RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 DEFB129Q9H1M3 183 aa21.23■□□□□ 0.99
HDAC5-212ENST00000593013 C6orf50Q9HD87 102 aa21.23■□□□□ 0.99
HDAC5-212ENST00000593013 PRPHP41219 470 aa21.22■□□□□ 0.99
HDAC5-212ENST00000593013 TNNI2P48788 182 aa21.22■□□□□ 0.99
HDAC5-212ENST00000593013 DPYDQ12882 1025 aa21.22■□□□□ 0.99
HDAC5-212ENST00000593013 ORC2Q13416 577 aaPredicted RBP21.22■□□□□ 0.99
HDAC5-212ENST00000593013 PNMA8AQ86V59 439 aaPredicted RBP21.22■□□□□ 0.99
HDAC5-212ENST00000593013 CDAN1Q8IWY9 1227 aa21.22■□□□□ 0.99
HDAC5-212ENST00000593013 IQUBQ8NA54 791 aa21.22■□□□□ 0.99
HDAC5-212ENST00000593013 ENOX1Q8TC92 643 aaKnown RBP21.22■□□□□ 0.99
HDAC5-212ENST00000593013 CPVLQ9H3G5 476 aa21.22■□□□□ 0.99
HDAC5-212ENST00000593013 PI4KBQ9UBF8 816 aa21.22■□□□□ 0.99
HDAC5-212ENST00000593013 TPM2P07951 284 aa21.21■□□□□ 0.99
HDAC5-212ENST00000593013 ERCC5P28715 1186 aaPredicted RBP21.21■□□□□ 0.99
HDAC5-212ENST00000593013 PDXDC2PQ6P474 469 aa21.21■□□□□ 0.99
HDAC5-212ENST00000593013 ZSCAN29Q8IWY8 852 aaPredicted RBP21.21■□□□□ 0.99
HDAC5-212ENST00000593013 ZNF784Q8NCA9 323 aaPredicted RBP21.21■□□□□ 0.99
HDAC5-212ENST00000593013 GSDMAQ96QA5 445 aa21.21■□□□□ 0.99
HDAC5-212ENST00000593013 PIGSQ96S52 555 aa21.21■□□□□ 0.99
HDAC5-212ENST00000593013 CBFA2T2O43439 604 aa21.21■□□□□ 0.99
HDAC5-212ENST00000593013 ZNF543Q08ER8 600 aa21.21■□□□□ 0.99
HDAC5-212ENST00000593013 LRRC47Q8N1G4 583 aaKnown RBP21.21■□□□□ 0.99
HDAC5-212ENST00000593013 CSRNP1Q96S65 589 aa21.21■□□□□ 0.99
HDAC5-212ENST00000593013 SMCO2A6NFE2 343 aa21.2■□□□□ 0.98
HDAC5-212ENST00000593013 ATP1A3P13637 1013 aa21.2■□□□□ 0.98
HDAC5-212ENST00000593013 INF2Q27J81 1249 aa21.2■□□□□ 0.98
HDAC5-212ENST00000593013 PPP1R18Q6NYC8 613 aa21.2■□□□□ 0.98
HDAC5-212ENST00000593013 DNAJC18Q9H819 358 aa21.2■□□□□ 0.98
HDAC5-212ENST00000593013 R3HCC1Q9Y3T6 440 aaKnown RBP21.2■□□□□ 0.98
HDAC5-212ENST00000593013 SLURP2P0DP57 97 aa21.19■□□□□ 0.98
HDAC5-212ENST00000593013 ZNF18P17022 549 aa21.19■□□□□ 0.98
HDAC5-212ENST00000593013 NONOQ15233 471 aaKnown RBP eCLIP21.19■□□□□ 0.98
HDAC5-212ENST00000593013 EAPPQ56P03 285 aaPredicted RBP21.19■□□□□ 0.98
HDAC5-212ENST00000593013 POTEIP0CG38 1075 aa21.18■□□□□ 0.98
HDAC5-212ENST00000593013 POTEJP0CG39 1038 aa21.18■□□□□ 0.98
HDAC5-212ENST00000593013 TXLNAP40222 546 aa21.18■□□□□ 0.98
HDAC5-212ENST00000593013 FMR1Q06787 632 aaKnown RBP eCLIP21.18■□□□□ 0.98
HDAC5-212ENST00000593013 DTHD1Q6ZMT9 781 aa21.18■□□□□ 0.98
HDAC5-212ENST00000593013 HOMER1Q86YM7 354 aa21.18■□□□□ 0.98
HDAC5-212ENST00000593013 CCDC150Q8NCX0 1101 aa21.18■□□□□ 0.98
HDAC5-212ENST00000593013 DCPSQ96C86 337 aaKnown RBP21.18■□□□□ 0.98
HDAC5-212ENST00000593013 TMEM60Q9H2L4 133 aa21.18■□□□□ 0.98
HDAC5-212ENST00000593013 FANCLQ9NW38 375 aa21.18■□□□□ 0.98
HDAC5-212ENST00000593013 GTPBP6O43824 516 aaPredicted RBP21.18■□□□□ 0.98
HDAC5-212ENST00000593013 CCZ1BP86790 482 aa21.18■□□□□ 0.98
HDAC5-212ENST00000593013 CCZ1P86791 482 aaPredicted RBP21.18■□□□□ 0.98
HDAC5-212ENST00000593013 MAP3K10Q02779 954 aa21.18■□□□□ 0.98
HDAC5-212ENST00000593013 GPATCH4Q5T3I0 446 aaKnown RBP21.18■□□□□ 0.98
HDAC5-212ENST00000593013 FILIP1Q7Z7B0 1213 aa21.18■□□□□ 0.98
HDAC5-212ENST00000593013 UBA5Q9GZZ9 404 aa21.18■□□□□ 0.98
HDAC5-212ENST00000593013 PPP2R3BQ9Y5P8 575 aa21.18■□□□□ 0.98
HDAC5-212ENST00000593013 FRMPD2Q68DX3 1309 aaPredicted RBP21.17■□□□□ 0.98
HDAC5-212ENST00000593013 AFMP43652 599 aa21.17■□□□□ 0.98
HDAC5-212ENST00000593013 CLEC10AQ8IUN9 316 aa21.17■□□□□ 0.98
HDAC5-212ENST00000593013 MKL1Q969V6 931 aa21.17■□□□□ 0.98
HDAC5-212ENST00000593013 MTMR8Q96EF0 704 aa21.17■□□□□ 0.98
HDAC5-212ENST00000593013 CCSER1Q9C0I3 900 aa21.17■□□□□ 0.98
HDAC5-212ENST00000593013 KCND1Q9NSA2 647 aa21.17■□□□□ 0.98
HDAC5-212ENST00000593013 TBC1D12O60347 775 aa21.16■□□□□ 0.98
HDAC5-212ENST00000593013 ARID5BQ14865 1188 aa21.16■□□□□ 0.98
HDAC5-212ENST00000593013 TATDN1Q6P1N9 297 aa21.16■□□□□ 0.98
HDAC5-212ENST00000593013 TMC6Q7Z403 805 aa21.16■□□□□ 0.98
HDAC5-212ENST00000593013 NEK8Q86SG6 692 aa21.16■□□□□ 0.98
HDAC5-212ENST00000593013 REXO1Q8N1G1 1221 aaKnown RBP21.16■□□□□ 0.98
HDAC5-212ENST00000593013 MED15Q96RN5 788 aa21.16■□□□□ 0.98
HDAC5-212ENST00000593013 HERC5Q9UII4 1024 aaKnown RBP21.16■□□□□ 0.98
HDAC5-212ENST00000593013 UBASH3AP57075 661 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 CUL4BQ13620 913 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 NBPF12Q5TAG4 269 aaPredicted RBP21.15■□□□□ 0.98
HDAC5-212ENST00000593013 PRAMEF18Q5VWM3 479 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 KRT26Q7Z3Y9 468 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 SULF1Q8IWU6 871 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 AK8Q96MA6 479 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 JMJD4Q9H9V9 463 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 VAT1LQ9HCJ6 419 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 DISC1Q9NRI5 854 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 NYAP2Q9P242 653 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 NFE2L3Q9Y4A8 694 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 PNMA6FA0A0J9YX94 578 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 FAM196BA6NMK8 535 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 OR52Z1P0C646 297 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 VSTM4Q8IW00 320 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 PRIMPOLQ96LW4 560 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 MTRQ99707 1265 aa21.15■□□□□ 0.98
HDAC5-212ENST00000593013 ADM5C9JUS6 153 aa21.14■□□□□ 0.97
HDAC5-212ENST00000593013 KIF3CO14782 793 aa21.14■□□□□ 0.97
HDAC5-212ENST00000593013 SERPINC1P01008 464 aa21.14■□□□□ 0.97
HDAC5-212ENST00000593013 ADCY7P51828 1080 aa21.14■□□□□ 0.97
HDAC5-212ENST00000593013 SEMA3FQ13275 785 aa21.14■□□□□ 0.97
HDAC5-212ENST00000593013 DLK2Q6UY11 383 aa21.14■□□□□ 0.97
HDAC5-212ENST00000593013 MYL1P05976 194 aa21.13■□□□□ 0.97
HDAC5-212ENST00000593013 SKILP12757 684 aa21.13■□□□□ 0.97
HDAC5-212ENST00000593013 KCNJ6P48051 423 aa21.13■□□□□ 0.97
HDAC5-212ENST00000593013 DNTTIP2Q5QJE6 756 aaKnown RBP21.13■□□□□ 0.97
HDAC5-212ENST00000593013 LDHDQ86WU2 507 aa21.13■□□□□ 0.97
HDAC5-212ENST00000593013 ADGRF4Q8IZF3 695 aa21.13■□□□□ 0.97
HDAC5-212ENST00000593013 KANSL2Q9H9L4 492 aa21.13■□□□□ 0.97
HDAC5-212ENST00000593013 MAGEF1Q9HAY2 307 aa21.13■□□□□ 0.97
HDAC5-212ENST00000593013 GPCPD1Q9NPB8 672 aa21.13■□□□□ 0.97
HDAC5-212ENST00000593013 PPP1R3GB7ZBB8 358 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms