RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 POU3F3P20264 500 aaPredicted RBP11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 BEX3Q00994 111 aa11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 CNTN2Q02246 1040 aa11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 TMEM63BQ5T3F8 832 aa11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 CPXCR1Q8N123 301 aa11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 FAM133AQ8N9E0 248 aa11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 GMCL1P1Q8NEA9 526 aa11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 APPBP2Q92624 585 aa11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 KHSRPQ92945 711 aaKnown RBP eCLIP11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 NOC4LQ9BVI4 516 aaKnown RBP11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 WNT8AQ9H1J5 351 aa11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 ABHD16BQ9H3Z7 469 aa11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 DCTPP1Q9H773 170 aa11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 GNEQ9Y223 722 aaKnown RBP11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 SCN5AQ14524 2016 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 SOWAHBA6NEL2 793 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 FAM86C2PA6NEL3 165 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 EPOPA6NHQ4 379 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 MINDY4BA8MYZ0 360 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 GPAA1O43292 621 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 GTPBP6O43824 516 aaPredicted RBP11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 RAD21O60216 631 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 MS4A1P11836 297 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 ATP2A2P16615 1042 aaKnown RBP11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 KRT40Q6A162 431 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 ZSCAN25Q6NSZ9 544 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 CXCL17Q6UXB2 119 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 ARMCX2Q7L311 632 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 RASGRP2Q7LDG7 609 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 LRRC47Q8N1G4 583 aaKnown RBP11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 KIFC2Q96AC6 838 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 SEC62Q99442 399 aaKnown RBP11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 TRPV6Q9H1D0 765 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 SYNPO2Q9UMS6 1093 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 COG5Q9UP83 839 aa11.61□□□□□ -0.55
NOTCH3-202ENST00000595045 PLIN4Q96Q06 1357 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 ZBBXA8MT70 800 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 PATL2C9JE40 543 aaKnown RBP11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 CA3P07451 260 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 NOVP48745 357 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 SLC4A3P48751 1232 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 OAZ1P54368 228 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 ITGA7Q13683 1181 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 TTLL4Q14679 1199 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 TMEM67Q5HYA8 995 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 ALYREFQ86V81 257 aaKnown RBP11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 AMOTL1Q8IY63 956 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 CCDC144CPQ8IYA2 1237 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 RPUSD2Q8IZ73 545 aaKnown RBP11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 IFNL3Q8IZI9 196 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 CHST13Q8NET6 341 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 NEDD1Q8NHV4 660 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 OTUD7AQ8TE49 926 aaPredicted RBP11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 AGBL1Q96MI9 1066 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 CERS4Q9HA82 394 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 MKNK2Q9HBH9 465 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 INCENPQ9NQS7 918 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 FEM1BQ9UK73 627 aa11.6□□□□□ -0.55
NOTCH3-202ENST00000595045 TET1Q8NFU7 2136 aa11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 GREB1LQ9C091 1923 aaPredicted RBP11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 B4GALT4O60513 344 aa11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 ZBED4O75132 1171 aa11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 CABYRO75952 493 aa11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 SLFN13Q68D06 897 aa11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 ANKRD35Q8N283 1001 aa11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 PI4K2BQ8TCG2 481 aa11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 HLA-CQ95604 372 aa11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 DDRGK1Q96HY6 314 aa11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 SCLYQ96I15 445 aa11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 PURBQ96QR8 312 aaKnown RBP11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 A1CFQ9NQ94 594 aaKnown RBP11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 PDGFCQ9NRA1 345 aa11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 IL17RBQ9NRM6 502 aa11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 RCAN3Q9UKA8 241 aa11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.59□□□□□ -0.55
NOTCH3-202ENST00000595045 TTLL1O95922 423 aa11.58□□□□□ -0.56
NOTCH3-202ENST00000595045 BMP3P12645 472 aa11.58□□□□□ -0.56
NOTCH3-202ENST00000595045 SMPD1P17405 629 aa11.58□□□□□ -0.56
NOTCH3-202ENST00000595045 SNAP25P60880 206 aa11.58□□□□□ -0.56
NOTCH3-202ENST00000595045 TNFAIP2Q03169 654 aa11.58□□□□□ -0.56
NOTCH3-202ENST00000595045 FSCN1Q16658 493 aaKnown RBP11.58□□□□□ -0.56
NOTCH3-202ENST00000595045 MUM1L1Q5H9M0 696 aa11.58□□□□□ -0.56
NOTCH3-202ENST00000595045 TAPT1Q6NXT6 567 aa11.58□□□□□ -0.56
NOTCH3-202ENST00000595045 NOL8Q76FK4 1167 aaKnown RBP11.58□□□□□ -0.56
NOTCH3-202ENST00000595045 TLK2Q86UE8 772 aa11.58□□□□□ -0.56
NOTCH3-202ENST00000595045 GMCL1Q96IK5 515 aa11.58□□□□□ -0.56
NOTCH3-202ENST00000595045 CD320Q9NPF0 282 aa11.58□□□□□ -0.56
NOTCH3-202ENST00000595045 C5orf42Q9H799 3197 aa11.57□□□□□ -0.56
NOTCH3-202ENST00000595045 CFAP54Q96N23 3096 aa11.57□□□□□ -0.56
NOTCH3-202ENST00000595045 MYH4Q9Y623 1939 aa11.57□□□□□ -0.56
NOTCH3-202ENST00000595045 TMEM232C9JQI7 657 aa11.57□□□□□ -0.56
NOTCH3-202ENST00000595045 PI4K2BG5E9Z4 385 aa11.57□□□□□ -0.56
NOTCH3-202ENST00000595045 NMT2O60551 498 aa11.57□□□□□ -0.56
NOTCH3-202ENST00000595045 PLA2G6O60733 806 aa11.57□□□□□ -0.56
NOTCH3-202ENST00000595045 ARHGEF15O94989 841 aa11.57□□□□□ -0.56
NOTCH3-202ENST00000595045 PSMC6P62333 389 aa11.57□□□□□ -0.56
NOTCH3-202ENST00000595045 TFAP4Q01664 338 aa11.57□□□□□ -0.56
NOTCH3-202ENST00000595045 TAP1Q03518 808 aa11.57□□□□□ -0.56
NOTCH3-202ENST00000595045 ZMYM1Q5SVZ6 1142 aa11.57□□□□□ -0.56
NOTCH3-202ENST00000595045 ZNF444Q8N0Y2 327 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms