RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 RTEL1Q9NZ71 1219 aa13.22□□□□□ -0.29
CACNA1A-213ENST00000593267 PCDHA6Q9UN73 950 aa13.22□□□□□ -0.29
CACNA1A-213ENST00000593267 PCDHA8Q9Y5H6 950 aa13.22□□□□□ -0.29
CACNA1A-213ENST00000593267 PCDHA1Q9Y5I3 950 aa13.22□□□□□ -0.29
CACNA1A-213ENST00000593267 ZNF536O15090 1300 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 FAM205CA6NFA0 338 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 USP17L15C9J2P7 530 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 USP17L13C9JLJ4 530 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 USP17L11C9JVI0 530 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 USP17L18D6R9N7 530 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 USP17L22D6RA61 530 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 USP17L17D6RBQ6 530 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 USP17L19D6RCP7 530 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 USP17L20D6RJB6 530 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 YEATS4O95619 227 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 CLK2P49760 499 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 TOB1P50616 345 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 MLLT1Q03111 559 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 USP17L24Q0WX57 530 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 NOM1Q5C9Z4 860 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 TEX2Q8IWB9 1127 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 CUL5Q93034 780 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 HHIPL1Q96JK4 782 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 GLT8D2Q9H1C3 349 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 SLC38A10Q9HBR0 1119 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 TFIP11Q9UBB9 837 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 ADAMTS5Q9UNA0 930 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 CASP8AP2Q9UKL3 1982 aa13.21□□□□□ -0.29
CACNA1A-213ENST00000593267 PRPF40AO75400 957 aaKnown RBP13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 ICAM1P05362 532 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 HOXA7P31268 230 aaPredicted RBP13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 DSG3P32926 999 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 TRAPPC10P48553 1259 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 MOGSQ13724 837 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 USH1GQ495M9 461 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 TREML2Q5T2D2 321 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 ANO1Q5XXA6 986 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 CCDC174Q6PII3 467 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 PIK3AP1Q6ZUJ8 805 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 KRT25Q7Z3Z0 450 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 REXO1Q8N1G1 1221 aaKnown RBP13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 REPS2Q8NFH8 660 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 RASGRP4Q8TDF6 673 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 SLC10A4Q96EP9 437 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 WNK4Q96J92 1243 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 SPATA32Q96LK8 384 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 RCOR1Q9UKL0 485 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 PNMA2Q9UL42 364 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 NOL7Q9UMY1 257 aaKnown RBP13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 CLIC4Q9Y696 253 aa13.2□□□□□ -0.3
CACNA1A-213ENST00000593267 ABCB11O95342 1321 aa13.19□□□□□ -0.3
CACNA1A-213ENST00000593267 SMCHD1A6NHR9 2005 aa13.19□□□□□ -0.3
CACNA1A-213ENST00000593267 CCDC194A0A1B0GVG4 234 aa13.19□□□□□ -0.3
CACNA1A-213ENST00000593267 SPDYE16A6NNV3 312 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-213ENST00000593267 VWA5AO00534 786 aa13.19□□□□□ -0.3
CACNA1A-213ENST00000593267 OPLAHO14841 1288 aa13.19□□□□□ -0.3
CACNA1A-213ENST00000593267 MRPL12P52815 198 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-213ENST00000593267 COG2Q14746 738 aa13.19□□□□□ -0.3
CACNA1A-213ENST00000593267 GADL1Q6ZQY3 521 aa13.19□□□□□ -0.3
CACNA1A-213ENST00000593267 LINC00301Q8NCQ3 95 aa13.19□□□□□ -0.3
CACNA1A-213ENST00000593267 ATG4CQ96DT6 458 aa13.19□□□□□ -0.3
CACNA1A-213ENST00000593267 PSTPIP2Q9H939 334 aa13.19□□□□□ -0.3
CACNA1A-213ENST00000593267 AGTPBP1Q9UPW5 1226 aa13.19□□□□□ -0.3
CACNA1A-213ENST00000593267 MORC2Q9Y6X9 1032 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-213ENST00000593267 MEIS2O14770 477 aa13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 ATP2A1O14983 1001 aa13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 ZBED4O75132 1171 aa13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 TAL1P17542 331 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 OAZ1P54368 228 aa13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 HUNKP57058 714 aa13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 CEBPZQ03701 1054 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 NOGQ13253 232 aa13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 SNAPC2Q13487 334 aa13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 NBR1Q14596 966 aa13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 SLC39A14Q15043 492 aa13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 NONOQ15233 471 aaKnown RBP eCLIP13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 PTPAQ15257 358 aa13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 SF3A1Q15459 793 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 FASTKD5Q7L8L6 764 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 BIN2Q9UBW5 565 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 CCPG1Q9ULG6 757 aa13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 MRPL11Q9Y3B7 192 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-213ENST00000593267 MYH7BA7E2Y1 1941 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 PIK3CDO00329 1044 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 WNT7AO00755 349 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 GADD45BO75293 160 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 ZBTB48P10074 688 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 UBE2HP62256 183 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 GHRHRQ02643 423 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 AP3B2Q13367 1082 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 STK38Q15208 465 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 UBE2SQ16763 222 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 TTC38Q5R3I4 469 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 JAKMIP3Q5VZ66 844 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 MCTP2Q6DN12 878 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 GPAT2Q6NUI2 795 aa13.17□□□□□ -0.3
CACNA1A-213ENST00000593267 LBX2Q6XYB7 198 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms