RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 MYLIPQ8WY64 445 aa26.77■■□□□ 1.88
SSBP4-203ENST00000593641 HELLSQ9NRZ9 838 aa26.77■■□□□ 1.88
SSBP4-203ENST00000593641 LCTP09848 1927 aa26.77■■□□□ 1.88
SSBP4-203ENST00000593641 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.76■■□□□ 1.87
SSBP4-203ENST00000593641 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.76■■□□□ 1.87
SSBP4-203ENST00000593641 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.76■■□□□ 1.87
SSBP4-203ENST00000593641 FOSL2P15408 326 aa26.76■■□□□ 1.87
SSBP4-203ENST00000593641 NKX3-2P78367 333 aa26.76■■□□□ 1.87
SSBP4-203ENST00000593641 BEX3Q00994 111 aa26.76■■□□□ 1.87
SSBP4-203ENST00000593641 RASGRP2Q7LDG7 609 aa26.76■■□□□ 1.87
SSBP4-203ENST00000593641 TLK2Q86UE8 772 aa26.76■■□□□ 1.87
SSBP4-203ENST00000593641 FAM126BQ8IXS8 530 aa26.76■■□□□ 1.87
SSBP4-203ENST00000593641 AP5M1Q9H0R1 490 aa26.76■■□□□ 1.87
SSBP4-203ENST00000593641 CYP39A1Q9NYL5 469 aa26.76■■□□□ 1.87
SSBP4-203ENST00000593641 VCANP13611 3396 aa26.75■■□□□ 1.87
SSBP4-203ENST00000593641 ALX1Q15699 326 aa26.75■■□□□ 1.87
SSBP4-203ENST00000593641 MUM1L1Q5H9M0 696 aa26.75■■□□□ 1.87
SSBP4-203ENST00000593641 NSMFQ6X4W1 530 aa26.75■■□□□ 1.87
SSBP4-203ENST00000593641 TMEM199Q8N511 208 aa26.75■■□□□ 1.87
SSBP4-203ENST00000593641 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.75■■□□□ 1.874e-8■□□□□ 9.1
SSBP4-203ENST00000593641 GNEQ9Y223 722 aaKnown RBP26.75■■□□□ 1.87
SSBP4-203ENST00000593641 CTAGE5O15320 804 aa26.74■■□□□ 1.87
SSBP4-203ENST00000593641 ZEB2O60315 1214 aa26.74■■□□□ 1.87
SSBP4-203ENST00000593641 CABYRO75952 493 aa26.74■■□□□ 1.87
SSBP4-203ENST00000593641 ICAM1P05362 532 aa26.74■■□□□ 1.87
SSBP4-203ENST00000593641 NOVP48745 357 aa26.74■■□□□ 1.87
SSBP4-203ENST00000593641 PDE1AP54750 535 aa26.74■■□□□ 1.87
SSBP4-203ENST00000593641 RRP12Q5JTH9 1297 aaKnown RBP26.74■■□□□ 1.87
SSBP4-203ENST00000593641 COL25A1Q9BXS0 654 aaPredicted RBP26.74■■□□□ 1.87
SSBP4-203ENST00000593641 DNAJB2P25686 324 aa26.73■■□□□ 1.87
SSBP4-203ENST00000593641 FSCN1Q16658 493 aaKnown RBP26.73■■□□□ 1.87
SSBP4-203ENST00000593641 MCMDC2Q4G0Z9 681 aa26.73■■□□□ 1.87
SSBP4-203ENST00000593641 CXCL17Q6UXB2 119 aa26.73■■□□□ 1.87
SSBP4-203ENST00000593641 FBXO16Q8IX29 292 aaPredicted RBP26.73■■□□□ 1.87
SSBP4-203ENST00000593641 CRBNQ96SW2 442 aa26.73■■□□□ 1.87
SSBP4-203ENST00000593641 PPP1R12CQ9BZL4 782 aa26.73■■□□□ 1.87
SSBP4-203ENST00000593641 ASTN1O14525 1302 aa26.72■■□□□ 1.87
SSBP4-203ENST00000593641 FGRP09769 529 aa26.72■■□□□ 1.87
SSBP4-203ENST00000593641 TOP1P11387 765 aaKnown RBP26.72■■□□□ 1.87
SSBP4-203ENST00000593641 EEPD1Q7L9B9 569 aa26.72■■□□□ 1.87
SSBP4-203ENST00000593641 FAM227BQ96M60 508 aa26.72■■□□□ 1.87
SSBP4-203ENST00000593641 RANBP17Q9H2T7 1088 aaKnown RBP26.72■■□□□ 1.87
SSBP4-203ENST00000593641 DYNC1LI2O43237 492 aaPredicted RBP26.71■■□□□ 1.87
SSBP4-203ENST00000593641 FGAP02671 866 aa26.71■■□□□ 1.87
SSBP4-203ENST00000593641 CSF2RAP15509 400 aa26.71■■□□□ 1.87
SSBP4-203ENST00000593641 SMPD1P17405 629 aa26.71■■□□□ 1.87
SSBP4-203ENST00000593641 HDAC1Q13547 482 aaPredicted RBP26.71■■□□□ 1.87
SSBP4-203ENST00000593641 SYDE2Q5VT97 1194 aa26.71■■□□□ 1.87
SSBP4-203ENST00000593641 IQSEC1Q6DN90 963 aa26.71■■□□□ 1.87
SSBP4-203ENST00000593641 PSRC1Q6PGN9 363 aaPredicted RBP26.71■■□□□ 1.87
SSBP4-203ENST00000593641 TICAM2Q86XR7 235 aa26.71■■□□□ 1.87
SSBP4-203ENST00000593641 VTA1Q9NP79 307 aa26.71■■□□□ 1.87
SSBP4-203ENST00000593641 A0A0D9SFI3 127 aa26.7■■□□□ 1.86
SSBP4-203ENST00000593641 SLC16A2P36021 539 aa26.7■■□□□ 1.86
SSBP4-203ENST00000593641 TMEM240Q5SV17 173 aa26.7■■□□□ 1.86
SSBP4-203ENST00000593641 TIFAQ96CG3 184 aa26.7■■□□□ 1.86
SSBP4-203ENST00000593641 TMEM47Q9BQJ4 181 aa26.7■■□□□ 1.86
SSBP4-203ENST00000593641 SEZ6LQ9BYH1 1024 aa26.7■■□□□ 1.86
SSBP4-203ENST00000593641 PDGFCQ9NRA1 345 aa26.7■■□□□ 1.86
SSBP4-203ENST00000593641 ADD3Q9UEY8 706 aaKnown RBP26.7■■□□□ 1.86
SSBP4-203ENST00000593641 Q9Y3F1 56 aa26.7■■□□□ 1.86
SSBP4-203ENST00000593641 DDX49Q9Y6V7 483 aaKnown RBP26.7■■□□□ 1.86
SSBP4-203ENST00000593641 ZMYM6O95789 1325 aa26.69■■□□□ 1.86
SSBP4-203ENST00000593641 CD4P01730 458 aa26.69■■□□□ 1.86
SSBP4-203ENST00000593641 ITGA7Q13683 1181 aa26.69■■□□□ 1.86
SSBP4-203ENST00000593641 TTBK2Q6IQ55 1244 aa26.69■■□□□ 1.86
SSBP4-203ENST00000593641 BTNL9Q6UXG8 535 aa26.69■■□□□ 1.86
SSBP4-203ENST00000593641 TCP11L1Q9NUJ3 509 aa26.69■■□□□ 1.86
SSBP4-203ENST00000593641 FRMPD2Q68DX3 1309 aaPredicted RBP26.68■■□□□ 1.86
SSBP4-203ENST00000593641 TRIM6-TRIM34B2RNG4 842 aa26.68■■□□□ 1.86
SSBP4-203ENST00000593641 HSPD1P10809 573 aaKnown RBP26.68■■□□□ 1.86
SSBP4-203ENST00000593641 TAPT1Q6NXT6 567 aa26.68■■□□□ 1.86
SSBP4-203ENST00000593641 KIAA1211Q6ZU35 1233 aa26.68■■□□□ 1.86
SSBP4-203ENST00000593641 SLC43A3Q8NBI5 491 aa26.68■■□□□ 1.86
SSBP4-203ENST00000593641 ACRP10323 421 aa26.67■■□□□ 1.86
SSBP4-203ENST00000593641 CYP2C18P33260 490 aa26.67■■□□□ 1.86
SSBP4-203ENST00000593641 BAATQ14032 418 aaPredicted RBP26.67■■□□□ 1.86
SSBP4-203ENST00000593641 C16orf59Q7L2K0 433 aa26.67■■□□□ 1.86
SSBP4-203ENST00000593641 MORC4Q8TE76 937 aa26.67■■□□□ 1.86
SSBP4-203ENST00000593641 PURBQ96QR8 312 aaKnown RBP26.67■■□□□ 1.86
SSBP4-203ENST00000593641 MTIF3Q9H2K0 278 aaKnown RBP26.67■■□□□ 1.86
SSBP4-203ENST00000593641 HIPK3Q9H422 1215 aa26.67■■□□□ 1.86
SSBP4-203ENST00000593641 ZNF576Q9H609 170 aa26.67■■□□□ 1.86
SSBP4-203ENST00000593641 GPCPD1Q9NPB8 672 aa26.67■■□□□ 1.86
SSBP4-203ENST00000593641 PNMA2Q9UL42 364 aa26.67■■□□□ 1.86
SSBP4-203ENST00000593641 CCDC171Q6TFL3 1326 aa26.66■■□□□ 1.86
SSBP4-203ENST00000593641 LOC102724159A0A0B4J2E5 919 aa26.66■■□□□ 1.86
SSBP4-203ENST00000593641 PTPDC1A2A3K4 754 aa26.66■■□□□ 1.86
SSBP4-203ENST00000593641 NFIBO00712 420 aa26.66■■□□□ 1.86
SSBP4-203ENST00000593641 PCP11498 1178 aaKnown RBP26.66■■□□□ 1.86
SSBP4-203ENST00000593641 PTGS1P23219 599 aa26.66■■□□□ 1.86
SSBP4-203ENST00000593641 ALDH5A1P51649 535 aaPredicted RBP26.66■■□□□ 1.86
SSBP4-203ENST00000593641 HAND2P61296 217 aa26.66■■□□□ 1.86
SSBP4-203ENST00000593641 NMIQ13287 307 aaPredicted RBP26.66■■□□□ 1.86
SSBP4-203ENST00000593641 GRIN2CQ14957 1233 aa26.66■■□□□ 1.86
SSBP4-203ENST00000593641 PWP2Q15269 919 aaKnown RBP26.66■■□□□ 1.86
SSBP4-203ENST00000593641 ZNF365Q70YC5 407 aa26.66■■□□□ 1.86
SSBP4-203ENST00000593641 ZNF589Q86UQ0 364 aaPredicted RBP26.66■■□□□ 1.86
SSBP4-203ENST00000593641 IL23AQ9NPF7 189 aa26.66■■□□□ 1.86
SSBP4-203ENST00000593641 PDHBP11177 359 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms