RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 PIGSQ96S52 555 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 ZSWIM6Q9HCJ5 1215 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 A1CFQ9NQ94 594 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 FBXO40Q9UH90 709 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 NAP1L2Q9ULW6 460 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 CACNB2Q08289 660 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-207ENST00000595631 IFFO2Q5TF58 517 aa16.03■□□□□ 0.16
SHKBP1-207ENST00000595631 NSMFQ6X4W1 530 aa16.03■□□□□ 0.16
SHKBP1-207ENST00000595631 MTMR8Q96EF0 704 aa16.03■□□□□ 0.16
SHKBP1-207ENST00000595631 FGD4Q96M96 766 aa16.03■□□□□ 0.16
SHKBP1-207ENST00000595631 PURBQ96QR8 312 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-207ENST00000595631 MAP3K14Q99558 947 aa16.03■□□□□ 0.16
SHKBP1-207ENST00000595631 RIOX1Q9H6W3 641 aa16.03■□□□□ 0.16
SHKBP1-207ENST00000595631 ZBTB43O43298 467 aa16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 IGHA2P01877 340 aa16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 CALM1P0DP23 149 aa16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 CALM2P0DP24 149 aa16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 CALM3P0DP25 149 aa16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 CCND3P30281 292 aaPredicted RBP16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 KIF5BP33176 963 aa16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 CNTN2Q02246 1040 aa16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 MAP3K21Q5TCX8 1036 aa16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 FBXO11Q86XK2 927 aa16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 TRMT44Q8IYL2 757 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 SRBD1Q8N5C6 995 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 FANCBQ8NB91 859 aa16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 LARP6Q9BRS8 491 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 RNF208Q9H0X6 261 aa16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 CYP46A1Q9Y6A2 500 aa16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 DDX49Q9Y6V7 483 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-207ENST00000595631 hCG_1642624A0A1W2PR95 340 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 GOLGA8AA7E2F4 631 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 GOLGA8BA8MQT2 603 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 TOB2Q14106 344 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 PRAMEF19Q5SWL8 479 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 MFSD14CQ5VZR4 134 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 OLFML2BQ68BL8 750 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 SLC30A10Q6XR72 485 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 SYNE3Q6ZMZ3 975 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 CCDC82Q8N4S0 544 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 FAM133AQ8N9E0 248 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 TRPV1Q8NER1 839 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 TBC1D5Q92609 795 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 TMEM106CQ9BVX2 250 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 AGXT2Q9BYV1 514 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 TM6SF1Q9BZW5 370 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.01■□□□□ 0.159e-6■■■■■ 32.4
SHKBP1-207ENST00000595631 SLC5A4Q9NY91 659 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 CYP39A1Q9NYL5 469 aa16.01■□□□□ 0.15
SHKBP1-207ENST00000595631 ASTN1O14525 1302 aa16■□□□□ 0.15
SHKBP1-207ENST00000595631 ABCB11O95342 1321 aa16■□□□□ 0.15
SHKBP1-207ENST00000595631 RPTORQ8N122 1335 aa16■□□□□ 0.15
SHKBP1-207ENST00000595631 PTPDC1A2A3K4 754 aa16■□□□□ 0.15
SHKBP1-207ENST00000595631 SOWAHBA6NEL2 793 aa16■□□□□ 0.15
SHKBP1-207ENST00000595631 POTEB2H3BUK9 544 aa16■□□□□ 0.15
SHKBP1-207ENST00000595631 ZBTB5O15062 677 aa16■□□□□ 0.15
SHKBP1-207ENST00000595631 EN2P19622 333 aaPredicted RBP16■□□□□ 0.15
SHKBP1-207ENST00000595631 CDC27P30260 824 aa16■□□□□ 0.15
SHKBP1-207ENST00000595631 BAATQ14032 418 aaPredicted RBP16■□□□□ 0.15
SHKBP1-207ENST00000595631 RTN1Q16799 776 aa16■□□□□ 0.15
SHKBP1-207ENST00000595631 TMTC3Q6ZXV5 915 aa16■□□□□ 0.15
SHKBP1-207ENST00000595631 DEFB118Q96PH6 123 aa16■□□□□ 0.15
SHKBP1-207ENST00000595631 SPZ1Q9BXG8 430 aa16■□□□□ 0.15
SHKBP1-207ENST00000595631 FAM217BQ9NTX9 383 aaPredicted RBP16■□□□□ 0.15
SHKBP1-207ENST00000595631 DIS3Q9Y2L1 958 aaKnown RBP16■□□□□ 0.15
SHKBP1-207ENST00000595631 KIAA1217Q5T5P2 1943 aa16■□□□□ 0.15
SHKBP1-207ENST00000595631 PFASO15067 1338 aa15.99■□□□□ 0.15
SHKBP1-207ENST00000595631 OPLAHO14841 1288 aa15.99■□□□□ 0.15
SHKBP1-207ENST00000595631 CALML3P27482 149 aa15.99■□□□□ 0.15
SHKBP1-207ENST00000595631 GNAQP50148 359 aa15.99■□□□□ 0.15
SHKBP1-207ENST00000595631 ANAPC15P60006 121 aa15.99■□□□□ 0.15
SHKBP1-207ENST00000595631 SHISA4Q96DD7 197 aa15.99■□□□□ 0.15
SHKBP1-207ENST00000595631 TINF2Q9BSI4 451 aa15.99■□□□□ 0.15
SHKBP1-207ENST00000595631 AMNQ9BXJ7 453 aa15.99■□□□□ 0.15
SHKBP1-207ENST00000595631 HMX1Q9NP08 348 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-207ENST00000595631 PAK6Q9NQU5 681 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-207ENST00000595631 PDRG1Q9NUG6 133 aa15.99■□□□□ 0.15
SHKBP1-207ENST00000595631 CNTNAP5Q8WYK1 1306 aa15.98■□□□□ 0.15
SHKBP1-207ENST00000595631 PNMA6FA0A0J9YX94 578 aa15.98■□□□□ 0.15
SHKBP1-207ENST00000595631 GJB1P08034 283 aa15.98■□□□□ 0.15
SHKBP1-207ENST00000595631 CYBAP13498 195 aa15.98■□□□□ 0.15
SHKBP1-207ENST00000595631 RNF207Q6ZRF8 634 aa15.98■□□□□ 0.15
SHKBP1-207ENST00000595631 FBXL16Q8N461 479 aa15.98■□□□□ 0.15
SHKBP1-207ENST00000595631 RRP36Q96EU6 259 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-207ENST00000595631 LZTS2Q9BRK4 669 aa15.98■□□□□ 0.15
SHKBP1-207ENST00000595631 PNMA2Q9UL42 364 aa15.98■□□□□ 0.15
SHKBP1-207ENST00000595631 PCDHA1Q9Y5I3 950 aa15.98■□□□□ 0.15
SHKBP1-207ENST00000595631 EIF5BO60841 1220 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-207ENST00000595631 SNAI1O95863 264 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-207ENST00000595631 SMARCA1P28370 1054 aa15.97■□□□□ 0.15
SHKBP1-207ENST00000595631 CNGA1P29973 690 aa15.97■□□□□ 0.15
SHKBP1-207ENST00000595631 ADD1P35611 737 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-207ENST00000595631 METAP2P50579 478 aaKnown RBP eCLIP15.97■□□□□ 0.15
SHKBP1-207ENST00000595631 RPS6P62753 249 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-207ENST00000595631 FUT2Q10981 343 aa15.97■□□□□ 0.15
SHKBP1-207ENST00000595631 ANO1Q5XXA6 986 aa15.97■□□□□ 0.15
SHKBP1-207ENST00000595631 U2AF1L4Q8WU68 220 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-207ENST00000595631 IL17RAQ96F46 866 aa15.97■□□□□ 0.15
SHKBP1-207ENST00000595631 RBM28Q9NW13 759 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-207ENST00000595631 COL20A1Q9P218 1284 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms