RNA–Protein interactions for RNA: ENST00000595681.5

SH2D3A-204, Transcript of SH2 domain containing 3A, humanhuman

TSL 5

Gene SH2D3A, Length 1,750 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-204ENST00000595681 DIS3Q9Y2L1 958 aaKnown RBP24.24■■□□□ 1.47
SH2D3A-204ENST00000595681 EPB41L2O43491 1005 aaKnown RBP24.24■■□□□ 1.47
SH2D3A-204ENST00000595681 CYTH3O43739 400 aa24.24■■□□□ 1.47
SH2D3A-204ENST00000595681 CYBAP13498 195 aa24.24■■□□□ 1.47
SH2D3A-204ENST00000595681 CASTP20810 708 aaKnown RBP24.24■■□□□ 1.47
SH2D3A-204ENST00000595681 BLOC1S2Q6QNY1 142 aa24.24■■□□□ 1.47
SH2D3A-204ENST00000595681 WDR19Q8NEZ3 1342 aa24.23■■□□□ 1.47
SH2D3A-204ENST00000595681 MLLT1Q03111 559 aaPredicted RBP24.23■■□□□ 1.47
SH2D3A-204ENST00000595681 NSMFQ6X4W1 530 aa24.23■■□□□ 1.47
SH2D3A-204ENST00000595681 TMTC2Q8N394 836 aa24.23■■□□□ 1.47
SH2D3A-204ENST00000595681 TINF2Q9BSI4 451 aa24.23■■□□□ 1.47
SH2D3A-204ENST00000595681 CRISPLD2Q9H0B8 497 aa24.23■■□□□ 1.47
SH2D3A-204ENST00000595681 CYP39A1Q9NYL5 469 aa24.23■■□□□ 1.47
SH2D3A-204ENST00000595681 DDX49Q9Y6V7 483 aaKnown RBP24.23■■□□□ 1.47
SH2D3A-204ENST00000595681 DDAH1O94760 285 aa24.22■■□□□ 1.47
SH2D3A-204ENST00000595681 C8orf34Q49A92 452 aa24.22■■□□□ 1.47
SH2D3A-204ENST00000595681 FAM133AQ8N9E0 248 aa24.22■■□□□ 1.47
SH2D3A-204ENST00000595681 BRPF3Q9ULD4 1205 aa24.22■■□□□ 1.47
SH2D3A-204ENST00000595681 SLC12A7Q9Y666 1083 aa24.22■■□□□ 1.47
SH2D3A-204ENST00000595681 ASTN1O14525 1302 aa24.22■■□□□ 1.47
SH2D3A-204ENST00000595681 PPP1R11O60927 126 aaPredicted RBP24.21■■□□□ 1.47
SH2D3A-204ENST00000595681 HMGB1P09429 215 aaKnown RBP24.21■■□□□ 1.47
SH2D3A-204ENST00000595681 LHX8Q68G74 356 aa24.21■■□□□ 1.47
SH2D3A-204ENST00000595681 Q6ZUG5 572 aa24.21■■□□□ 1.47
SH2D3A-204ENST00000595681 SGMS1Q86VZ5 419 aa24.21■■□□□ 1.47
SH2D3A-204ENST00000595681 MICU3Q86XE3 530 aa24.21■■□□□ 1.47
SH2D3A-204ENST00000595681 PIBF1Q8WXW3 757 aa24.21■■□□□ 1.47
SH2D3A-204ENST00000595681 MTMR8Q96EF0 704 aa24.21■■□□□ 1.47
SH2D3A-204ENST00000595681 SOWAHBA6NEL2 793 aa24.21■■□□□ 1.47
SH2D3A-204ENST00000595681 TFRCP02786 760 aaKnown RBP24.21■■□□□ 1.47
SH2D3A-204ENST00000595681 RPS6KB1P23443 525 aa24.21■■□□□ 1.47
SH2D3A-204ENST00000595681 FGD1P98174 961 aa24.21■■□□□ 1.47
SH2D3A-204ENST00000595681 HOMER1Q86YM7 354 aa24.21■■□□□ 1.47
SH2D3A-204ENST00000595681 CMTR1Q8N1G2 835 aaKnown RBP24.21■■□□□ 1.47
SH2D3A-204ENST00000595681 POTEB2H3BUK9 544 aa24.2■■□□□ 1.46
SH2D3A-204ENST00000595681 PLEKHA8P1O95397 391 aa24.2■■□□□ 1.46
SH2D3A-204ENST00000595681 CNGA1P29973 690 aa24.2■■□□□ 1.46
SH2D3A-204ENST00000595681 BAATQ14032 418 aaPredicted RBP24.2■■□□□ 1.46
SH2D3A-204ENST00000595681 SLC30A10Q6XR72 485 aa24.2■■□□□ 1.46
SH2D3A-204ENST00000595681 CTCFLQ8NI51 663 aaPredicted RBP24.2■■□□□ 1.46
SH2D3A-204ENST00000595681 RIOX1Q9H6W3 641 aa24.2■■□□□ 1.46
SH2D3A-204ENST00000595681 SNAI1O95863 264 aaPredicted RBP24.19■■□□□ 1.46
SH2D3A-204ENST00000595681 PSMA5P28066 241 aa24.19■■□□□ 1.46
SH2D3A-204ENST00000595681 APOA5Q6Q788 366 aa24.19■■□□□ 1.46
SH2D3A-204ENST00000595681 PIGSQ96S52 555 aa24.19■■□□□ 1.46
SH2D3A-204ENST00000595681 UPF3BQ9BZI7 483 aaKnown RBP24.19■■□□□ 1.46
SH2D3A-204ENST00000595681 NAP1L2Q9ULW6 460 aaPredicted RBP24.19■■□□□ 1.46
SH2D3A-204ENST00000595681 PFASO15067 1338 aa24.19■■□□□ 1.46
SH2D3A-204ENST00000595681 APOBRQ0VD83 1088 aa24.19■■□□□ 1.46
SH2D3A-204ENST00000595681 ANO1Q5XXA6 986 aa24.19■■□□□ 1.46
SH2D3A-204ENST00000595681 MAMDC4Q6UXC1 1216 aa24.19■■□□□ 1.46
SH2D3A-204ENST00000595681 TBC1D5Q92609 795 aa24.19■■□□□ 1.46
SH2D3A-204ENST00000595681 BRF1Q92994 677 aa24.19■■□□□ 1.46
SH2D3A-204ENST00000595681 MAP3K14Q99558 947 aa24.19■■□□□ 1.46
SH2D3A-204ENST00000595681 KLF18A0A0U1RQI7 1052 aa24.18■■□□□ 1.46
SH2D3A-204ENST00000595681 UBE2Q1Q7Z7E8 422 aa24.18■■□□□ 1.46
SH2D3A-204ENST00000595681 ZNF467Q7Z7K2 595 aaPredicted RBP24.18■■□□□ 1.46
SH2D3A-204ENST00000595681 FBXO11Q86XK2 927 aa24.18■■□□□ 1.46
SH2D3A-204ENST00000595681 DDX20Q9UHI6 824 aaKnown RBP24.18■■□□□ 1.46
SH2D3A-204ENST00000595681 PTPDC1A2A3K4 754 aa24.17■■□□□ 1.46
SH2D3A-204ENST00000595681 ZBTB5O15062 677 aa24.17■■□□□ 1.46
SH2D3A-204ENST00000595681 MNX1P50219 401 aaPredicted RBP24.17■■□□□ 1.46
SH2D3A-204ENST00000595681 RUFY3Q7L099 469 aa24.17■■□□□ 1.46
SH2D3A-204ENST00000595681 CCDC82Q8N4S0 544 aa24.17■■□□□ 1.46
SH2D3A-204ENST00000595681 SRBD1Q8N5C6 995 aaKnown RBP24.17■■□□□ 1.46
SH2D3A-204ENST00000595681 DIS3LQ8TF46 1054 aaKnown RBP24.17■■□□□ 1.46
SH2D3A-204ENST00000595681 ZSWIM6Q9HCJ5 1215 aa24.17■■□□□ 1.46
SH2D3A-204ENST00000595681 PNMA2Q9UL42 364 aa24.17■■□□□ 1.46
SH2D3A-204ENST00000595681 OGDHLQ9ULD0 1010 aa24.17■■□□□ 1.46
SH2D3A-204ENST00000595681 LCTP09848 1927 aa24.17■■□□□ 1.46
SH2D3A-204ENST00000595681 ZNF865P0CJ78 1059 aaPredicted RBP24.16■■□□□ 1.46
SH2D3A-204ENST00000595681 KIF5BP33176 963 aa24.16■■□□□ 1.46
SH2D3A-204ENST00000595681 SYNE3Q6ZMZ3 975 aa24.16■■□□□ 1.46
SH2D3A-204ENST00000595681 FANCBQ8NB91 859 aa24.16■■□□□ 1.46
SH2D3A-204ENST00000595681 SYNGAP1Q96PV0 1343 aa24.16■■□□□ 1.46
SH2D3A-204ENST00000595681 CALML3P27482 149 aa24.16■■□□□ 1.46
SH2D3A-204ENST00000595681 RPS6P62753 249 aaKnown RBP24.16■■□□□ 1.46
SH2D3A-204ENST00000595681 RNF207Q6ZRF8 634 aa24.16■■□□□ 1.46
SH2D3A-204ENST00000595681 ARMCX2Q7L311 632 aa24.16■■□□□ 1.46
SH2D3A-204ENST00000595681 MSL3Q8N5Y2 521 aaKnown RBP24.16■■□□□ 1.46
SH2D3A-204ENST00000595681 LARP6Q9BRS8 491 aaKnown RBP24.16■■□□□ 1.46
SH2D3A-204ENST00000595681 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.16■■□□□ 1.46
SH2D3A-204ENST00000595681 MCM3APO60318 1980 aa24.16■■□□□ 1.46
SH2D3A-204ENST00000595681 ABCB11O95342 1321 aa24.15■■□□□ 1.46
SH2D3A-204ENST00000595681 OPLAHO14841 1288 aa24.15■■□□□ 1.46
SH2D3A-204ENST00000595681 SEPT4O43236 478 aa24.15■■□□□ 1.46
SH2D3A-204ENST00000595681 ZBTB43O43298 467 aa24.15■■□□□ 1.46
SH2D3A-204ENST00000595681 CALM1P0DP23 149 aa24.15■■□□□ 1.46
SH2D3A-204ENST00000595681 CALM2P0DP24 149 aa24.15■■□□□ 1.46
SH2D3A-204ENST00000595681 CALM3P0DP25 149 aa24.15■■□□□ 1.46
SH2D3A-204ENST00000595681 LENG1Q96BZ8 264 aaPredicted RBP24.15■■□□□ 1.46
SH2D3A-204ENST00000595681 AMNQ9BXJ7 453 aa24.15■■□□□ 1.46
SH2D3A-204ENST00000595681 CYP46A1Q9Y6A2 500 aa24.15■■□□□ 1.46
SH2D3A-204ENST00000595681 hCG_1642624A0A1W2PR95 340 aa24.14■■□□□ 1.46
SH2D3A-204ENST00000595681 FARP2O94887 1054 aaPredicted RBP24.14■■□□□ 1.46
SH2D3A-204ENST00000595681 SPZ1Q9BXG8 430 aa24.14■■□□□ 1.45
SH2D3A-204ENST00000595681 KATNBL1Q9H079 304 aa24.14■■□□□ 1.45
SH2D3A-204ENST00000595681 ZHX1Q9UKY1 873 aaPredicted RBP24.14■■□□□ 1.45
SH2D3A-204ENST00000595681 CNPY2Q9Y2B0 182 aa24.14■■□□□ 1.45
SH2D3A-204ENST00000595681 PCDHA1Q9Y5I3 950 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms