RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 SERPINB2P05120 415 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 TSPY3P0CV98 308 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 TSPY8P0CW00 308 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 BTDP43251 543 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 SPAG1Q07617 926 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 PICALMQ13492 652 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 USP17L2Q6R6M4 530 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 TRAPPC11Q7Z392 1133 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 HEATR3Q7Z4Q2 680 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 OR8K1Q8NGG5 319 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 ZNF507Q8TCN5 953 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 LACRTQ9GZZ8 138 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 CD209Q9NNX6 404 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 DISC1Q9NRI5 854 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 A0A1B0GUL6 1792 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 RASSF10A6NK89 507 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 B4DLN1 442 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 GPIHBP1Q8IV16 184 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 GSPT2Q8IYD1 628 aaKnown RBP17.18■□□□□ 0.34
ZNF541-205ENST00000595558 AFF2P51816 1311 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 ZNF185O15231 689 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 KLRC4O43908 158 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 DDR1Q08345 913 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 CCDC122Q5T0U0 273 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 BLIDQ8IZY5 108 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 ANKRD20A12PQ8NF67 263 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 RASSF8Q8NHQ8 419 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 UBA5Q9GZZ9 404 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 PSD3Q9NYI0 1048 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 ARPP21Q9UBL0 812 aaPredicted RBP17.17■□□□□ 0.34
ZNF541-205ENST00000595558 LUC7L2Q9Y383 392 aaKnown RBP17.17■□□□□ 0.34
ZNF541-205ENST00000595558 DLEC1Q9Y238 1755 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 ACTN2P35609 894 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 MFSD14BQ5SR56 506 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.17■□□□□ 0.34
ZNF541-205ENST00000595558 MAD2L2Q9UI95 211 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 SCN7AQ01118 1682 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 LGALS16A8MUM7 142 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 H7C1D1 291 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 TUBB2AQ13885 445 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 INF2Q27J81 1249 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 GOLGA5Q8TBA6 731 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 RIN2Q8WYP3 895 aaPredicted RBP17.17■□□□□ 0.34
ZNF541-205ENST00000595558 DNAJC7Q99615 494 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 TMEM47Q9BQJ4 181 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 TUBB2BQ9BVA1 445 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 MYO1AQ9UBC5 1043 aa17.17■□□□□ 0.34
ZNF541-205ENST00000595558 LONP1P36776 959 aaKnown RBP17.16■□□□□ 0.34
ZNF541-205ENST00000595558 TRAPPC10P48553 1259 aa17.16■□□□□ 0.34
ZNF541-205ENST00000595558 CYP27A1Q02318 531 aa17.16■□□□□ 0.34
ZNF541-205ENST00000595558 TRIM14Q14142 442 aa17.16■□□□□ 0.34
ZNF541-205ENST00000595558 TRIM47Q96LD4 638 aa17.16■□□□□ 0.34
ZNF541-205ENST00000595558 RTFDC1Q9BY42 306 aaPredicted RBP17.16■□□□□ 0.34
ZNF541-205ENST00000595558 PLEKHA4Q9H4M7 779 aa17.16■□□□□ 0.34
ZNF541-205ENST00000595558 KCNQ5Q9NR82 932 aa17.16■□□□□ 0.34
ZNF541-205ENST00000595558 RMND1Q9NWS8 449 aa17.16■□□□□ 0.34
ZNF541-205ENST00000595558 PSMD14O00487 310 aa17.16■□□□□ 0.34
ZNF541-205ENST00000595558 RASA1P20936 1047 aa17.16■□□□□ 0.34
ZNF541-205ENST00000595558 GTF2IP78347 998 aa17.16■□□□□ 0.34
ZNF541-205ENST00000595558 ZNF444Q8N0Y2 327 aaPredicted RBP17.16■□□□□ 0.34
ZNF541-205ENST00000595558 HPS3Q969F9 1004 aa17.16■□□□□ 0.34
ZNF541-205ENST00000595558 PDE2AO00408 941 aaPredicted RBP17.15■□□□□ 0.34
ZNF541-205ENST00000595558 MYBL2P10244 700 aa17.15■□□□□ 0.34
ZNF541-205ENST00000595558 HSPA1LP34931 641 aa17.15■□□□□ 0.34
ZNF541-205ENST00000595558 DOK7Q18PE1 504 aa17.15■□□□□ 0.34
ZNF541-205ENST00000595558 DUSP9Q99956 384 aaKnown RBP17.15■□□□□ 0.34
ZNF541-205ENST00000595558 ZNF219Q9P2Y4 722 aaPredicted RBP17.15■□□□□ 0.34
ZNF541-205ENST00000595558 CAPN11Q9UMQ6 739 aa17.15■□□□□ 0.34
ZNF541-205ENST00000595558 PCDHAC2Q9Y5I4 1007 aa17.15■□□□□ 0.34
ZNF541-205ENST00000595558 EIF3JO75822 258 aaKnown RBP17.15■□□□□ 0.34
ZNF541-205ENST00000595558 SCNN1DP51172 638 aa17.15■□□□□ 0.34
ZNF541-205ENST00000595558 USP14P54578 494 aa17.15■□□□□ 0.34
ZNF541-205ENST00000595558 TTI2Q6NXR4 508 aa17.15■□□□□ 0.34
ZNF541-205ENST00000595558 DTHD1Q6ZMT9 781 aa17.15■□□□□ 0.34
ZNF541-205ENST00000595558 C10orf67Q8IYJ2 551 aa17.15■□□□□ 0.34
ZNF541-205ENST00000595558 PCP11498 1178 aaKnown RBP17.14■□□□□ 0.33
ZNF541-205ENST00000595558 SHROOM1Q2M3G4 852 aaPredicted RBP17.14■□□□□ 0.33
ZNF541-205ENST00000595558 SBK1Q52WX2 424 aa17.14■□□□□ 0.33
ZNF541-205ENST00000595558 ARL6IP4Q66PJ3 421 aaKnown RBP17.14■□□□□ 0.33
ZNF541-205ENST00000595558 WDR93Q6P2C0 686 aa17.14■□□□□ 0.33
ZNF541-205ENST00000595558 TEX11Q8IYF3 940 aa17.14■□□□□ 0.33
ZNF541-205ENST00000595558 WDR66Q8TBY9 1149 aa17.14■□□□□ 0.33
ZNF541-205ENST00000595558 SMCR8Q8TEV9 937 aaPredicted RBP17.14■□□□□ 0.33
ZNF541-205ENST00000595558 PCDHA6Q9UN73 950 aa17.14■□□□□ 0.33
ZNF541-205ENST00000595558 PCDHA4Q9UN74 947 aa17.14■□□□□ 0.33
ZNF541-205ENST00000595558 PCDHA8Q9Y5H6 950 aa17.14■□□□□ 0.33
ZNF541-205ENST00000595558 SAR1BQ9Y6B6 198 aa17.14■□□□□ 0.33
ZNF541-205ENST00000595558 PCNTO95613 3336 aa17.14■□□□□ 0.33
ZNF541-205ENST00000595558 PDS5AQ29RF7 1337 aaKnown RBP17.14■□□□□ 0.33
ZNF541-205ENST00000595558 FRMPD2Q68DX3 1309 aaPredicted RBP17.14■□□□□ 0.33
ZNF541-205ENST00000595558 MYO1CO00159 1063 aa17.14■□□□□ 0.33
ZNF541-205ENST00000595558 SYF2O95926 243 aaKnown RBP17.14■□□□□ 0.33
ZNF541-205ENST00000595558 PLEKP08567 350 aaPredicted RBP17.14■□□□□ 0.33
ZNF541-205ENST00000595558 TNNT3P45378 269 aaPredicted RBP17.14■□□□□ 0.33
ZNF541-205ENST00000595558 MRPS25P82663 173 aaKnown RBP17.14■□□□□ 0.33
ZNF541-205ENST00000595558 PROM2Q8N271 834 aa17.14■□□□□ 0.33
ZNF541-205ENST00000595558 CCDC148Q8NFR7 591 aa17.14■□□□□ 0.33
ZNF541-205ENST00000595558 HAUS4Q9H6D7 363 aa17.14■□□□□ 0.33
ZNF541-205ENST00000595558 FAM204AQ9H8W3 233 aa17.14■□□□□ 0.33
ZNF541-205ENST00000595558 MACROD2A1Z1Q3 448 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms