RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 CABYRO75952 493 aa16.51■□□□□ 0.23
C19orf54-206ENST00000596940 HAND2P61296 217 aa16.51■□□□□ 0.23
C19orf54-206ENST00000596940 NKX3-2P78367 333 aa16.51■□□□□ 0.23
C19orf54-206ENST00000596940 PWP2Q15269 919 aaKnown RBP16.51■□□□□ 0.23
C19orf54-206ENST00000596940 IQSEC1Q6DN90 963 aa16.51■□□□□ 0.23
C19orf54-206ENST00000596940 NSMFQ6X4W1 530 aa16.51■□□□□ 0.23
C19orf54-206ENST00000596940 SH3RF1Q7Z6J0 888 aa16.51■□□□□ 0.23
C19orf54-206ENST00000596940 MPHOSPH6Q99547 160 aaKnown RBP16.51■□□□□ 0.23
C19orf54-206ENST00000596940 SEZ6LQ9BYH1 1024 aa16.51■□□□□ 0.23
C19orf54-206ENST00000596940 AP5M1Q9H0R1 490 aa16.51■□□□□ 0.23
C19orf54-206ENST00000596940 MTMR10Q9NXD2 777 aa16.51■□□□□ 0.23
C19orf54-206ENST00000596940 STXBP5LQ9Y2K9 1186 aa16.51■□□□□ 0.23
C19orf54-206ENST00000596940 A0A0U1RQG5 324 aaPredicted RBP16.5■□□□□ 0.23
C19orf54-206ENST00000596940 SOWAHBA6NEL2 793 aa16.5■□□□□ 0.23
C19orf54-206ENST00000596940 IGHDP01880 384 aa16.5■□□□□ 0.23
C19orf54-206ENST00000596940 ASGR1P07306 291 aa16.5■□□□□ 0.23
C19orf54-206ENST00000596940 SHHQ15465 462 aa16.5■□□□□ 0.23
C19orf54-206ENST00000596940 GPATCH4Q5T3I0 446 aaKnown RBP16.5■□□□□ 0.23
C19orf54-206ENST00000596940 IQCA1Q86XH1 822 aa16.5■□□□□ 0.23
C19orf54-206ENST00000596940 DGKHQ86XP1 1220 aa16.5■□□□□ 0.23
C19orf54-206ENST00000596940 GPCPD1Q9NPB8 672 aa16.5■□□□□ 0.23
C19orf54-206ENST00000596940 CTNNA3Q9UI47 895 aa16.5■□□□□ 0.23
C19orf54-206ENST00000596940 Q9Y3F1 56 aa16.5■□□□□ 0.23
C19orf54-206ENST00000596940 COL11A1P12107 1806 aaPredicted RBP16.49■□□□□ 0.23
C19orf54-206ENST00000596940 FRMPD3Q5JV73 1810 aa16.49■□□□□ 0.23
C19orf54-206ENST00000596940 B4DLN1 442 aa16.49■□□□□ 0.23
C19orf54-206ENST00000596940 TLR3O15455 904 aaKnown RBP16.49■□□□□ 0.23
C19orf54-206ENST00000596940 PDHBP11177 359 aa16.49■□□□□ 0.23
C19orf54-206ENST00000596940 SLC16A2P36021 539 aa16.49■□□□□ 0.23
C19orf54-206ENST00000596940 MRPL12P52815 198 aaKnown RBP16.49■□□□□ 0.23
C19orf54-206ENST00000596940 SNAP25P60880 206 aa16.49■□□□□ 0.23
C19orf54-206ENST00000596940 FPGSQ05932 587 aa16.49■□□□□ 0.23
C19orf54-206ENST00000596940 FAAP100Q0VG06 881 aa16.49■□□□□ 0.23
C19orf54-206ENST00000596940 MUM1L1Q5H9M0 696 aa16.49■□□□□ 0.23
C19orf54-206ENST00000596940 CWC27Q6UX04 472 aaKnown RBP16.49■□□□□ 0.23
C19orf54-206ENST00000596940 Q7L0L9 218 aa16.49■□□□□ 0.23
C19orf54-206ENST00000596940 KATNBL1Q9H079 304 aa16.49■□□□□ 0.23
C19orf54-206ENST00000596940 VTA1Q9NP79 307 aa16.49■□□□□ 0.23
C19orf54-206ENST00000596940 ZNFX1Q9P2E3 1918 aaKnown RBP16.49■□□□□ 0.23
C19orf54-206ENST00000596940 ARVCFO00192 962 aa16.48■□□□□ 0.23
C19orf54-206ENST00000596940 CDK7P50613 346 aa16.48■□□□□ 0.23
C19orf54-206ENST00000596940 SMAD3P84022 425 aaKnown RBP16.48■□□□□ 0.23
C19orf54-206ENST00000596940 ZNF543Q08ER8 600 aa16.48■□□□□ 0.23
C19orf54-206ENST00000596940 ZNF697Q5TEC3 545 aa16.48■□□□□ 0.23
C19orf54-206ENST00000596940 TTBK2Q6IQ55 1244 aa16.48■□□□□ 0.23
C19orf54-206ENST00000596940 EXOC6Q8TAG9 804 aa16.48■□□□□ 0.23
C19orf54-206ENST00000596940 DSCC1Q9BVC3 393 aa16.48■□□□□ 0.23
C19orf54-206ENST00000596940 MAF1Q9H063 256 aa16.48■□□□□ 0.23
C19orf54-206ENST00000596940 MYH4Q9Y623 1939 aa16.48■□□□□ 0.23
C19orf54-206ENST00000596940 FRMPD2Q68DX3 1309 aaPredicted RBP16.47■□□□□ 0.23
C19orf54-206ENST00000596940 WDR19Q8NEZ3 1342 aa16.47■□□□□ 0.23
C19orf54-206ENST00000596940 SMCHD1A6NHR9 2005 aa16.47■□□□□ 0.23
C19orf54-206ENST00000596940 MYADML2A6NDP7 307 aa16.47■□□□□ 0.23
C19orf54-206ENST00000596940 TIMP1P01033 207 aa16.47■□□□□ 0.23
C19orf54-206ENST00000596940 SNHG28P0DPA3 235 aa16.47■□□□□ 0.23
C19orf54-206ENST00000596940 BAATQ14032 418 aaPredicted RBP16.47■□□□□ 0.23
C19orf54-206ENST00000596940 IMMTQ16891 758 aaKnown RBP16.47■□□□□ 0.23
C19orf54-206ENST00000596940 C9orf50Q5SZB4 431 aa16.47■□□□□ 0.23
C19orf54-206ENST00000596940 TLK2Q86UE8 772 aa16.47■□□□□ 0.23
C19orf54-206ENST00000596940 TBC1D10CQ8IV04 446 aa16.47■□□□□ 0.23
C19orf54-206ENST00000596940 MORC4Q8TE76 937 aa16.47■□□□□ 0.23
C19orf54-206ENST00000596940 GNEQ9Y223 722 aaKnown RBP16.47■□□□□ 0.23
C19orf54-206ENST00000596940 PTPDC1A2A3K4 754 aa16.46■□□□□ 0.23
C19orf54-206ENST00000596940 DYNC1LI2O43237 492 aaPredicted RBP16.46■□□□□ 0.23
C19orf54-206ENST00000596940 ADCY6O43306 1168 aa16.46■□□□□ 0.23
C19orf54-206ENST00000596940 FSCN1Q16658 493 aaKnown RBP16.46■□□□□ 0.23
C19orf54-206ENST00000596940 RNF207Q6ZRF8 634 aa16.46■□□□□ 0.23
C19orf54-206ENST00000596940 KIAA1211Q6ZU35 1233 aa16.46■□□□□ 0.23
C19orf54-206ENST00000596940 RASGRP2Q7LDG7 609 aa16.46■□□□□ 0.23
C19orf54-206ENST00000596940 TMEM199Q8N511 208 aa16.46■□□□□ 0.23
C19orf54-206ENST00000596940 RNPC3Q96LT9 517 aaKnown RBP16.46■□□□□ 0.23
C19orf54-206ENST00000596940 KRT23Q9C075 422 aa16.46■□□□□ 0.23
C19orf54-206ENST00000596940 KAT14Q9H8E8 782 aa16.46■□□□□ 0.23
C19orf54-206ENST00000596940 CNNM2Q9H8M5 875 aa16.46■□□□□ 0.23
C19orf54-206ENST00000596940 KDM4AO75164 1064 aa16.45■□□□□ 0.22
C19orf54-206ENST00000596940 SMPD1P17405 629 aa16.45■□□□□ 0.22
C19orf54-206ENST00000596940 ITGB8P26012 769 aa16.45■□□□□ 0.22
C19orf54-206ENST00000596940 PPIGQ13427 754 aaKnown RBP eCLIP16.45■□□□□ 0.229e-7■□□□□ 10.9
C19orf54-206ENST00000596940 BRDTQ58F21 947 aaPredicted RBP16.45■□□□□ 0.22
C19orf54-206ENST00000596940 MFSD5Q6N075 450 aa16.45■□□□□ 0.22
C19orf54-206ENST00000596940 TAPT1Q6NXT6 567 aa16.45■□□□□ 0.22
C19orf54-206ENST00000596940 EEPD1Q7L9B9 569 aa16.45■□□□□ 0.22
C19orf54-206ENST00000596940 RGS22Q8NE09 1264 aa16.45■□□□□ 0.22
C19orf54-206ENST00000596940 TBX21Q9UL17 535 aa16.45■□□□□ 0.22
C19orf54-206ENST00000596940 PLXNA1Q9UIW2 1896 aa16.44■□□□□ 0.22
C19orf54-206ENST00000596940 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.44■□□□□ 0.22
C19orf54-206ENST00000596940 NFIBO00712 420 aa16.44■□□□□ 0.22
C19orf54-206ENST00000596940 CTAGE5O15320 804 aa16.44■□□□□ 0.22
C19orf54-206ENST00000596940 CALML3P27482 149 aa16.44■□□□□ 0.22
C19orf54-206ENST00000596940 ALDH5A1P51649 535 aaPredicted RBP16.44■□□□□ 0.22
C19orf54-206ENST00000596940 BEX3Q00994 111 aa16.44■□□□□ 0.22
C19orf54-206ENST00000596940 DUSP28Q4G0W2 176 aa16.44■□□□□ 0.22
C19orf54-206ENST00000596940 CXCL17Q6UXB2 119 aa16.44■□□□□ 0.22
C19orf54-206ENST00000596940 FBXO16Q8IX29 292 aaPredicted RBP16.44■□□□□ 0.22
C19orf54-206ENST00000596940 PNMA1Q8ND90 353 aa16.44■□□□□ 0.22
C19orf54-206ENST00000596940 DNERQ8NFT8 737 aa16.44■□□□□ 0.22
C19orf54-206ENST00000596940 ANKS1AQ92625 1134 aa16.44■□□□□ 0.22
C19orf54-206ENST00000596940 ZSCAN10Q96SZ4 725 aaPredicted RBP16.44■□□□□ 0.22
C19orf54-206ENST00000596940 NEDD4P46934 1319 aa16.44■□□□□ 0.22
C19orf54-206ENST00000596940 TMEM265A0A087WTH1 108 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms