RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 RANBP6O60518 1105 aaKnown RBP20.1■□□□□ 0.81
PNKP-210ENST00000597965 CSF2RAP15509 400 aa20.1■□□□□ 0.81
PNKP-210ENST00000597965 KCTD1Q719H9 257 aa20.1■□□□□ 0.81
PNKP-210ENST00000597965 DCAF4Q8WV16 495 aa20.1■□□□□ 0.81
PNKP-210ENST00000597965 EVI5LQ96CN4 794 aa20.1■□□□□ 0.81
PNKP-210ENST00000597965 GAS2L1Q99501 681 aaPredicted RBP20.1■□□□□ 0.81
PNKP-210ENST00000597965 VTA1Q9NP79 307 aa20.1■□□□□ 0.81
PNKP-210ENST00000597965 CYP39A1Q9NYL5 469 aa20.1■□□□□ 0.81
PNKP-210ENST00000597965 CCPG1Q9ULG6 757 aa20.1■□□□□ 0.81
PNKP-210ENST00000597965 PRR12Q9ULL5 1215 aa20.1■□□□□ 0.81
PNKP-210ENST00000597965 GNEQ9Y223 722 aaKnown RBP20.1■□□□□ 0.81
PNKP-210ENST00000597965 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.1■□□□□ 0.81
PNKP-210ENST00000597965 VCANP13611 3396 aa20.1■□□□□ 0.81
PNKP-210ENST00000597965 SOWAHBA6NEL2 793 aa20.09■□□□□ 0.81
PNKP-210ENST00000597965 CD4P01730 458 aa20.09■□□□□ 0.81
PNKP-210ENST00000597965 ICAM1P05362 532 aa20.09■□□□□ 0.81
PNKP-210ENST00000597965 ITGA7Q13683 1181 aa20.09■□□□□ 0.81
PNKP-210ENST00000597965 RAB30Q15771 203 aa20.09■□□□□ 0.81
PNKP-210ENST00000597965 CXCL17Q6UXB2 119 aa20.09■□□□□ 0.81
PNKP-210ENST00000597965 SLC43A3Q8NBI5 491 aa20.09■□□□□ 0.81
PNKP-210ENST00000597965 MPHOSPH6Q99547 160 aaKnown RBP20.09■□□□□ 0.81
PNKP-210ENST00000597965 PPP1R12CQ9BZL4 782 aa20.09■□□□□ 0.81
PNKP-210ENST00000597965 IL23AQ9NPF7 189 aa20.09■□□□□ 0.81
PNKP-210ENST00000597965 CTAGE5O15320 804 aa20.08■□□□□ 0.81
PNKP-210ENST00000597965 ORC4O43929 436 aa20.08■□□□□ 0.81
PNKP-210ENST00000597965 BEX3Q00994 111 aa20.08■□□□□ 0.81
PNKP-210ENST00000597965 GRIN2CQ14957 1233 aa20.08■□□□□ 0.81
PNKP-210ENST00000597965 RASIP1Q5U651 963 aa20.08■□□□□ 0.81
PNKP-210ENST00000597965 HIPK3Q9H422 1215 aa20.08■□□□□ 0.81
PNKP-210ENST00000597965 IL17RBQ9NRM6 502 aa20.08■□□□□ 0.81
PNKP-210ENST00000597965 HELLSQ9NRZ9 838 aa20.08■□□□□ 0.81
PNKP-210ENST00000597965 MSRAQ9UJ68 235 aa20.08■□□□□ 0.81
PNKP-210ENST00000597965 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.07■□□□□ 0.8
PNKP-210ENST00000597965 DYNC1LI2O43237 492 aaPredicted RBP20.07■□□□□ 0.8
PNKP-210ENST00000597965 NOVP48745 357 aa20.07■□□□□ 0.8
PNKP-210ENST00000597965 IRX5P78411 483 aaPredicted RBP20.07■□□□□ 0.8
PNKP-210ENST00000597965 CTDSPL2Q05D32 466 aa20.07■□□□□ 0.8
PNKP-210ENST00000597965 ALX1Q15699 326 aa20.07■□□□□ 0.8
PNKP-210ENST00000597965 CCDC96Q2M329 555 aa20.07■□□□□ 0.8
PNKP-210ENST00000597965 NSMFQ6X4W1 530 aa20.07■□□□□ 0.8
PNKP-210ENST00000597965 ZNF365Q70YC5 407 aa20.07■□□□□ 0.8
PNKP-210ENST00000597965 C16orf59Q7L2K0 433 aa20.07■□□□□ 0.8
PNKP-210ENST00000597965 RPUSD2Q8IZ73 545 aaKnown RBP20.07■□□□□ 0.8
PNKP-210ENST00000597965 HERVK_113Q902F9 699 aa20.07■□□□□ 0.8
PNKP-210ENST00000597965 FGBP02675 491 aa20.06■□□□□ 0.8
PNKP-210ENST00000597965 SUPT20HL2P0C7V6 817 aa20.06■□□□□ 0.8
PNKP-210ENST00000597965 PCP11498 1178 aaKnown RBP20.06■□□□□ 0.8
PNKP-210ENST00000597965 SMPD1P17405 629 aa20.06■□□□□ 0.8
PNKP-210ENST00000597965 BRDTQ58F21 947 aaPredicted RBP20.06■□□□□ 0.8
PNKP-210ENST00000597965 KIAA1211Q6ZU35 1233 aa20.06■□□□□ 0.8
PNKP-210ENST00000597965 PBX4Q9BYU1 374 aa20.06■□□□□ 0.8
PNKP-210ENST00000597965 RANBP17Q9H2T7 1088 aaKnown RBP20.06■□□□□ 0.8
PNKP-210ENST00000597965 TOMM22Q9NS69 142 aa20.06■□□□□ 0.8
PNKP-210ENST00000597965 PCDHB15Q9Y5E8 787 aa20.06■□□□□ 0.8
PNKP-210ENST00000597965 PRUNE2Q8WUY3 3088 aa20.06■□□□□ 0.8
PNKP-210ENST00000597965 B4DLN1 442 aa20.05■□□□□ 0.8
PNKP-210ENST00000597965 FGRP09769 529 aa20.05■□□□□ 0.8
PNKP-210ENST00000597965 ACRP10323 421 aa20.05■□□□□ 0.8
PNKP-210ENST00000597965 TOP1P11387 765 aaKnown RBP20.05■□□□□ 0.8
PNKP-210ENST00000597965 CYP2C18P33260 490 aa20.05■□□□□ 0.8
PNKP-210ENST00000597965 CPT1AP50416 773 aa20.05■□□□□ 0.8
PNKP-210ENST00000597965 MRPL12P52815 198 aaKnown RBP20.05■□□□□ 0.8
PNKP-210ENST00000597965 MUM1L1Q5H9M0 696 aa20.05■□□□□ 0.8
PNKP-210ENST00000597965 BTNL9Q6UXG8 535 aa20.05■□□□□ 0.8
PNKP-210ENST00000597965 MORC4Q8TE76 937 aa20.05■□□□□ 0.8
PNKP-210ENST00000597965 TCP11L1Q9NUJ3 509 aa20.05■□□□□ 0.8
PNKP-210ENST00000597965 POLR3EQ9NVU0 708 aa20.05■□□□□ 0.8
PNKP-210ENST00000597965 ASTN1O14525 1302 aa20.04■□□□□ 0.8
PNKP-210ENST00000597965 RAD50Q92878 1312 aa20.04■□□□□ 0.8
PNKP-210ENST00000597965 NMT2O60551 498 aa20.04■□□□□ 0.8
PNKP-210ENST00000597965 PFKMP08237 780 aa20.04■□□□□ 0.8
PNKP-210ENST00000597965 DUSP28Q4G0W2 176 aa20.04■□□□□ 0.8
PNKP-210ENST00000597965 TJAP1Q5JTD0 557 aa20.04■□□□□ 0.8
PNKP-210ENST00000597965 AKNAD1Q5T1N1 836 aa20.04■□□□□ 0.8
PNKP-210ENST00000597965 TAPT1Q6NXT6 567 aa20.04■□□□□ 0.8
PNKP-210ENST00000597965 EEPD1Q7L9B9 569 aa20.04■□□□□ 0.8
PNKP-210ENST00000597965 FBXO16Q8IX29 292 aaPredicted RBP20.04■□□□□ 0.8
PNKP-210ENST00000597965 OTUD7AQ8TE49 926 aaPredicted RBP20.04■□□□□ 0.8
PNKP-210ENST00000597965 CHMP4CQ96CF2 233 aa20.04■□□□□ 0.8
PNKP-210ENST00000597965 GPHNQ9NQX3 736 aaPredicted RBP20.04■□□□□ 0.8
PNKP-210ENST00000597965 MTMR7Q9Y216 660 aa20.04■□□□□ 0.8
PNKP-210ENST00000597965 NT5C2P49902 561 aa20.03■□□□□ 0.8
PNKP-210ENST00000597965 MCMDC2Q4G0Z9 681 aa20.03■□□□□ 0.8
PNKP-210ENST00000597965 ANKRD45Q5TZF3 282 aa20.03■□□□□ 0.8
PNKP-210ENST00000597965 SYDE2Q5VT97 1194 aa20.03■□□□□ 0.8
PNKP-210ENST00000597965 TTC14Q96N46 770 aa20.03■□□□□ 0.8
PNKP-210ENST00000597965 SLC28A3Q9HAS3 691 aa20.03■□□□□ 0.8
PNKP-210ENST00000597965 ZMYM6O95789 1325 aa20.02■□□□□ 0.8
PNKP-210ENST00000597965 LRRC37A2A6NM11 1700 aa20.02■□□□□ 0.8
PNKP-210ENST00000597965 PTPDC1A2A3K4 754 aa20.02■□□□□ 0.8
PNKP-210ENST00000597965 NKRFO15226 690 aaKnown RBP eCLIP20.02■□□□□ 0.8
PNKP-210ENST00000597965 FOXP2O15409 715 aa20.02■□□□□ 0.8
PNKP-210ENST00000597965 ALDH5A1P51649 535 aaPredicted RBP20.02■□□□□ 0.8
PNKP-210ENST00000597965 MFAP1P55081 439 aaKnown RBP20.02■□□□□ 0.8
PNKP-210ENST00000597965 SNAP25P60880 206 aa20.02■□□□□ 0.8
PNKP-210ENST00000597965 BAATQ14032 418 aaPredicted RBP20.02■□□□□ 0.8
PNKP-210ENST00000597965 WDR11Q9BZH6 1224 aa20.02■□□□□ 0.8
PNKP-210ENST00000597965 PDGFCQ9NRA1 345 aa20.02■□□□□ 0.8
PNKP-210ENST00000597965 SALL3Q9BXA9 1300 aa20.02■□□□□ 0.79
PNKP-210ENST00000597965 B4GALT4O60513 344 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms