP14.01□□□□□ -0.17
ZNF548-209ENST00000598895 FGD1P98174 961 aa14.01□□□□□ -0.17
ZNF548-209ENST00000598895 EXOSC10Q01780 885 aaKnown RBP14.01□□□□□ -0.17
ZNF548-209ENST00000598895 TSGA10IPQ3SY00 556 aa14.01□□□□□ -0.17
ZNF548-209ENST00000598895 RNF207Q6ZRF8 634 aa14.01□□□□□ -0.17
ZNF548-209ENST00000598895 ARMCX2Q7L311 632 aa14.01□□□□□ -0.17
ZNF548-209ENST00000598895 MICU3Q86XE3 530 aa14.01□□□□□ -0.17
ZNF548-209ENST00000598895 TBC1D5Q92609 795 aa14.01□□□□□ -0.17
ZNF548-209ENST00000598895 LENG1Q96BZ8 264 aaPredicted RBP14.01□□□□□ -0.17
ZNF548-209ENST00000598895 MTA3Q9BTC8 594 aa14.01□□□□□ -0.17
ZNF548-209ENST00000598895 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.01□□□□□ -0.17
ZNF548-209ENST00000598895 CHMP5Q9NZZ3 219 aa14.01□□□□□ -0.17
ZNF548-209ENST00000598895 OGDHLQ9ULD0 1010 aa14.01□□□□□ -0.17
ZNF548-209ENST00000598895 NAP1L2Q9ULW6 460 aaPredicted RBP14.01□□□□□ -0.17
ZNF548-209ENST00000598895 CNPY2Q9Y2B0 182 aa14.01□□□□□ -0.17
ZNF548-209ENST00000598895 LRRC37A2A6NM11 1700 aa14.01□□□□□ -0.17
ZNF548-209ENST00000598895 ABCB11O95342 1321 aa14□□□□□ -0.17
ZNF548-209ENST00000598895 SEPT4O43236 478 aa14□□□□□ -0.17
ZNF548-209ENST00000598895 LIFRP42702 1097 aa14□□□□□ -0.17
ZNF548-209ENST00000598895 BLOC1S2Q6QNY1 142 aa14□□□□□ -0.17
ZNF548-209ENST00000598895 EEPD1Q7L9B9 569 aa14□□□□□ -0.17
ZNF548-209ENST00000598895 HSCBQ8IWL3 235 aa14□□□□□ -0.17
ZNF548-209ENST00000598895 TMTC2Q8N394 836 aa14□□□□□ -0.17
ZNF548-209ENST00000598895 CCDC82Q8N4S0 544 aa14□□□□□ -0.17
ZNF548-209ENST00000598895 KCNB2Q92953 911 aa14□□□□□ -0.17
ZNF548-209ENST00000598895 AMNQ9BXJ7 453 aa14□□□□□ -0.17
ZNF548-209ENST00000598895 USP26Q9BXU7 913 aa14□□□□□ -0.17
ZNF548-209ENST00000598895 BRPF3Q9ULD4 1205 aa14□□□□□ -0.17
ZNF548-209ENST00000598895 SYNGAP1Q96PV0 1343 aa13.99□□□□□ -0.17
ZNF548-209ENST00000598895 KLF18A0A0U1RQI7 1052 aa13.99□□□□□ -0.17
ZNF548-209ENST00000598895 ZBTB5O15062 677 aa13.99□□□□□ -0.17
ZNF548-209ENST00000598895 ZNF865P0CJ78 1059 aaPredicted RBP13.99□□□□□ -0.17
ZNF548-209ENST00000598895 CASTP20810 708 aaKnown RBP13.99□□□□□ -0.17
ZNF548-209ENST00000598895 PTMSP20962 102 aa13.99□□□□□ -0.17
ZNF548-209ENST00000598895 KIF5BP33176 963 aa13.99□□□□□ -0.17
ZNF548-209ENST00000598895 MNX1P50219 401 aaPredicted RBP13.99□□□□□ -0.17
ZNF548-209ENST00000598895 RPS6P62753 249 aaKnown RBP13.99□□□□□ -0.17
ZNF548-209ENST00000598895 GJC2Q5T442 439 aaPredicted RBP13.99□□□□□ -0.17
ZNF548-209ENST00000598895 MAMDC4Q6UXC1 1216 aa13.99□□□□□ -0.17
ZNF548-209ENST00000598895 SYNE3Q6ZMZ3 975 aa13.99□□□□□ -0.17
ZNF548-209ENST00000598895 Q6ZUG5 572 aa13.99□□□□□ -0.17
ZNF548-209ENST00000598895 ZNF467Q7Z7K2 595 aaPredicted RBP13.99□□□□□ -0.17
ZNF548-209ENST00000598895 RIOX1Q9H6W3 641 aa13.99□□□□□ -0.17
ZNF548-209ENST00000598895 PNMA2Q9UL42 364 aa13.99□□□□□ -0.17
ZNF548-209ENST00000598895 hCG_1642624A0A1W2PR95 340 aa13.98□□□□□ -0.17
ZNF548-209ENST00000598895 MSCO60682 206 aa13.98□□□□□ -0.17
ZNF548-209ENST00000598895 HMGB1P09429 215 aaKnown RBP13.98□□□□□ -0.17
ZNF548-209ENST00000598895 CALM1P0DP23 149 aa13.98□□□□□ -0.17
ZNF548-209ENST00000598895 CALM2P0DP24 149 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms